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Information on Organism [Clostridium] scindens

Synonyms:
ATCC 35704; CIP 106687; Clostridium scindens Morris et al. 1985; [Clostridium] scindens; Clostridium scindens; DSM 5676; Eubacterium sp. (strain VPI 12708); Eubacterium sp. VPI 12708; Eubacterium sp. VPI-12708; Eubacterium VPI-12708; JCM 6567; strain Bokkenheuser 19;
Word Map for Organism [Clostridium] scindens
TaxTree of Organism [Clostridium] scindens
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Firmicutes can be found in Brenda BRENDA pathways(phylum)
Clostridia can be found in Brenda BRENDA pathways(class)
Eubacteriales can be found in Brenda BRENDA pathways(order)
Lachnospiraceae can be found in Brenda BRENDA pathways(family)
Lachnoclostridium can be found in Brenda BRENDA pathways(genus)
[Clostridium] scindens can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-propane-1,2-diol degradation
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PWY-7013
3-methylbutanol biosynthesis (engineered)
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PWY-6871
ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
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PWY-7832
acetaldehyde biosynthesis I
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PWY-6333
acetylene degradation (anaerobic)
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P161-PWY
alpha-Linolenic acid metabolism
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aminopropanol phosphate biosynthesis II
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PWY-7378
beta-Alanine metabolism
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bile acid 7alpha-dehydroxylation
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PWY-7754
bile acid 7beta-dehydroxylation
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PWY-8134
bile acids 12-O-epimerization
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PWY-8256
bile acids 7-O epimerization
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PWY-8254
biosynthesis of Lewis epitopes (H. pylori)
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PWY-7833
Biosynthesis of secondary metabolites
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Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
Chloroalkane and chloroalkene degradation
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citric acid cycle
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Cysteine and methionine metabolism
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Drug metabolism - cytochrome P450
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estradiol biosynthesis I (via estrone)
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PWY66-380
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol fermentation
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ethanolamine utilization
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PWY0-1477
Fatty acid degradation
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folate transformations I
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PWY-2201
folate transformations II (plants)
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PWY-3841
folate transformations III (E. coli)
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1CMET2-PWY
Glycine, serine and threonine metabolism
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Glycolysis / Gluconeogenesis
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Glycosphingolipid biosynthesis - globo and isoglobo series
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Glycosphingolipid biosynthesis - lacto and neolacto series
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heterolactic fermentation
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P122-PWY
ketolysis
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PWY66-368
L-isoleucine degradation II
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PWY-5078
L-leucine degradation III
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PWY-5076
L-methionine biosynthesis I
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HOMOSER-METSYN-PWY
L-methionine biosynthesis III
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HSERMETANA-PWY
L-methionine degradation III
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PWY-5082
L-methionine salvage from L-homocysteine
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ADENOSYLHOMOCYSCAT-PWY
L-phenylalanine degradation III
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PWY-5079
L-threonine degradation II
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THREONINE-DEG2-PWY
L-threonine degradation III (to methylglyoxal)
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THRDLCTCAT-PWY
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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PWY-5057
lacto-series glycosphingolipids biosynthesis
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PWY-7839
leucine metabolism
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Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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methionine metabolism
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Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
Naphthalene degradation
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noradrenaline and adrenaline degradation
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PWY-6342
One carbon pool by folate
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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phenylalanine metabolism
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phenylethanol biosynthesis
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PWY-5751
phosphopantothenate biosynthesis I
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PANTO-PWY
phytol degradation
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PWY66-389
propanol degradation
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pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
Pyruvate metabolism
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Retinol metabolism
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Riboflavin metabolism
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salidroside biosynthesis
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PWY-6802
Secondary bile acid biosynthesis
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Selenocompound metabolism
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serotonin degradation
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PWY-6313
serotonin metabolism
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Steroid hormone biosynthesis
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superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
TCA cycle VI (Helicobacter)
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REDCITCYC
threonine metabolism
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Tyrosine metabolism
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tyrosine metabolism
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ursodeoxycholate biosynthesis (bacteria)
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PWY-7588
valine metabolism
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Valine, leucine and isoleucine degradation
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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LINKS TO OTHER DATABASES (specific for [Clostridium] scindens)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA