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Organism related
Word Map for Organism Rhodococcus ruber
- Rhodococcus ruber
- hydratase
- opacus
- nitril
- erythropolis
- acrylonitrile
-
syngeneic
- fibrosarcoma
- rhodochrous
-
intrapleural
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oil-attached
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bcg-cws
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tumoricidal
TaxTree of Organism Rhodococcus ruber
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EC NUMBER 
COMMENTARY 
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preliminary BRENDA-supplied EC number
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
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PWY-7216
(S)-propane-1,2-diol degradation
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PWY-7013
1,3-dimethylbenzene degradation to 3-methylbenzoate
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PWY-5428
1,4-dimethylbenzene degradation to 4-methylbenzoate
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PWY-5429
1,5-anhydrofructose degradation
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PWY-6992
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
2-methylpropene degradation
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PWY-7778
2-nitrotoluene degradation
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PWY-5641
2-oxoglutarate decarboxylation to succinyl-CoA
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PWY-5084
2-oxoisovalerate decarboxylation to isobutanoyl-CoA
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PWY-5046
3-chlorotoluene degradation II
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PWY-6104
3-methylbutanol biosynthesis (engineered)
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PWY-6871
4-chlorobenzoate degradation
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PWY-6215
4-hydroxy-2-nonenal detoxification
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PWY-7112
4-methylcatechol degradation (ortho cleavage)
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PWY-6185
4-oxopentanoate degradation
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PWY-7948
acetaldehyde biosynthesis I
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PWY-6333
acetaldehyde biosynthesis II
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PWY-6330
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acetyl-CoA fermentation to butanoate
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PWY-5676
acetylene degradation (anaerobic)
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P161-PWY
acrylonitrile degradation I
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PWY-7308
aldoxime degradation
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P345-PWY
Amaryllidacea alkaloids biosynthesis
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PWY-7826
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
androstenedione degradation I (aerobic)
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PWY-6944
androstenedione degradation II (anaerobic)
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PWY-8152
arachidonate metabolites biosynthesis
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PWY-8397
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
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PWY-6444
benzoate biosynthesis III (CoA-dependent, non-beta-oxidative)
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PWY-6446
benzoate degradation I (aerobic)
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PWY-2503
beta-D-glucuronide and D-glucuronate degradation
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PWY-7247
biphenyl degradation
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PWY5F9-12
bupropion degradation
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PWY66-241
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
camalexin biosynthesis
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CAMALEXIN-SYN
carbaryl degradation
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PWY-8111
catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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PWY-5419
catechol degradation to beta-ketoadipate
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CATECHOL-ORTHO-CLEAVAGE-PWY
chlorinated phenols degradation
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PWY-6197
chlorpyrifos degradation
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PWY-8065
cholesterol degradation to androstenedione I (cholesterol oxidase)
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PWY-6945
cyanide detoxification II
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PWY-7142
cyclohexanol degradation
D-phenylglycine degradation
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PWY-8161
D-xylose degradation to ethylene glycol (engineered)
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PWY-7178
degradation of aromatic, nitrogen containing compounds
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detoxification of reactive carbonyls in chloroplasts
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PWY-6786
diethylphosphate degradation
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PWY-5491
dimethyl sulfide biosynthesis from methionine
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PWY-7793
diphenyl ethers degradation
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PWY-7747
docosahexaenoate metabolites biosynthesis
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PWY-8400
erythritol biosynthesis I
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PWY-8372
erythritol biosynthesis II
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PWY-8373
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol degradation IV
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PWY66-162
ethanolamine utilization
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PWY0-1477
ethene and chloroethene degradation
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PWY-7776
ethene biosynthesis III (microbes)
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PWY-6854
ethylmalonyl-CoA pathway
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PWY-5741
farnesylcysteine salvage pathway
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PWY-6577
firefly bioluminescence
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PWY-7913
flavin biosynthesis I (bacteria and plants)
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RIBOSYN2-PWY
flavin biosynthesis II (archaea)
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PWY-6167
flavin biosynthesis III (fungi)
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PWY-6168
formate oxidation to CO2
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PWY-1881
gliotoxin biosynthesis
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PWY-7533
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glycine biosynthesis II
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-
GLYCINE-SYN2-PWY
glycine cleavage
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GLYCLEAV-PWY
gossypol biosynthesis
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PWY-5773
heterolactic fermentation
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P122-PWY
icosapentaenoate metabolites biosynthesis
