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Organism related
Word Map for Organism Sorghum bicolor
- Sorghum bicolor
- millet
- cereal
- italica
- sugarcane
- oxime
- aestivum
- miliaceum
- dhurrin
- o-methyltransferase
- officinarum
- propinquum
- saccharum
- virgatum
- rondani
- distachyon
- foxtail
- triticum
- brachypodium
- trichocarpa
-
panicle
- setaria
- pennisetum
- sinapis
- hordeum
- hermonthica
- mungo
-
etiolated
-
johnsongrass
-
sudangrass
- secale
- striga
- lepidium
-
phytochrome
-
nadp-malic
- miscanthus
-
nadph-cytochrome
TaxTree of Organism Sorghum bicolor
Condensed Tree View
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EC NUMBER 
COMMENTARY 
-
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(1'S,5'S)-averufin biosynthesis
-
-
PWY-5954
(1,4)-beta-D-xylan degradation
-
-
PWY-6717
(9Z)-tricosene biosynthesis
-
-
PWY-7035
(aminomethyl)phosphonate degradation
-
-
PWY-7805
(R)-cysteate degradation
-
-
PWY-6642
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
(S)-reticuline biosynthesis I
-
-
PWY-3581
1,3-beta-D-glucan biosynthesis
-
-
PWY-6773
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,5-anhydrofructose degradation
-
-
PWY-6992
1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)
-
-
PWY-6362
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
-
-
PWY-4661
1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)
-
-
PWY-6372
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3)
-
-
PWY-6554
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-nitrotoluene degradation
-
-
PWY-5641
24-epi-campesterol, fucosterol, and clionasterol biosynthesis (diatoms)
-
-
PWY-8238
3-(4-hydroxyphenyl)pyruvate biosynthesis
-
-
PWY-5886
3-dehydroquinate biosynthesis II (archaea)
-
-
PWY-6160
3-hydroxypropanoate cycle
-
-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
4-aminobutanoate degradation V
-
-
PWY-5022
4-coumarate degradation (aerobic)
-
-
PWY-8002
4-coumarate degradation (anaerobic)
-
-
PWY-7046
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxy-3-prenylbenzoate biosynthesis
-
-
PWY-7303
4-hydroxybenzoate biosynthesis I (eukaryotes)
-
-
PWY-5754
4-hydroxybenzoate biosynthesis III (plants)
-
-
PWY-6435
5-deoxystrigol biosynthesis
-
-
PWY-7101
6-gingerol analog biosynthesis (engineered)
-
-
PWY-6920
abscisic acid biosynthesis
-
-
PWY-695
acetaldehyde biosynthesis I
-
-
PWY-6333
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
acetylene degradation (anaerobic)
-
-
P161-PWY
acrylonitrile degradation I
-
-
PWY-7308
adenosine ribonucleotides de novo biosynthesis
-
-
PWY-7219
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aldoxime degradation
-
-
P345-PWY
alpha-amyrin biosynthesis
-
-
PWY-5377
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
alpha-tomatine degradation
-
-
PWY18C3-5
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
ammonia oxidation II (anaerobic)
-
-
P303-PWY
amygdalin and prunasin degradation
-
-
PWY-6011
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
apigeninidin 5-O-glucoside biosynthesis
-
-
PWY-7253
arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)
-
-
PWY-7601
arachidonate biosynthesis V (8-detaturase, mammals)
-
-
PWY-7725
arachidonate metabolites biosynthesis
-
-
PWY-8397
Arg/N-end rule pathway (eukaryotic)
-
-
PWY-7799
aromatic glucosinolate activation
-
-
PWY-6684
aromatic polyketides biosynthesis
