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Organism related
Word Map for Organism Diospyros kaki
- Diospyros kaki
- astringent
- ebenaceae
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non-astringent
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brillante
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deastringency
TaxTree of Organism Diospyros kaki
Condensed Tree View
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EC NUMBER 
COMMENTARY 
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
2'-deoxymugineic acid phytosiderophore biosynthesis
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PWY-5912
2,3-cis-flavanols biosynthesis
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PWY-6035
2,3-trans-flavanols biosynthesis
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PWY-6029
2-arachidonoylglycerol biosynthesis
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PWY-8052
3-methylbutanol biosynthesis (engineered)
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PWY-6871
3-phosphoinositide biosynthesis
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PWY-6352
4-hydroxy-2-nonenal detoxification
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PWY-7112
9-lipoxygenase and 9-allene oxide synthase pathway
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PWY-5407
9-lipoxygenase and 9-hydroperoxide lyase pathway
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PWY-5408
abscisic acid biosynthesis
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PWY-695
acetaldehyde biosynthesis I
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PWY-6333
acetaldehyde biosynthesis II
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PWY-6330
acetylene degradation (anaerobic)
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P161-PWY
alpha-linolenate metabolites biosynthesis
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PWY-8398
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anandamide biosynthesis I
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PWY-8051
anandamide biosynthesis II
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PWY-8053
arachidonate metabolites biosynthesis
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PWY-8397
aromatic polyketides biosynthesis
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PWY-6316
aspirin triggered resolvin D biosynthesis
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PWY66-395
aspirin triggered resolvin E biosynthesis
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PWY66-394
astaxanthin biosynthesis (bacteria, fungi, algae)
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PWY-5288
bacterial bioluminescence
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PWY-7723
Bifidobacterium shunt
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P124-PWY
bryostatin biosynthesis
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PWY-8047
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C20 prostanoid biosynthesis
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PWY66-374
camalexin biosynthesis
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CAMALEXIN-SYN
cellulose degradation II (fungi)
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PWY-6788
chitin degradation I (archaea)
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PWY-6855
chitin degradation II (Vibrio)
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PWY-6902
chitin degradation III (Serratia)
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PWY-7822
creatine phosphate biosynthesis
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PWY-6158
D-mannose degradation I
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MANNCAT-PWY
D-sorbitol degradation II
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SORBDEG-PWY
di-homo-gamma-linolenate metabolites biosynthesis
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PWY-8396
divinyl ether biosynthesis I
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PWY-5406
divinyl ether biosynthesis II
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PWY-5409
docosahexaenoate metabolites biosynthesis
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PWY-8400
echinatin biosynthesis
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PWY-6325
Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol degradation IV
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PWY66-162
ethanolamine utilization
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PWY0-1477
ethene biosynthesis I (plants)
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ETHYL-PWY
ethene biosynthesis III (microbes)
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PWY-6854
fatty acid biosynthesis initiation (mitochondria)
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PWY66-429
fatty acid biosynthesis initiation (plant mitochondria)
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PWY-6799
fatty acid biosynthesis initiation (type I)
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PWY-5966-1
fatty acid biosynthesis initiation (type II)
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PWY-4381
firefly bioluminescence
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PWY-7913
flavonoid biosynthesis
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PWY1F-FLAVSYN
flavonoid biosynthesis (in equisetum)
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PWY-6787
flavonoid di-C-glucosylation
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PWY-7897
flavonol biosynthesis
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PWY-3101
flexixanthin biosynthesis
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PWY-7947
gibberellin inactivation I (2beta-hydroxylation)
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PWY-102
gliotoxin biosynthesis
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PWY-7533
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glutathione-peroxide redox reactions
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PWY-4081
glycerol degradation to butanol