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PWY-8399
indole glucosinolate activation (herbivore attack)
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PWYQT-4476
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
indole-3-acetate biosynthesis V (bacteria and fungi)
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PWY-5026
isoprene degradation
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PWY-7777
justicidin B biosynthesis
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PWY-6824
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-dopa and L-dopachrome biosynthesis
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PWY-6481
L-isoleucine degradation II
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PWY-5078
L-leucine degradation III
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PWY-5076
L-methionine degradation III
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PWY-5082
L-phenylalanine degradation III
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PWY-5079
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tryptophan degradation X (mammalian, via tryptamine)
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PWY-6307
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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PWY-5057
linoleate metabolites biosynthesis
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PWY-8395
long chain fatty acid ester synthesis (engineered)
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PWY-6873
luteolin triglucuronide degradation
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PWY-7445
mandelate degradation I
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PWY-1501
maresin biosynthesis
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PWY-8356
matairesinol biosynthesis
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PWY-5466
melatonin degradation I
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PWY-6398
methanol oxidation to formaldehyde IV
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PWY-5506
methyl indole-3-acetate interconversion
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PWY-6303
methyl parathion degradation
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PWY-5489
methylsalicylate degradation
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PWY18C3-24
mixed acid fermentation
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FERMENTATION-PWY
naphthalene degradation (aerobic)
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PWY-5427
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
nocardicin A biosynthesis
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PWY-7797
noradrenaline and adrenaline degradation
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PWY-6342
o-diquinones biosynthesis
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PWY-6752
octane oxidation
oxalate degradation III
-
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PWY-6696
oxalate degradation VI
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PWY-7985
paraoxon degradation
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PWY-5490
parathion degradation
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PARATHION-DEGRADATION-PWY
pentachlorophenol degradation
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PCPDEG-PWY
phenol degradation I (aerobic)
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PWY-5418
phenylethanol biosynthesis
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PWY-5751
pheomelanin biosynthesis
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PWY-7917
phosphate acquisition
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PWY-6348
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
phytol degradation
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PWY66-389
poly-hydroxy fatty acids biosynthesis
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PWY-6710
polyhydroxybutanoate biosynthesis
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PWY1-3
polyhydroxydecanoate biosynthesis
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PWY-6657
propene degradation
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PWY-5534
purine nucleobases degradation I (anaerobic)
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P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
pyruvate decarboxylation to acetyl CoA I
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PYRUVDEHYD-PWY
pyruvate fermentation to acetate II
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PWY-5482
pyruvate fermentation to acetate V
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PWY-5537
pyruvate fermentation to acetate VIII
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PWY-5768
pyruvate fermentation to acetoin III
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PWY3O-440
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
queuosine biosynthesis I (de novo)
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PWY-6700
reactive oxygen species degradation
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DETOX1-PWY-1
retinol biosynthesis
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PWY-6857
salicin biosynthesis
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PWY-6766
salicortin biosynthesis
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PWY-6763
salidroside biosynthesis
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PWY-6802
seleno-amino acid detoxification and volatilization I
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PWY-6931
seleno-amino acid detoxification and volatilization III
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PWY-6933
serotonin degradation
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PWY-6313
sesamin biosynthesis
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PWY-5469
superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass
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GLYCOLYSIS-TCA-GLYOX-BYPASS
superpathway of methylsalicylate metabolism
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PWY18C3-25
taurine biosynthesis I
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PWY-5331
taurine biosynthesis II
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PWY-7850
testosterone degradation (anaerobic)
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PWY-8155
toluene degradation II (aerobic) (via 4-methylcatechol)
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TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
toluene degradation to benzoate
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TOLUENE-DEG-CATECHOL-PWY
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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-
PWY-5410
vanillin biosynthesis I
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PWY-5665
xyloglucan degradation II (exoglucanase)
-
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PWY-6807
cyclohexanol degradation
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CYCLOHEXANOL-OXIDATION-PWY
octane oxidation
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P221-PWY
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
-
strain P25 utilizes 4-chlorobiphenyl and 4-chlorobenzoic acid as sole carbon and energy sources
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
-
membrane topology with 6 transmembrane segments and 6 cytoplasmic loops, overview
: 