-
-
PWY-6316
arsenate detoxification I
-
-
PWY-8264
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
ascorbate glutathione cycle
-
-
PWY-2261
ascorbate recycling (cytosolic)
-
-
PWY-6370
ATP biosynthesis
-
-
PWY-7980
atromentin biosynthesis
-
-
PWY-7518
avenanthramide biosynthesis
-
-
PWY-8157
bacilysin biosynthesis
-
-
PWY-7626
baicalein degradation (hydrogen peroxide detoxification)
-
-
PWY-7214
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
-
-
PWY-6444
beta-D-glucuronide and D-glucuronate degradation
-
-
PWY-7247
betanidin degradation
-
-
PWY-5461
Bifidobacterium shunt
-
-
P124-PWY
bupropion degradation
-
-
PWY66-241
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C20 prostanoid biosynthesis
-
-
PWY66-374
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
-
-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
caffeoylglucarate biosynthesis
-
-
PWY-6673
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
camalexin biosynthesis
-
-
CAMALEXIN-SYN
capsaicin biosynthesis
-
-
PWY-5710
capsiconiate biosynthesis
-
-
PWY-6027
catechol degradation to 2-hydroxypentadienoate I
-
-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
-
-
PWY-5419
cellulose and hemicellulose degradation (cellulolosome)
-
-
PWY-6784
cellulose biosynthesis
-
-
PWY-1001
cellulose degradation II (fungi)
-
-
PWY-6788
chitin biosynthesis
-
-
PWY-6981
chitin deacetylation
-
-
PWY-7118
chitin degradation I (archaea)
-
-
PWY-6855
chitin degradation II (Vibrio)
-
-
PWY-6902
chitin degradation III (Serratia)
-
-
PWY-7822
chlorogenic acid biosynthesis I
-
-
PWY-6039
chlorogenic acid biosynthesis II
-
-
PWY-6040
chlorogenic acid degradation
-
-
PWY-6781
cholesterol biosynthesis (algae, late side-chain reductase)
-
-
PWY-8191
cholesterol biosynthesis (diatoms)
-
-
PWY-8239
cholesterol biosynthesis (plants, early side-chain reductase)
-
-
PWY18C3-1
cholesterol biosynthesis II (via 24,25-dihydrolanosterol)
-
-
PWY66-3
choline biosynthesis III
-
-
PWY-3561
chorismate biosynthesis from 3-dehydroquinate
-
-
PWY-6163
cinnamoyl-CoA biosynthesis
-
-
PWY-6457
CO2 fixation into oxaloacetate (anaplerotic)
-
-
PWYQT-4429
coenzyme M biosynthesis II
-
-
PWY-6643
coumarin biosynthesis (via 2-coumarate)
-
-
PWY-5176
coumarins biosynthesis (engineered)
-
-
PWY-7398
creatine phosphate biosynthesis
-
-
PWY-6158
cremeomycin biosynthesis
-
-
PWY-8296
curcuminoid biosynthesis
-
-
PWY-6432
cyanate degradation
cyanide degradation
-
-
P401-PWY
cyanide detoxification I
-
-
ASPSYNII-PWY
cyclic electron flow
-
-
PWY-8270
cytochrome c biogenesis (system I type)
-
-
PWY-8147
cytokinin-O-glucosides biosynthesis
-
-
PWY-2902
D-myo-inositol (1,4,5)-trisphosphate biosynthesis
-
-
PWY-6351
D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis
-
-
PWY-6366
D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis
-
-
PWY-6365
D-myo-inositol-5-phosphate metabolism
-
-
PWY-6367
D-sorbitol degradation I
-
-
PWY-4101
D-xylose degradation to ethylene glycol (engineered)
-
-
PWY-7178
degradation of aromatic, nitrogen containing compounds
-
-
detoxification of reactive carbonyls in chloroplasts
-
-
PWY-6786
dhurrin biosynthesis
-
-
PWY-861
dhurrin degradation
-
-
PWY-5976
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
di-myo-inositol phosphate biosynthesis
-
-
PWY-6664
diacylglycerol and triacylglycerol biosynthesis
-
-
TRIGLSYN-PWY