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PWY-7003
glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
gossypol biosynthesis
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PWY-5773
heme degradation I
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PWY-5874
heterolactic fermentation
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P122-PWY
icosapentaenoate metabolites biosynthesis
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PWY-8399
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
isoflavonoid biosynthesis I
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PWY-2002
isoprene biosynthesis II (engineered)
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PWY-7391
jadomycin biosynthesis
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PWY-6679
jasmonic acid biosynthesis
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PWY-735
justicidin B biosynthesis
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PWY-6824
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-dopa and L-dopachrome biosynthesis
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PWY-6481
L-histidine degradation V
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PWY-5031
L-isoleucine degradation II
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PWY-5078
L-leucine degradation III
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PWY-5076
L-methionine degradation III
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PWY-5082
L-methionine salvage cycle II (plants)
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PWY-7270
L-nicotianamine biosynthesis
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PWY-5957
L-phenylalanine degradation III
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PWY-5079
L-sorbose degradation
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P302-PWY
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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PWY-5057
lanosterol biosynthesis
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PWY-6132
linoleate metabolites biosynthesis
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PWY-8395
lipid A-core biosynthesis (E. coli K-12)
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LIPA-CORESYN-PWY
long chain fatty acid ester synthesis (engineered)
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PWY-6873
maresin biosynthesis
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PWY-8356
matairesinol biosynthesis
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PWY-5466
methanol oxidation to formaldehyde IV
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PWY-5506
mevalonate pathway I (eukaryotes and bacteria)
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PWY-922
mevalonate pathway II (haloarchaea)
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PWY-6174
mevalonate pathway III (Thermoplasma)
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PWY-7524
mevalonate pathway IV (archaea)
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PWY-8125
mitochondrial L-carnitine shuttle
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PWY-6111
mixed acid fermentation
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FERMENTATION-PWY
mRNA capping I
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PWY-7375
mupirocin biosynthesis
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PWY-8012
mycobactin biosynthesis
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PWY185E-1
naringenin biosynthesis (engineered)
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PWY-7397
nitric oxide biosynthesis II (mammals)
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PWY-4983
noradrenaline and adrenaline degradation
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PWY-6342
o-diquinones biosynthesis
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PWY-6752
oleate biosynthesis II (animals and fungi)
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PWY-5996
palmitoleate biosynthesis IV (fungi and animals)
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PWY3O-1801
pectin degradation I
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PWY-7246
pectin degradation II
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PWY-7248
pederin biosynthesis
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PWY-8049
pentachlorophenol degradation
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PCPDEG-PWY
peptido-conjugates in tissue regeneration biosynthesis
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PWY-8355
phenylethanol biosynthesis
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PWY-5751
pheomelanin biosynthesis
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PWY-7917
phloridzin biosynthesis
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PWY-6515
phosphatidylcholine acyl editing
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PWY-6803
phospholipases
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LIPASYN-PWY
phospholipid remodeling (phosphatidate, yeast)
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PWY-7417
phospholipid remodeling (phosphatidylcholine, yeast)
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PWY-7416
phospholipid remodeling (phosphatidylethanolamine, yeast)
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PWY-7409
photosynthesis light reactions
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PWY-101
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
phytol degradation
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PWY66-389
pinobanksin biosynthesis
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PWY-5059
plasmalogen biosynthesis I (aerobic)
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PWY-7782
plasmalogen degradation
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PWY-7783
proanthocyanidins biosynthesis from flavanols
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PWY-641
protectin biosynthesis
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PWY-8357
