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IUBMB CommentsA flavoprotein (FAD). A component of the multienzyme 2-oxo-acid dehydrogenase complexes. In the pyruvate dehydrogenase complex, it binds to the core of EC 2.3.1.12, dihydrolipoyllysine-residue acetyltransferase, and catalyses oxidation of its dihydrolipoyl groups. It plays a similar role in the oxoglutarate and 3-methyl-2-oxobutanoate dehydrogenase complexes. Another substrate is the dihydrolipoyl group in the H-protein of the glycine-cleavage system ({AminoAcid/GlyCleave} for diagram), in which it acts, together with EC 1.4.4.2, glycine dehydrogenase (decarboxylating), and EC 2.1.2.10, aminomethyltransferase, to break down glycine. It can also use free dihydrolipoate, dihydrolipoamide or dihydrolipoyllysine as substrate. This enzyme was first shown to catalyse the oxidation of NADH by methylene blue; this activity was called diaphorase. The glycine cleavage system is composed of four components that only loosely associate: the P protein (EC 1.4.4.2), the T protein (EC 2.1.2.10), the L protein (EC 1.8.1.4) and the lipoyl-bearing H protein .
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coronin-interacting protein
dehydrogenase, lipoamide
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dehydrolipoate dehydrogenase
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dihydrolipoamide dehydrogenase
dihydrolipoamide dehydrogenase E3
dihydrolipoamide:NAD+ oxidoreductase
dihydrolipoic dehydrogenase
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dihydrolipomide dehydrogenase
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dihydrolipoyl dehydrogenase
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E3 component of 2-oxoglutarate dehydrogenase complex
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E3 component of acetoin cleaving system
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E3 component of alpha keto acid dehydrogenase complexes
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E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes
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E3 component of pyruvate complex
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E3 lipoamide dehydrogenase
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E3 protein component of 2-oxoacid dehydrogenase multienzyme complexes
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E3 subunit of the alpha-ketoglutarate dehydrogenase complex
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EC 1.6.4.3
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formerly
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Glycine cleavage system L protein
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Glycine oxidation system L-factor
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lipoamide dehydrogenase (NADH)
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lipoamide dehydrogenase C
lipoamide dehydrogenase2
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lipoamide oxidoreductase (NADH)
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lipoamide reductase
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lipoamide-dehydrogenase-valine
lipoate dehydrogenase
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lipoic acid dehydrogenase
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NAD(P)H:lipoamide oxidoreductase
NADH:lipoamide oxidoreductase
nicotinamide adenine dinucleotide diaphorase
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CIP50

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coronin-interacting protein

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coronin-interacting protein
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DHLipDH

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diaphorase

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dihydrolipoamide dehydrogenase

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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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658466, 659099, 659101, 672869, 674382, 675350, 677161, 691569, 694356, 694854, 741757, 764703, 765097, 765743
dihydrolipoamide dehydrogenase
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674943, 693271, 713452, 741807, 741998, 742087, 742221, 743050, 743051, 743052, 743127, 743767, 765207, 765208, 765209, 765210
dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
Starkeyomyces koorchalomoides
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dihydrolipoamide dehydrogenase
Starkeyomyces koorchalomoides FDUS 0337
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase
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dihydrolipoamide dehydrogenase E3

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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide dehydrogenase E3
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common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate, 2-oxoglutarate, and the branched-chain 2-oxo acids
dihydrolipoamide:NAD+ oxidoreductase

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dihydrolipoamide:NAD+ oxidoreductase
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DLD

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DLD1

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isoform
Dld2

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isoform
DLDH

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DLDH2

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E3

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E3
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658466, 659099, 659101, 672869, 674382, 674759, 675350, 677161, 691569, 741757, 764703
E3
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pyruvate dehydrogenase complex is composed of multiple copies of three catalytic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3)
E3
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674943, 741807, 742221, 743050, 743051, 743052, 743767, 765207, 765208, 765209, 765210
LAD

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LADH

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LADH
Starkeyomyces koorchalomoides
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LADH is an E3 component of pyruvate dehydrogenase complex with significant protein acetyltransferase activity
LADH
Starkeyomyces koorchalomoides FDUS 0337
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LADH is an E3 component of pyruvate dehydrogenase complex with significant protein acetyltransferase activity
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LDH