diethylphosphate degradation
-
-
PWY-5491
DIMBOA-glucoside activation
-
-
PWY-4441
dipicolinate biosynthesis
-
-
PWY-8088
diterpene phytoalexins precursors biosynthesis
divinyl ether biosynthesis II
-
-
PWY-5409
dolabralexins biosynthesis
-
-
PWY-7994
ectoine biosynthesis
-
-
P101-PWY
ent-kaurene biosynthesis I
-
-
PWY-5032
ephedrine biosynthesis
-
-
PWY-5883
ergosterol biosynthesis II
-
-
PWY-7154
erythritol biosynthesis I
-
-
PWY-8372
erythritol biosynthesis II
-
-
PWY-8373
erythromycin D biosynthesis
-
-
PWY-7106
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation IV
-
-
PWY66-162
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis IV (engineered)
-
-
PWY-7126
ethene biosynthesis V (engineered)
-
-
PWY-7124
fatty acid biosynthesis initiation (type I)
-
-
PWY-5966-1
fatty acid biosynthesis initiation (type II)
-
-
PWY-4381
Fe(II) oxidation
-
-
PWY-6692
ferulate and sinapate biosynthesis
-
-
PWY-5168
firefly bioluminescence
-
-
PWY-7913
flavonoid biosynthesis
-
-
PWY1F-FLAVSYN
flavonoid biosynthesis (in equisetum)
-
-
PWY-6787
flavonoid di-C-glucosylation
-
-
PWY-7897
flavonol biosynthesis
-
-
PWY-3101
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
formate to nitrite electron transfer
-
-
PWY0-1585
free phenylpropanoid acid biosynthesis
-
-
PWY-2181
fructan degradation
-
-
PWY-862
gibberellin biosynthesis III (early C-13 hydroxylation)
-
-
PWY-5035
gibberellin inactivation I (2beta-hydroxylation)
-
-
PWY-102
gliotoxin biosynthesis
-
-
PWY-7533
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucosinolate activation
-
-
PWY-5267
glucosylglycerol biosynthesis
-
-
PWY-7902
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glutathione-peroxide redox reactions
-
-
PWY-4081
glycerol degradation to butanol
-
-
PWY-7003
glycerol-3-phosphate shuttle
-
-
PWY-6118
glycine betaine biosynthesis III (plants)
-
-
PWY1F-353
glycine biosynthesis II
-
-
GLYCINE-SYN2-PWY
glycine cleavage
-
-
GLYCLEAV-PWY
glycogen biosynthesis I (from ADP-D-Glucose)
-
-
GLYCOGENSYNTH-PWY
glycogen biosynthesis II (from UDP-D-Glucose)
-
-
PWY-5067
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
PWY-7900
glycogen degradation I
-
-
GLYCOCAT-PWY
glycogen degradation II
-
-
PWY-5941
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
glyoxylate assimilation
-
-
PWY-5744
glyphosate degradation III
-
-
PWY-7807
gossypol biosynthesis
-
-
PWY-5773
grixazone biosynthesis
-
-
PWY-7153
heme degradation I
-
-
PWY-5874
heterolactic fermentation
-
-
P122-PWY
homocysteine and cysteine interconversion
-
-
PWY-801
hydrogen sulfide biosynthesis II (mammalian)
-
-
PWY66-426
hydroxylated fatty acid biosynthesis (plants)
-
-
PWY-6433
icosapentaenoate biosynthesis III (8-desaturase, mammals)
-
-
PWY-7724
icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)
-
-
PWY-7602
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (herbivore attack)
-
-
PWYQT-4476
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis III (bacteria)
-
-
PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
-
-
PWY-5025
indole-3-acetate biosynthesis V (bacteria and fungi)
-
-
PWY-5026
indole-3-acetate biosynthesis VI (bacteria)
-
-
TRPIAACAT-PWY
inulin degradation
-
-
PWY-8314
iron reduction and absorption
-
-
PWY-5934
isoflavonoid biosynthesis II
-
-
PWY-2083
jasmonic acid biosynthesis
-
-
PWY-735
juniperonate biosynthesis
-
-
PWY-7619