protective electron sinks in the thylakoid membrane (PSII to PTOX)
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PWY1YI0-7
pyruvate fermentation to (R)-lactate
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PWY-8274
pyruvate fermentation to (S)-lactate
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PWY-5481
pyruvate fermentation to acetate VIII
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PWY-5768
pyruvate fermentation to acetoin III
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PWY3O-440
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
reactive oxygen species degradation
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DETOX1-PWY-1
resolvin D biosynthesis
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PWY66-397
retinol biosynthesis
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PWY-6857
Rubisco shunt
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PWY-5723
salidroside biosynthesis
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PWY-6802
serotonin degradation
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PWY-6313
sesamin biosynthesis
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PWY-5469
sorgoleone biosynthesis
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PWY-5987
sterol:steryl ester interconversion (yeast)
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PWY-7424
superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
triacylglycerol degradation
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LIPAS-PWY
urea degradation II
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PWY-5704
vancomycin resistance I
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PWY-6454
vernolate biosynthesis III
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PWY-6917
xanthohumol biosynthesis
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PWY-5135
xyloglucan degradation II (exoglucanase)
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PWY-6807
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
cv. Fuping Jianshi, cv. Ganmaokui
UniProt
cv. Fupingjianshi, i.e. Diospyros chinensis
UniProt
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
additional information
accumulation of isoform GAL1 is relatively low during fruit growth but significantly increases throughout fruit ripening
expression analysis of isozymes DkXTH1-5 during Fuping Jianshi fruit development, expression patterns, overview
isoform Gal3 displays very low levels of expression in both growing fruit and postharvest fruit
isoform Gal4 displays very low levels of expression in both growing fruit and postharvest fruit
isoform mRNA levels are the highest at the early phase of fruit growth and decrease towards fruit maturity
isozyme DkXTH2 reaches maximum expression concomitance with pronounced fruit softening
isozyme DkXTH3 reaches maximum expression concomitance with pronounced fruit softening
isozyme expression level during softening for 18-24 d using quantitative real-time PCR analysis. Isozymes DKXTH1 and DKXTH2 in untreated fruit have different expression patterns during fruit softening, in which maximum expression occurs on days 3 and 12 of ripening, respectively. 1-Methylcyclopropene (1-MCP) and gibberellic acid (GA3) treatments delay the softening and ethylene peak of persimmon fruit, as well as suppress the expression of both XTH genes, especially gene DKXTH1
isozyme expression level during softening for 18-24 d using quantitative realtime PCR analysis. Isozymes DKXTH1 and DKXTH2 in untreated fruit have different expression patterns during fruit softening, in which maximum expression occurs on days 3 and 12 of ripening, respectively. 1-Methylcyclopropene (1-MCP) and gibberellic acid (GA3) treatments delay the softening and ethylene peak of persimmon fruit, as well as suppress the expression of both XTH genes, especially gene DKXTH1
low expression level in young fruits, very low expression level in ripe fruits
lower expression level in young fruits, moderate to high expression level in ripe fruits
relationship of development of tannin cells and transcript level of the DkLAR gene, analysis of different cultivars, overview
the expression level of peel tissue is higher than that of flesh and pedicel tissues in fruit
the expression of isozyme DkXTH1 is very high in immature growing fruit and peaks before the mature stage
the expression of isozyme DkXTH4 is very high in immature growing fruit and peaks before the mature stage
the expression of isozyme DkXTH5 is very high in immature growing fruit and peaks before the mature stage
wild-type fruit accumulates proanthocyanidin (condensed tannins) during development
high expression level in young leaves, very high in older leaves
predominantly expressed in the leaf and stem
very high expression level in young leaves, low in older leaves
predominantly expressed in the leaf and stem
additional information
isozymes DkXTH1, DkXTH4, and DkXTH5 peak in immature expanding fruit, and their higher expression is observed along with higher fruit firmness in cold-treated fruit or firmer cultivar fruit during storage, while isozymes DkXTH2 and DkXTH3, which reach maxima concomitance with pronounced fruit softening, quantitative real-time PCR expression analysis, overview
additional information
transcriptional profiling reveals that DkXTH8 peaks during dramatic fruit softening. Very lo expression levels in flowers, calyces, leaves and stems, respectively
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
additional information
the enzyme contains a signal peptide
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the coding protein of DkXTH1 is targeted to the cell wall by its N-terminal signal peptide
the coding protein of DkXTH2 is targeted to the cell wall by its N-terminal signal peptide
transient expression assays in onion epidermal cells indicate direct localization of DkXTH8 to the cell wall via its signal peptide
LINKS TO OTHER DATABASES (specific for Diospyros kaki)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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