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LipDH

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lipoamide dehydrogenase

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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase
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lipoamide dehydrogenase C

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lipoamide dehydrogenase C
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lipoamide-dehydrogenase-valine

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lipoamide-dehydrogenase-valine
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is the specific E3 subunit for branched-chain keto acid dehydrogenase
lipoamide-dehydrogenase-valine
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is the specific E3 subunit for branched-chain keto acid dehydrogenase
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lipoyl dehydrogenase

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LPD

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LPD1

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plastidial LPD1 encodes one of the two E3 isoforms found in the plastidial pyruvate dehydrogenase complex
LPD2

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Lpd3

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LpdA

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LpdC

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LpdG

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LpdV

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NAD(P)H:lipoamide oxidoreductase

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NAD(P)H:lipoamide oxidoreductase
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NADH dehydrogenase

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NADH diaphorase

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NADH:lipoamide oxidoreductase

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NADH:lipoamide oxidoreductase
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pdhL

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rhDLDH

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TAase

Starkeyomyces koorchalomoides
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Starkeyomyces koorchalomoides transacetylase (TAase) is a dihydrolipoamide dehydrogenase and also exhibits diaphorase activity
TAase
Starkeyomyces koorchalomoides FDUS 0337
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Starkeyomyces koorchalomoides transacetylase (TAase) is a dihydrolipoamide dehydrogenase and also exhibits diaphorase activity
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additional information

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enzyme is a member of the pyridine nucleotide-disulfide oxidoreductase family of enzymes, enzyme is the E3 component of three different 2-ketoacid dehydrogenase multienzyme complexes, i.e. the pyruvate, 2-ketoglutarate, and branched chain 2-keto acid dehydrogenase complexes
additional information
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enzyme is the E3 component of 2-ketoacid dehydrogenase multienzyme complex
additional information
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cf. EC 1.6.99.3
additional information
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cf. EC 1.6.99.3
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additional information
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the enzyme is the E3 component of the pyruvate dehydrogenase multienzyme complex
additional information
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enzyme belongs to the family of pyridine nucleotide oxidoreductases
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+

ping-pong mechanism
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
ping-pong mechanism
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
ping-pong mechanism
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
ping-pong mechanism
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
ping pong mechanism
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
involvement of a reversibly reducible disulfide bond in catalytic mechanism
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
Asp473 is important for efficient catalytic function of the enzyme
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
formation of a FADH2-NAD+ intermediate in catalysis, reaction mechanism of reductive and oxidative half-reactions involving enzyme, FAD/FADH2, and NAD+/NADH
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
in the two-electron-reduced enzyme, the disulfide is reduced while the FAD cofactor is oxidized, in the four-electron-reduced enzyme, both redox centers are reduced, mechanism of the diaphorase reaction which occurs when the enzyme is in the four-electron-reduced state
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
the mitochondrial isozyme shows ping pong kinetic mechanism
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protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
in the physiological direction, dihydrolipoamide, which is covalently tethered to another enzymatic subunit in the multienzyme complex, binds to the disulfide-exchange site near the si face of the FAD cofactor. Ddihydrolipoamide is thought to donate a hydride to the disulfide and a proton to an active-site base forming a stable charge-transfer complex between the thiolate of the mixed disulfide and the oxidized FAD cofactor. In the presence of NAD+, electrons are passed to FAD and then to NAD+ on the re face of the flavin, forming NADH with the release of a proton, mechanism modelling, detailed overview
protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
in the physiological direction, dihydrolipoamide, which is covalently tethered to another enzymatic subunit in the multienzyme complex, binds to the disulfide-exchange site near the si face of the FAD cofactor. Dihydrolipoamide is thought to donate a hydride to the disulfide and a proton to an active-site base forming a stable charge-transfer complex between the thiolate of the mixed disulfide and the oxidized FAD cofactor. In the presence of NAD+, electrons are passed to FAD and then to NAD+ on the re face of the flavin, forming NADH with the release of a proton, mechanism modelling, detailed overview
protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
in the physiological direction, dihydrolipoamide, which is covalently tethered to another enzymatic subunit in the multienzyme complex, binds to the disulfide-exchange site near the si face of the FAD cofactor. Dihydrolipoamide is thought to donate a hydride to the disulfide and a proton to an active-site base forming a stable charge-transfer complex between the thiolate of the mixed disulfide and the oxidized FAD cofactor. In the presence of NAD+, electrons are passed to FAD and then to NAD+ on the re face of the flavin, forming NADH with the release of a proton, mechanism modelling, detailed overview
protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
kinetic mechanism of human E3 enzyme is a ping-pong mechanism. In human E3, dihydrolipoamide binds to the si-face of FAD, whereas NAD+ binds to the re-face. These two spatially separate substrate binding sites can allow the enzyme to form a ternary complex with two substrates, which is an essential feature of the sequential mechanism
protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
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(R,S)-lipoamide + NADH + H+
dihydrolipoamide + NAD+
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r
1,4-benzoquinone + NADH
1,4-benzoquinol + NAD+
1-methoxyphenazinium methosulfate + NADH
? + NAD+
2 ferricyanide + NADH
2 ferrocyanide + NAD+ + H+
2 ferricytochrome c + NADH
2 ferrocytochrome c + NAD+ + H+
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cytochrome c is a poor electron acceptor, only in presence of methylene blue the enzyme shows some activity
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2,6-dichlorophenolindophenol + NADH + H+
reduced 2,6-dichlorophenolindophenol + NAD+
2,6-dimethoxy-1,4-benzoquinone + NADH
? + NAD+
8.0% activity compared to lipoamide
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2,6-dimethyl-1,4-benzoquinone + NADH
2,6-dimethyl-1,4-benzoquinol + NAD+
2-(p-iodophenyl)-3-p-nitrophenyl-5-phenyltetrazolium chloride + NADH
? + NAD+
2-hydroxy-1,4-benzoquinone + NADH
2-hydroxy-1,4-benzoquinol + NAD+
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?
2-methyl-1,4-benzoquinone + NADH
2-methyl-1,4-benzoquinol + NAD+
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2-phenyl-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide + NADH
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3-nitrotyrosine + dihydrolipoic acid
3-aminotyrosine + lipoic acid + H2O
3-nitrotyrosine + NAD(P)H
3-aminotyrosine + NAD(P)+ + H2O
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3-nitrotyrosine + NADPH
3-aminotyrosine + NADP+ + H2O
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3-nitrotyrosine + ubiquinol
3-aminotyrosine + ubiquinone + H2O
5,5'-dithiobis-(2-nitrobenzoic acid) + NADH + H+
? + NAD+
5-hydroxy-1,4-naphthoquinone + NADH
5-hydroxy-1,4-naphthoquinol + NAD+
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5-nitroblue tetrazolium chloride + NADH
? + NAD+
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5.1% of the activity with lipoamide
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8-nitroguanine + dihydrolipoic acid
8-aminoguanine + lipoic acid + H2O
8-nitroguanine + NAD(P)H
8-aminoguanine + NAD(P)+ + H2O
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8-nitroguanine + NADPH
8-aminoguanine + NADP+ + H2O
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8-nitroguanine + ubiquinol
8-aminoguanine + ubiquinone + H2O
8-nitroxanthine + dihydrolipoic acid
8-aminoxanthine + lipoic acid + H2O
8-nitroxanthine + NAD(P)H
8-aminoxanthine + NAD(P)+ + H2O
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8-nitroxanthine + NADPH
8-aminoxanthine + NADP+ + H2O
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8-nitroxanthine + ubiquinol
8-aminoxanthine + ubiquinone + H2O
alpha-lipoamide + NADH
dihydrolipoamide + NAD+
alpha-lipoamide + NADH + H+
dihydrolipoamide + NAD+
alpha-lipoic acid + NADH + H+
dihydrolipoic acid + NAD+
benzyl viologen + NADH
? + NAD+
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2.9% of the activity with lipoamide
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coenzyme Q-10 + NADPH
ubiquinol + NADP+