justicidin B biosynthesis
-
-
PWY-6824
kauralexin biosynthesis
-
-
PWY-6887
L-alanine biosynthesis II
-
-
ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation III
-
-
ALANINE-DEG3-PWY
L-alanine degradation IV
-
-
PWY1-2
L-alanine degradation V (oxidative Stickland reaction)
-
-
PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-arginine biosynthesis I (via L-ornithine)
-
-
ARGSYN-PWY
L-arginine biosynthesis II (acetyl cycle)
-
-
ARGSYNBSUB-PWY
L-arginine biosynthesis III (via N-acetyl-L-citrulline)
-
-
PWY-5154
L-arginine biosynthesis IV (archaea)
-
-
PWY-7400
L-arginine degradation II (AST pathway)
-
-
AST-PWY
L-arginine degradation X (arginine monooxygenase pathway)
-
-
ARGDEG-V-PWY
L-ascorbate degradation II (bacterial, aerobic)
-
-
PWY-6961
L-ascorbate degradation III
-
-
PWY-6960
L-asparagine degradation III (mammalian)
-
-
ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
-
-
ASPARTATESYN-PWY
L-aspartate degradation I
-
-
ASPARTATE-DEG1-PWY
L-aspartate degradation II (aerobic)
-
-
PWY-8291
L-aspartate degradation III (anaerobic)
-
-
PWY-8294
L-carnitine degradation II
-
-
PWY-3641
L-citrulline biosynthesis
-
-
CITRULBIO-PWY
L-cysteine biosynthesis III (from L-homocysteine)
-
-
HOMOCYSDEGR-PWY
L-dopa and L-dopachrome biosynthesis
-
-
PWY-6481
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation II
-
-
GLUTDEG-PWY
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
-
-
PWY-8190
L-glutamine biosynthesis I
-
-
GLNSYN-PWY
L-glutamine degradation II
-
-
GLUTAMINEFUM-PWY
L-histidine degradation V
-
-
PWY-5031
L-homoserine biosynthesis
-
-
HOMOSERSYN-PWY
L-isoleucine biosynthesis I (from threonine)
-
-
ILEUSYN-PWY
L-isoleucine biosynthesis II
-
-
PWY-5101
L-isoleucine biosynthesis III
-
-
PWY-5103
L-isoleucine biosynthesis IV
-
-
PWY-5104
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-lysine biosynthesis I
-
-
DAPLYSINESYN-PWY
L-lysine biosynthesis II
-
-
PWY-2941
L-lysine biosynthesis III
-
-
PWY-2942
L-lysine biosynthesis VI
-
-
PWY-5097
L-lysine degradation XI
-
-
LYSINE-DEG1-PWY
L-malate degradation II
-
-
PWY-7686
L-methionine biosynthesis IV
-
-
PWY-7977
L-methionine degradation III
-
-
PWY-5082
L-Ndelta-acetylornithine biosynthesis
-
-
PWY-6922
L-ornithine biosynthesis II
-
-
ARGININE-SYN4-PWY
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine biosynthesis II
-
-
PWY-3462
L-phenylalanine biosynthesis III (cytosolic, plants)
-
-
PWY-7432
L-phenylalanine degradation II (anaerobic)
-
-
ANAPHENOXI-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
-
-
PWY-8014
L-proline biosynthesis I (from L-glutamate)
-
-
PROSYN-PWY
L-serine biosynthesis II
-
-
PWY-8011
L-tryptophan degradation IV (via indole-3-lactate)
-
-
TRPKYNCAT-PWY
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation VIII (to tryptophol)
-
-
PWY-5081
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
PWY-6307
L-tryptophan degradation XIII (reductive Stickland reaction)
-
-
PWY-8017
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine biosynthesis II
-
-
PWY-3461
L-tyrosine biosynthesis III
-
-
PWY-6120
L-tyrosine degradation I
-
-
TYRFUMCAT-PWY
L-tyrosine degradation II
-
-
PWY-5151
L-tyrosine degradation III
-
-
PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
-
-
PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
-
-
PWY-8016
L-valine biosynthesis
-
-
VALSYN-PWY
L-valine degradation II
