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Information on Organism Streptomyces rimosus

Synonyms:
AS 4.1438; ATCC 10970; ATCC 23955; BCRC 11612; CBS 437.51; CBS 938.68; CCRC 11612; CCRC:11612; CECT 3144; culture-collection:AS:4.1438; culture-collection:NRRL:B:2659; DSM 40260; HAMBI 1066; HUT 6064; HUT 6100; ICMP 919; IFM 1065; IFO 12907; IMET 40364; ISP 5260; JCM 4073; JCM 4667; KCTC 1077; LMG 19352; LMG:19352; LMG 5984; LMG:5984; NBRC 12907; NCIMB 8229; NRRL 2234; NRRL B-2659; NRRL-ISP 5260; RIA 1185; RIA 606; Streptomyces rimosus; Streptomyces rimosus Sobin et al. 1953; Streptomyces rimosus Sobin et al. 1953 emend. Nouioui et al. 2018; VKM Ac-849;
Word Map for Organism Streptomyces rimosus
TaxTree of Organism Streptomyces rimosus
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Actinobacteria can be found in Brenda BRENDA pathways(phylum)
Actinomycetia can be found in Brenda BRENDA pathways(class)
Streptomycetales can be found in Brenda BRENDA pathways(order)
Streptomycetaceae can be found in Brenda BRENDA pathways(family)
Streptomyces can be found in Brenda BRENDA pathways(genus)
Streptomyces rimosus can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(5Z)-dodecenoate biosynthesis I
-
-
PWY0-862
(5Z)-dodecenoate biosynthesis II
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-
PWY-7858
(S)-lactate fermentation to propanoate, acetate and hydrogen
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-
PWY-8086
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,5-anhydrofructose degradation
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PWY-6992
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
2,3-dihydroxybenzoate biosynthesis
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PWY-5901
2-carboxy-1,4-naphthoquinol biosynthesis
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-
PWY-5837
2-nitrotoluene degradation
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-
PWY-5641
2-oxobutanoate degradation II
-
-
2OXOBUTYRATECAT-PWY
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
-
-
PWY-5531
3-dehydroquinate biosynthesis I
-
-
PWY-6164
4-chlorobenzoate degradation
-
-
PWY-6215
4-coumarate degradation (aerobic)
-
-
PWY-8002
4-hydroxymandelate degradation
4-methylphenol degradation to protocatechuate
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-
PWY-7700
6-hydroxymethyl-dihydropterin diphosphate biosynthesis
-
-
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
-
-
PWY-6147
6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium)
-
-
PWY-7852
6-methylpretetramide biosynthesis
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-
PWY-7811
8-amino-7-oxononanoate biosynthesis I
-
-
PWY-6519
Acarbose and validamycin biosynthesis
-
-
acetoin degradation
-
-
acrylonitrile degradation I
-
-
PWY-7308
adenosine ribonucleotides de novo biosynthesis
-
-
PWY-7219
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
aerobic toluene degradation
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-
Aflatoxin biosynthesis
-
-
Alanine, aspartate and glutamate metabolism
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-
aldoxime degradation
-
-
P345-PWY
alpha-Linolenic acid metabolism
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-
Amino sugar and nucleotide sugar metabolism
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-
Aminobenzoate degradation
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-
ammonia assimilation cycle III
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-
AMMASSIM-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anandamide biosynthesis I
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-
PWY-8051
arachidonate biosynthesis
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-
Arachidonic acid metabolism
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-
arachidonic acid metabolism
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-
Arginine and proline metabolism
-
-
Arginine biosynthesis
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-
aromatic polyketides biosynthesis
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-
PWY-6316
avenanthramide biosynthesis
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-
PWY-8157
bacterial bioluminescence
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-
PWY-7723
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
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PWY-6444
Benzoate degradation
-
-
Bifidobacterium shunt
-
-
P124-PWY
Biosynthesis of 12-, 14- and 16-membered macrolides
-
-
Biosynthesis of secondary metabolites
-
-
Biosynthesis of siderophore group nonribosomal peptides
-
-
Biosynthesis of type II polyketide backbone
-
-
Biosynthesis of type II polyketide products
-
-
Biosynthesis of unsaturated fatty acids
-
-
Biosynthesis of vancomycin group antibiotics
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Biotin metabolism
-
-
bisphenol A degradation
-
-
PWY-7757
Butanoate metabolism
-
-
C4 and CAM-carbon fixation
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-
C5-Branched dibasic acid metabolism
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-
caffeine biosynthesis I
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-
PWY-5037
caffeine biosynthesis II (via paraxanthine)
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PWY-5038
Caffeine metabolism
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-
Carbon fixation pathways in prokaryotes
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-
catechol degradation to 2-hydroxypentadienoate I
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-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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-
PWY-5419
chitin biosynthesis
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-