-
-
PWY-5057
lanosterol biosynthesis
-
-
PWY-6132
leucodelphinidin biosynthesis
-
-
PWY-5152
leucopelargonidin and leucocyanidin biosynthesis
-
-
PWY1F-823
linamarin degradation
-
-
PWY-3121
linoleate metabolites biosynthesis
-
-
PWY-8395
linustatin bioactivation
-
-
PWY-7091
lipid A-core biosynthesis (E. coli K-12)
-
-
LIPA-CORESYN-PWY
lotaustralin degradation
-
-
PWY-6002
luteolin biosynthesis
-
-
PWY-5060
luteolin triglucuronide degradation
-
-
PWY-7445
luteolinidin 5-O-glucoside biosynthesis
-
-
PWY-7252
lychnose and isolychnose biosynthesis
-
-
PWY-6524
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
manganese oxidation I
-
-
PWY-6591
mangrove triterpenoid biosynthesis
-
-
PWY-6109
mannitol cycle
-
-
PWY-6531
matairesinol biosynthesis
-
-
PWY-5466
melatonin degradation I
-
-
PWY-6398
Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
PWY-6146
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methylaspartate cycle
methylglyoxal degradation I
-
-
PWY-5386
methylglyoxal degradation VIII
-
-
PWY-5386-1
mixed acid fermentation
-
-
FERMENTATION-PWY
mucin core 3 and core 4 O-glycosylation
-
-
PWY-7435
mycothiol biosynthesis
-
-
PWY1G-0
myo-inositol biosynthesis
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
naphthalene degradation (aerobic)
-
-
PWY-5427
naringenin biosynthesis (engineered)
-
-
PWY-7397
neolinustatin bioactivation
-
-
PWY-7092
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitrogen fixation I (ferredoxin)
-
-
N2FIX-PWY
nitrogen remobilization from senescing leaves
-
-
PWY-6549
nocardicin A biosynthesis
-
-
PWY-7797
noradrenaline and adrenaline degradation
-
-
PWY-6342
norspermidine biosynthesis
-
-
PWY-6562
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
o-diquinones biosynthesis
-
-
PWY-6752
oleandomycin activation/inactivation
-
-
PWY-6972
oleate biosynthesis II (animals and fungi)
-
-
PWY-5996
oxalate degradation IV
-
-
PWY-6697
palmitate biosynthesis I (type I fatty acid synthase)
-
-
PWY-5994
palmitoleate biosynthesis IV (fungi and animals)
-
-
PWY3O-1801
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
pectin degradation I
-
-
PWY-7246
pectin degradation II
-
-
PWY-7248
pentachlorophenol degradation
-
-
PCPDEG-PWY
pentacyclic triterpene biosynthesis
-
-
PWY-7251
pentose phosphate pathway (non-oxidative branch) I
-
-
NONOXIPENT-PWY
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
pentose phosphate pathway (partial)
-
-
P21-PWY
periplasmic disulfide bond formation
-
-
PWY0-1599
phaselate biosynthesis
-
-
PWY-6320
phenolic malonylglucosides biosynthesis
-
-
PWY-6930
phenylethanol biosynthesis
-
-
PWY-5751
phenylpropanoid biosynthesis
-
-
PWY-361
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
phenylpropanoids methylation (ice plant)
-
-
PWY-7498
pheomelanin biosynthesis
-
-
PWY-7917
phloridzin biosynthesis
-
-
PWY-6515
phosphate acquisition
-
-
PWY-6348
phosphatidate biosynthesis (yeast)
-
-
PWY-7411
phosphatidate metabolism, as a signaling molecule
-
-
PWY-7039
phosphatidylinositol biosynthesis I (bacteria)
-
-
PWY-6580
phospholipases
-
-
LIPASYN-PWY
photorespiration I
-
-
PWY-181
photorespiration II
-
-
PWY-8362
photorespiration III
-
-
PWY-8363
photosynthesis light reactions
-
-
PWY-101
phytate degradation I
-
-
PWY-4702
phytol degradation
-
-
PWY66-389
phytosterol biosynthesis (plants)
-
-
PWY-2541
pinobanksin biosynthesis
-
-