PWY-6981
Chlorocyclohexane and chlorobenzene degradation
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-
cholesterol degradation to androstenedione I (cholesterol oxidase)
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-
PWY-6945
chorismate metabolism
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-
cinnamoyl-CoA biosynthesis
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PWY-6457
CO2 fixation in Crenarchaeota
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cutin biosynthesis
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PWY-321
Cysteine and methionine metabolism
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-
cysteine metabolism
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-
cytosolic NADPH production (yeast)
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PWY-7268
D-Amino acid metabolism
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-
D-sorbitol biosynthesis I
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PWY-5054
degradation of aromatic, nitrogen containing compounds
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-
drosopterin and aurodrosopterin biosynthesis
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-
PWY-7442
Drug metabolism - cytochrome P450
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-
Drug metabolism - other enzymes
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-
dTDP-3-acetamido-3,6-dideoxy-alpha-D-glucose biosynthesis
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-
PWY-7318
dTDP-3-acetamido-alpha-D-fucose biosynthesis
-
-
PWY-6953
dTDP-4-O-demethyl-beta-L-noviose biosynthesis
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-
PWY-7301
dTDP-6-deoxy-alpha-D-allose biosynthesis
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-
PWY-7413
dTDP-alpha-D-forosamine biosynthesis
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-
PWY-6808
dTDP-alpha-D-mycaminose biosynthesis
-
-
PWY-7414
dTDP-alpha-D-olivose, dTDP-alpha-D-oliose and dTDP-alpha-D-mycarose biosynthesis
-
-
PWY-6973
dTDP-alpha-D-ravidosamine and dTDP-4-acetyl-alpha-D-ravidosamine biosynthesis
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-
PWY-7688
dTDP-beta-D-fucofuranose biosynthesis
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PWY-7312
dTDP-beta-L-4-epi-vancosamine biosynthesis
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PWY-7440
dTDP-beta-L-digitoxose biosynthesis
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PWY-7657
dTDP-beta-L-megosamine biosynthesis
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PWY-7104
dTDP-beta-L-mycarose biosynthesis
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-
PWY-6976
dTDP-beta-L-olivose biosynthesis
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-
PWY-6974
dTDP-beta-L-rhamnose biosynthesis
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DTDPRHAMSYN-PWY
dTDP-D-desosamine biosynthesis
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-
PWY-6942
dTDP-L-daunosamine biosynthesis
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-
PWY-7814
dTDP-N-acetylthomosamine biosynthesis
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-
PWY-7315
dTDP-N-acetylviosamine biosynthesis
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PWY-7316
dTDP-sibirosamine biosynthesis
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PWY-8380
dTDPLrhamnose biosynthesis
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enterobactin biosynthesis
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-
Entner-Doudoroff pathway I
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-
PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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-
NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ephedrine biosynthesis
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-
PWY-5883
erythro-tetrahydrobiopterin biosynthesis I
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-
PWY-5663
erythromycin D biosynthesis
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-
PWY-7106
ethanol degradation IV
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-
PWY66-162
Fatty acid biosynthesis
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-
fatty acid biosynthesis initiation (mitochondria)
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PWY66-429
fatty acid biosynthesis initiation (type I)
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PWY-5966-1
Fatty acid elongation
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fatty acid elongation -- saturated
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FASYN-ELONG-PWY
Fe(II) oxidation
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PWY-6692
flavonoid biosynthesis
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PWY1F-FLAVSYN
Flavonoid biosynthesis
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-
flavonoid biosynthesis (in equisetum)
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PWY-6787
flavonoid di-C-glucosylation
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PWY-7897
Fluorobenzoate degradation
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-
Folate biosynthesis
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-
formaldehyde assimilation II (assimilatory RuMP Cycle)
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-
PWY-1861
formaldehyde oxidation I
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-
RUMP-PWY
Fructose and mannose metabolism
-
-
Galactose metabolism
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-
GDP-alpha-D-glucose biosynthesis
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PWY-5661
GDP-mannose biosynthesis
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-
PWY-5659
gluconeogenesis I