PWY-5059
plasmalogen biosynthesis I (aerobic)
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
plastoquinol-9 biosynthesis I
-
-
PWY-1581
platensimycin biosynthesis
-
-
PWY-8179
protective electron sinks in the thylakoid membrane (PSII to PTOX)
-
-
PWY1YI0-7
protein ubiquitination
-
-
PWY-7511
pyruvate fermentation to (R)-acetoin I
-
-
PWY-5938
pyruvate fermentation to (R)-acetoin II
-
-
PWY-5939
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to (S)-acetoin
-
-
PWY-6389
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to acetate IV
-
-
PWY-5485
pyruvate fermentation to butanol I
-
-
PWY-6583
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive monocarboxylic acid cycle
-
-
PWY-5493
reductive TCA cycle I
-
-
P23-PWY
resveratrol biosynthesis
-
-
PWY-84
retinol biosynthesis
-
-
PWY-6857
rosmarinic acid biosynthesis I
-
-
PWY-5048
Rubisco shunt
-
-
PWY-5723
salidroside biosynthesis
-
-
PWY-6802
salinosporamide A biosynthesis
-
-
PWY-6627
salvigenin biosynthesis
-
-
PWY-7325
sciadonate biosynthesis
-
-
PWY-6598
scopoletin biosynthesis
-
-
PWY-6792
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
serotonin degradation
-
-
PWY-6313
sesamin biosynthesis
-
-
PWY-5469
sorgoleone biosynthesis
-
-
PWY-5987
spermidine biosynthesis II
-
-
PWY-6559
sphingolipid biosynthesis (plants)
-
-
PWY-5129
stachyose biosynthesis
-
-
PWY-5337
stachyose degradation
-
-
PWY-6527
starch biosynthesis
-
-
PWY-622
starch degradation I
-
-
PWY-842
starch degradation II
-
-
PWY-6724
starch degradation III
-
-
PWY-6731
starch degradation V
-
-
PWY-6737
stearate biosynthesis I (animals)
-
-
PWY-5972
stellariose and mediose biosynthesis
-
-
PWY-6525
streptorubin B biosynthesis
-
-
PWY1A0-6120
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sucrose degradation I (sucrose phosphotransferase)
-
-
SUCUTIL-PWY
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation IV (sucrose phosphorylase)
-
-
PWY-5384
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sucrose degradation VII (sucrose 3-dehydrogenase)
-
-
SUCROSEUTIL2-PWY
sulfolactate degradation III
-
-
PWY-6638
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
superpathway of scopolin and esculin biosynthesis
-
-
PWY-7186
syringetin biosynthesis
-
-
PWY-5391
taurine biosynthesis III
-
-
PWY-8359
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle VIII (Chlamydia)
-
-
TCA-1
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
trans-caffeate degradation (aerobic)
-
-
PWY-8003
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
trehalose biosynthesis V
-
-
PWY-2661
triacylglycerol degradation
-
-
LIPAS-PWY
tricin biosynthesis
-
-
PWY-7995
tRNA processing
-
-
PWY0-1479
type I lipoteichoic acid biosynthesis (S. aureus)
-
-
PWY-7817
UDP-alpha-D-glucose biosynthesis
-
-
PWY-7343
ultra-long-chain fatty acid biosynthesis
-
-
PWY-8041
umbelliferone biosynthesis
-
-
PWY-6982
UMP biosynthesis I
-
-
PWY-5686
UMP biosynthesis II
-
-
PWY-7790
UMP biosynthesis III
-
-
PWY-7791
urea degradation II
-
-
PWY-5704
vancomycin resistance I
-
-
PWY-6454
vanillin biosynthesis I
-
-
PWY-5665
very long chain fatty acid biosynthesis I
-
-
PWY-5080
very long chain fatty acid biosynthesis II
-
-
PWY-7036
vicianin bioactivation
-
-
PWY-7093
vitamin E biosynthesis (tocopherols)
-
-
PWY-1422
vitamin K-epoxide cycle
xanthohumol biosynthesis
-
-
PWY-5135
xanthommatin biosynthesis
-
-
PWY-8249
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
zymosterol biosynthesis
-
-
PWY-6074
cyanate degradation
-
-
CYANCAT-PWY
diterpene phytoalexins precursors biosynthesis
-
-
PWY-2981
methylaspartate cycle
-
-
PWY-6728
myo-inositol biosynthesis
-
-
PWY-2301
suberin monomers biosynthesis
-
-
PWY-1121
vitamin K-epoxide cycle
-
-
PWY-7999
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
3556, 4329, 4468, 4488, 5826, 33093, 34334, 34720, 35335, 37440, 81096, 134736, 208511, 209768, 285331, 285332, 285333, 287385, 287395, 287413, 287425, 287426, 348459, 390078, 390080, 390081, 390781, 390788, 488898, 638187, 638655, 641902, 650926, 651012, 655709, 660383, 660777, 672414, 676577, 682535, 689769, 689867, 699256, 700832, 704892, 706331, 711596, 713231, 713233, 713320, 719801, 722632, 723366, 731012, 734158, 739318, 739333, 742205, 742602, 742917, 743405, 747158, 748479, 748484, 749295, 758161, 759921, 762109, 765631
-
-
-
348459, 390079, 390081, 650107, 653018, 660217, 660383, 700832, 716549, 733441, 734970, 735842, 736574, 737024, 738563, 739318, 739339, 739341, 739696, 742597, 743405, 743501, 745637, 748327, 748991, 758038, 759302, 762157, 762189, 765652
A8QW53, C5X6I4, C5X951, C5XAI0, C5XC49, C5XK17, C5XWH8, C5XWV7, C5XXB7, C5XXT8, C5XXT9, C5XYZ9, C5YCD6, C5YH12, C5YHI2, C5YK81, C5YLL4, C5YYU0, C5Z316, C5Z4W3, O48958, P52708, Q43135
UniProt
F3'H1; i.e. Sorghum vulgare, 3 genes F3'H1, F3'H2, and F3'H3
SwissProt
F3'H2; i.e. Sorghum vulgare, 3 genes F3'H1, F3'H2, and F3'H3
SwissProt
F3'H3; i.e. Sorghum vulgare, 3 genes F3'H1, F3'H2, and F3'H3
SwissProt
i.e. Sorghum vulgare
-
-
lines B 9307, B Tx630, B TxARG1, B Wheatland, R Tx2907, and R Tx430
UniProt
study on enzyme activity in drought tolerant and drought susceptible cultivars. In drought tolerant cultivars, significant water stress increases leaf enzyme activity, whereas in drought-susceptible cultivar enzyme activity decreases in response to drought
-
-
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
additional information
PPC3 is the most abundant isozyme of the developing seed, and of the embryo and the aleurone layer of germinating seeds
Bmr6 expression in young internodes is significantly higher than CAD4 for all genotypes
Bmr6 expression in young internodes is significantly higher than CAD4 for all genotypes, but only 4fold to 5fold higher in bmr6 and bmr6 bmr12 internodes. Bmr6 expression is significantly decreased in bmr6 and bmr6 bmr12 compared to the wild-type and bmr12, 20fold and 15fold, respectively
-
3551, 4488, 4892, 34720, 35335, 134736, 209768, 287426, 680658, 682273, 684408, 685702, 699256, 704892, 706331, 713233, 713320, 716576, 725122, 736574, 736976, 739333, 740494, 740500, 742597, 743405, 759921, 761338, 765790
-
activity and protein level of phosphoenolpyruvate carboxylase in both leaves and roots of sorghum plants increase progressively with increasing external nitrogen concentration
-
presence of ammonium increases the phosphorylation state of PEPC and PEPC kinase activity in sorghum leaves, both in light and in the dark
the site of dhurrin synthesis shifts from leaves to stem during plant development. At all stages, the content of dhurrin correlates well with the activity of the two biosynthetic enzymes, CYP79A1 and CYP71E1, and with the protein and mRNA level for the two enzymes
-
71% of enzyme activity in epidermal and 29% in mesophyllic tissue
-
induced in Sorghum mesocotyls following inoculation with Cochliobolus heterotrophus and Colletotrichum sublineolum
-
activity and protein level of phosphoenolpyruvate carboxylase in both leaves and roots of sorghum plants increase progressively with increasing external nitrogen concentration
-
presence of ammonium increases PEPC activity and the amount of monoubiquitinated PEPC
endosperm and embryo, activity exhibits a late onset with a peak of transcription at around 22 days after pollination
extensive transcript abundance of isoform PPC2 throughout the entire life cycle of the seed. SbPPC2 shows maximal transcript abundance at 24-48 h post-imbibition and then decreases
extensive transcript abundance of isoform PPC3 throughout the entire life cycle of the seed. PPC3 is the most abundant isozyme of the developing seed, and of the embryo and the aleurone layer of germinating seeds. PPC3 transcript levels are at maximum at the beginning of seed development, during the period of cellularization
high levels of transcripts during early development, i.e. stage I
-
3556, 4889, 4890, 4891, 4893, 4894, 4895, 4900, 37321, 285331, 285332, 285344, 348459, 390081, 390788, 648476, 653465, 675632, 684408, 713256, 725122
the site of dhurrin synthesis shifts from leaves to stem during plant development. At all stages, the content of dhurrin correlates well with the activity of the two biosynthetic enzymes, CYP79A1 and CYP71E1, and with the protein and mRNA level for the two enzymes
additional information
no expression of F3'H3 in mesocotyl
additional information
polymorphic restriction site is present in the near-isogenic lines Atlas bmr6, RTx430 bmr6, and Wheatland bmr6 and is absent from wild-type Atlas, RTx430, and Wheatland
additional information
the highest expression levels of the three CCR genes occur in stem. The expression levels of SbCCR1 and SbCCR2-2 in stem and root are higher than in spikelet and leaf, but those of SbCCR2-1 in stem and spikelet are higher than in leaf and root. The gene copy number of SbCCR1 is significantly higher than those of SbCCR2-1 and SbCCR2-2 in root, leaf, stem and spikelet, especially in stem
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
UGT85B1 is found mainly in the soluble stroma fraction
transient expression of a fluorescent fusion protein in Sorghum bicolor epidermal cells as monitored by confocal laser scanning microscopy shows that UGT85B1-YFP in the presence of CYP79A1 and CYP71E1 shifts towards the surface of the ER membrane in the periphery of biosynthetic active cells
-
-
-
from bundle sheath cells or mesophyll cells. In all the C4 species, the chloroplasts of bundle sheath cells in control plants show a typical structure of NADP-ME type whose thylakoids are scarcely appressed and grana are rudimentary, while in bundle sheath cell chloroplasts in the salt-treated plants, almost no structural damage is observed, overview
transient expression of a fluorescent fusion protein in Sorghum bicolor epidermal cells as monitored by confocal laser scanning microscopy shows that UGT85B1-YFP accumulates in the cytoplasm in the absence of CYP79A1 or CYP71E1
LINKS TO OTHER DATABASES (specific for Sorghum bicolor)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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