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-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glucose and glucose-1-phosphate degradation
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GLUCOSE1PMETAB-PWY
glutamate and glutamine metabolism
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-
glutaminyl-tRNAgln biosynthesis via transamidation
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PWY-5921
Glutathione metabolism
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-
glutathione metabolism
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glycerol degradation to butanol
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PWY-7003
Glycerolipid metabolism
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-
Glycerophospholipid metabolism
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-
Glycine, serine and threonine metabolism
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-
glycogen degradation I
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-
GLYCOCAT-PWY
glycogen degradation II
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-
PWY-5941
glycogen metabolism
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-
glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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-
ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glyoxylate and dicarboxylate metabolism
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-
gondoate biosynthesis (anaerobic)
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PWY-7663
heme b biosynthesis II (oxygen-independent)
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-
HEMESYN2-PWY
heme metabolism
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-
heterolactic fermentation
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-
P122-PWY
homocysteine and cysteine interconversion
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PWY-801
hydrogen sulfide biosynthesis II (mammalian)
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PWY66-426
IAA biosynthesis
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-
indole-3-acetate biosynthesis II
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-
PWY-581
indole-3-acetate biosynthesis IV (bacteria)
-
-
PWY-5025
Inositol phosphate metabolism
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-
isoleucine metabolism
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-
jadomycin biosynthesis
-
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PWY-6679
L-asparagine biosynthesis III (tRNA-dependent)
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PWY490-4
L-citrulline biosynthesis
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-
CITRULBIO-PWY
L-cysteine biosynthesis III (from L-homocysteine)
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-
HOMOCYSDEGR-PWY
L-cysteine biosynthesis VI (reverse transsulfuration)
-
-
PWY-I9
L-glutamate biosynthesis I
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-
GLUTSYN-PWY
L-glutamine degradation I
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-
GLUTAMINDEG-PWY
L-histidine degradation V
-
-
PWY-5031
L-isoleucine biosynthesis I (from threonine)
-
-
ILEUSYN-PWY
L-isoleucine biosynthesis II
-
-
PWY-5101
L-isoleucine biosynthesis III
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-
PWY-5103
L-isoleucine biosynthesis IV
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-
PWY-5104
L-lactaldehyde degradation
-
-
L-valine biosynthesis
-
-
VALSYN-PWY
lactate fermentation
-
-
lipid metabolism
-
-
macrolide antibiotic biosynthesis
-
-
Metabolic pathways
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methane metabolism
-
-
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methyl indole-3-acetate interconversion
-
-
PWY-6303
methylsalicylate degradation
-
-
PWY18C3-24
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
-
FERMENTATION-PWY
mycolate biosynthesis
-
-
PWYG-321
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
naringenin biosynthesis (engineered)
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-
PWY-7397
Neomycin, kanamycin and gentamicin biosynthesis
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-
Nicotinate and nicotinamide metabolism
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-
non-pathway related
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-
O-Antigen nucleotide sugar biosynthesis
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-
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
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PWY-7388
oleandomycin activation/inactivation
-
-
PWY-6972
oleate biosynthesis II (animals and fungi)
-
-
PWY-5996
oleate biosynthesis IV (anaerobic)
-
-
PWY-7664
Oxidative phosphorylation
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-
oxidative phosphorylation
-
-
palmitate biosynthesis
-
-
palmitate biosynthesis II (type II fatty acid synthase)
-
-
PWY-5971
palmitate biosynthesis III
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-
PWY-8279
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
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-
PWY-6282
Pantothenate and CoA biosynthesis
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-
Pentose phosphate pathway
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-
pentose phosphate pathway
-
-
pentose phosphate pathway (oxidative branch) I
-
-
OXIDATIVEPENT-PWY
Peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis II (staphylococci)
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-
PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
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-
PWY-6471
peptidoglycan biosynthesis V (beta-lactam resistance)
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PWY-6470
peptidoglycan maturation (meso-diaminopimelate containing)
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PWY0-1586
phenol degradation
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-
Phenylalanine metabolism
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-
Phenylalanine, tyrosine and tryptophan biosynthesis
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-
Phenylpropanoid biosynthesis
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-
phenylpropanoid biosynthesis
-
-
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
phloridzin biosynthesis
-
-
PWY-6515
phosphatidylcholine acyl editing
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PWY-6803
phospholipases
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-
LIPASYN-PWY
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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-
PWY-7218
phytate degradation I
-
-
PWY-4702
polybrominated dihydroxylated diphenyl ethers biosynthesis
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-
PWY-7934
Polyketide sugar unit biosynthesis
-
-
Porphyrin and chlorophyll metabolism
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-
preQ0 biosynthesis
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-
PWY-6703
Propanoate metabolism
-
-
Purine metabolism
-
-
purine metabolism
-
-
Pyrimidine metabolism
-
-
pyrimidine metabolism
-
-
pyruvate fermentation to (R)-acetoin I
-
-
PWY-5938
pyruvate fermentation to (R)-acetoin II
-
-
PWY-5939
pyruvate fermentation to (S)-acetoin
-
-
PWY-6389
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
Pyruvate metabolism
-
-
reactive oxygen species degradation
-
-
DETOX1-PWY-1
retinol biosynthesis
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-
PWY-6857
Retinol metabolism
-
-
rosmarinic acid biosynthesis I
-
-
PWY-5048
Rubisco shunt
-
-
PWY-5723
salicylate biosynthesis I
-
-
PWY-6406
salicylate biosynthesis II
-
-
PWY-8321
Selenocompound metabolism
-
-
serine metabolism
-
-
spongiadioxin C biosynthesis
-
-
PWY-7935
sporopollenin precursors biosynthesis
-
-
PWY-6733
Starch and sucrose metabolism
-
-
starch biosynthesis
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-
PWY-622
starch degradation
-
-
stearate biosynthesis I (animals)
-
-
PWY-5972
stearate biosynthesis II (bacteria and plants)
-
-
PWY-5989
stearate biosynthesis III (fungi)
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-
PWY3O-355
stearate biosynthesis IV
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-
PWY-8280
Steroid degradation
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-
streptomycin biosynthesis
-
-
PWY-5940
Streptomycin biosynthesis
-
-
streptorubin B biosynthesis
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-
PWY1A0-6120
Styrene degradation
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-
suberin monomers biosynthesis
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sucrose degradation II (sucrose synthase)
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-
PWY-3801
sucrose degradation III (sucrose invertase)
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-
PWY-621
sucrose degradation IV (sucrose phosphorylase)
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PWY-5384
sulfopterin metabolism
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-
superoxide radicals degradation
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DETOX1-PWY
superpathway of fatty acid biosynthesis initiation
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-
FASYN-INITIAL-PWY
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
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GLYCOLYSIS-E-D
superpathway of methylsalicylate metabolism
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PWY18C3-25
tetracycline and oxytetracycline biosynthesis
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-
PWY-7812
Tetracycline biosynthesis
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-
tetradecanoate biosynthesis (mitochondria)
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-
PWY66-430
tetrahydrofolate metabolism
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-
tetrahydromonapterin biosynthesis
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-
PWY0-1433
theobromine biosynthesis I
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-
PWY-5039
Thiamine metabolism
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-
threo-tetrahydrobiopterin biosynthesis
-
-
PWY-6983
toluene degradation II (aerobic) (via 4-methylcatechol)
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TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
trehalose degradation I (low osmolarity)
-
-
TREDEGLOW-PWY
trehalose degradation II (cytosolic)
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-
PWY0-1182
trehalose degradation IV
-
-
PWY-2722
trehalose degradation V
-
-
PWY-2723
triacylglycerol degradation
-
-
LIPAS-PWY
Tryptophan metabolism
-
-
Tyrosine metabolism
-
-
Ubiquinone and other terpenoid-quinone biosynthesis
-
-
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
UMP biosynthesis I
-
-
PWY-5686
UMP biosynthesis II
-
-
PWY-7790
UMP biosynthesis III
-
-
PWY-7791
valine metabolism
-
-
Valine, leucine and isoleucine biosynthesis
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-
Valine, leucine and isoleucine degradation
-
-
Vitamin B6 metabolism
-
-
vitamin K metabolism
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-
xanthohumol biosynthesis
-
-
PWY-5135
Xylene degradation
-
-
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
additional information
-
optimal enzyme production at pH 9.0 and 27°C after 96 h on glucose and malt extract as carbon and nitrogen sources
Manually annotated by BRENDA team
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Streptomyces rimosus)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA