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Information on Organism Mycobacteroides abscessus

Synonyms:
ATCC 19977; CCUG 20993; CIP 104536; DSM 44196; JCM 13569; "Mycobacterium abcessus" Moore and Frerichs 1953; Mycobacterium abscessus (Adekambi et al., 2006) Tortoli et al. 2016 emend. Nouioui et al. 2018; Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992 emend. Leao et al. 2011; Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992 emend. Tortoli et al. 2016; Mycobacterium abscessus subsp. bolletii (Adekambi et al., 2006) Leao et al. 2011 emend. Tortoli et al. 2016 emend. Nouioui et al. 2018; Mycobacterium abscessus; Mycobacterium chelonae subsp. abscessus (Moore and Frerichs 1953) Kubica et al 1972 (Approved Lists 1980); Mycobacterium chelonae subsp. abscessus; "Mycobacterium chelonei" (sic) Bergey et al. 1923; Mycobacterium chelonei subsp. abscessus; Mycobacteroides abscessus (Moore and Frerichs 1953) Gupta et al. 2018; Mycobacteroides abscessus; NCTC 13031; strain Hauduroy L948; TMC 1543; Mycobacterium abscessus subsp. massiliense (Adekambi et al., 2006) Tortoli et al. 2016 emend. Nouioui et al. 2018; Mycobacterium chelonae subsp. abscessus corrig. (Moore and Frerichs 1953) Kubica et al 1972 (Approved Lists 1980); "Mycobacteroides abscessus" (Moore and Frerichs 1953) Gupta et al. 2018;
Word Map for Organism Mycobacteroides abscessus
TaxTree of Organism Mycobacteroides abscessus
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Actinobacteria can be found in Brenda BRENDA pathways(phylum)
Actinomycetia can be found in Brenda BRENDA pathways(class)
Corynebacteriales can be found in Brenda BRENDA pathways(order)
Mycobacteriaceae can be found in Brenda BRENDA pathways(family)
Mycobacteroides can be found in Brenda (genus)
Mycobacteroides abscessus can be found in Brenda BRENDA pathways(species)
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EC NUMBER
COMMENTARY hide
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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-
PWY-8086
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis
-
-
PWY-6660
7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
-
-
PWY-7286
acetaldehyde biosynthesis II
-
-
PWY-6330
acetoin degradation
-
-
acyl carrier protein activation
-
-
PWY-6012-1
acyl carrier protein metabolism
-
-
PWY-6012
adenine and adenosine salvage III
-
-
PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
aerobic respiration I (cytochrome c)
-
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
alpha-tomatine degradation
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PWY18C3-5
Amino sugar and nucleotide sugar metabolism
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Aminoacyl-tRNA biosynthesis
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-
Arabinogalactan biosynthesis - Mycobacterium
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-
Arginine and proline metabolism
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-
Arginine biosynthesis
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-
arginine metabolism
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-
arsenite to oxygen electron transfer
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-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Ascorbate and aldarate metabolism
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-
ascorbate recycling (cytosolic)
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-
PWY-6370
ATP biosynthesis
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PWY-7980
avenanthramide biosynthesis
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PWY-8157
bacterial bioluminescence
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PWY-7723
beta-(1,4)-mannan degradation
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-
PWY-7456
beta-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation
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-
PWY-7586
beta-Alanine metabolism
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-
beta-D-glucuronide and D-glucuronate degradation
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PWY-7247
Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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Biosynthesis of unsaturated fatty acids
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Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C5-Branched dibasic acid metabolism
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Caffeine metabolism
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Caprolactam degradation
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capsaicin biosynthesis
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PWY-5710
Carbon fixation pathways in prokaryotes
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cellulose degradation
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cellulose degradation II (fungi)
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-
PWY-6788
chlorogenic acid biosynthesis I
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PWY-6039
chlorophyll a degradation I
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PWY-5098
chlorophyll a degradation II
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PWY-6927
chlorophyll a degradation III
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PWY-7164
chlorophyll metabolism
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Citrate cycle (TCA cycle)
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citric acid cycle
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coumarin biosynthesis (via 2-coumarate)
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PWY-5176
coumarins biosynthesis (engineered)
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PWY-7398
curcuminoid biosynthesis
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PWY-6432
cutin biosynthesis
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PWY-321
Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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-
D-galactose degradation I (Leloir pathway)
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PWY-6317
D-galactose detoxification
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PWY-3821
d-mannose degradation
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degradation of hexoses
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-
degradation of sugar acids
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-
diethylphosphate degradation
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PWY-5491
Drug metabolism - other enzymes
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-
dTMP de novo biosynthesis (mitochondrial)
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PWY66-385
enterobactin biosynthesis
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ENTBACSYN-PWY
ethanol degradation IV
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PWY66-162
ethanol fermentation
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ethene biosynthesis III (microbes)
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PWY-6854
Ether lipid metabolism
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Fatty acid degradation
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Fatty acid elongation
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Fe(II) oxidation
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PWY-6692
firefly bioluminescence
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PWY-7913
Flavone and flavonol biosynthesis
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Flavonoid biosynthesis
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Folate biosynthesis
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folate transformations II (plants)
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PWY-3841
folate transformations III (E. coli)
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1CMET2-PWY
formaldehyde oxidation
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formaldehyde oxidation II (glutathione-dependent)
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PWY-1801
formate to nitrite electron transfer
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PWY0-1585
Fructose and mannose metabolism
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-
Galactose metabolism
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-
GDP-mannose biosynthesis
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PWY-5659
ginsenoside metabolism
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-
glucosylglycerate biosynthesis I
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PWY-5662
Glycerolipid metabolism
-
-
Glycerophospholipid metabolism
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glycolate and glyoxylate degradation
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-
Glycolysis / Gluconeogenesis
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-
Glycosaminoglycan degradation
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-
Glycosphingolipid biosynthesis - ganglio series
-
-
Glyoxylate and dicarboxylate metabolism
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-
heme degradation I
-
-
PWY-5874
heme metabolism
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-
heterolactic fermentation
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-
P122-PWY
inosine-5'-phosphate biosynthesis I
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-
PWY-6123
inosine-5'-phosphate biosynthesis II
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PWY-6124
inosine-5'-phosphate biosynthesis III
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PWY-7234
Inositol phosphate metabolism
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-
isoleucine metabolism
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-
L-arginine biosynthesis I (via L-ornithine)
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ARGSYN-PWY
L-arginine biosynthesis II (acetyl cycle)
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ARGSYNBSUB-PWY
L-arginine biosynthesis IV (archaea)
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PWY-7400
L-arginine degradation II (AST pathway)
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AST-PWY
L-arginine degradation XIII (reductive Stickland reaction)
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PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
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PWY-6344
L-citrulline biosynthesis
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CITRULBIO-PWY
L-citrulline degradation
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-
CITRULLINE-DEG-PWY
L-histidine degradation V
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PWY-5031
L-homocysteine biosynthesis
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-
PWY-5344
L-isoleucine biosynthesis I (from threonine)
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ILEUSYN-PWY
L-isoleucine biosynthesis II
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PWY-5101
L-isoleucine biosynthesis III
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PWY-5103
L-isoleucine biosynthesis IV
-
-
PWY-5104
L-lactaldehyde degradation
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-
L-methionine degradation III
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-
PWY-5082
L-valine biosynthesis
-
-
VALSYN-PWY
lactate fermentation
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-
leucine metabolism
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-
linamarin degradation
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-
PWY-3121
linustatin bioactivation
-
-
PWY-7091
lipid A biosynthesis
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-
lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing)
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-
PWY2B4Q-4
lipid IVA biosynthesis (E. coli)
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NAGLIPASYN-PWY
lipid IVA biosynthesis (generic)
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-
PWY-8283
lipid IVA biosynthesis (H. pylori)
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PWYI-14
lipid IVA biosynthesis (P. gingivalis)
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PWY-8245
lipid IVA biosynthesis (P. putida)
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PWY-8073
lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor)
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PWY2G6Z-2
lipid metabolism
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-
Lipoarabinomannan (LAM) biosynthesis
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Lipopolysaccharide biosynthesis
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-
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
lotaustralin degradation
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-
PWY-6002
luteolin triglucuronide degradation
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PWY-7445
Lysine degradation
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-
lysine metabolism
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-
mannosylglucosylglycerate biosynthesis I
-
-
PWY-6686
Metabolic pathways
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-
metabolism of disaccharids
-
-
Methane metabolism
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-
methane metabolism
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-
methanol oxidation to formaldehyde IV
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-
PWY-5506
methionine metabolism
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-
methyl indole-3-acetate interconversion
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-
PWY-6303
methylaspartate cycle
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-
methylsalicylate degradation
-
-
PWY18C3-24
methylwyosine biosynthesis
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-
PWY-7285
Microbial metabolism in diverse environments
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-
mycolate biosynthesis
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-
PWYG-321
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
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PWY-6397
NAD metabolism
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-
NAD salvage pathway V (PNC V cycle)
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-
PWY3O-4107
NADPH to cytochrome c oxidase via plastocyanin
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-
PWY-8271
neolinustatin bioactivation
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-
PWY-7092
Nicotinate and nicotinamide metabolism
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-
nitrate reduction II (assimilatory)
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-
PWY-381
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
Nitrogen metabolism
-
-
Nitrotoluene degradation
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-
non-pathway related
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-
O-Antigen nucleotide sugar biosynthesis
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-
octane oxidation
oleate biosynthesis II (animals and fungi)
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-
PWY-5996
One carbon pool by folate
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-
Other glycan degradation
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-
Other types of O-glycan biosynthesis
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-
Oxidative phosphorylation
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-
oxidative phosphorylation
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-
Pantothenate and CoA biosynthesis
-
-
pantothenate biosynthesis
-
-
Penicillin and cephalosporin biosynthesis
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-
Pentose and glucuronate interconversions
-
-
Peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis II (staphylococci)
-
-
PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
PWY-6471
peptidoglycan maturation (meso-diaminopimelate containing)
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-
PWY0-1586
peptidoglycan recycling I
-
-
PWY0-1261
peptidoglycan recycling II
-
-
PWY-7883
petrobactin biosynthesis
-
-
PWY-6289
Phenazine biosynthesis
-
-
Phenylalanine metabolism
-
-
phenylpropanoid biosynthesis
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-
PWY-361
Phenylpropanoid biosynthesis
-
-
phenylpropanoid biosynthesis
-
-
phenylpropanoids methylation (ice plant)
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-
PWY-7498
phospholipases
-
-
LIPASYN-PWY
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
Photosynthesis
-
-
plasmalogen biosynthesis I (aerobic)
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-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
Porphyrin and chlorophyll metabolism
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-
Propanoate metabolism
-
-
protein S-nitrosylation and denitrosylation
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-
PWY-7798
purine deoxyribonucleosides degradation I
-
-
PWY-7179
purine deoxyribonucleosides degradation II
-
-
PWY-7179-1
Purine metabolism
-
-
purine metabolism
-
-
purine ribonucleosides degradation
-
-
PWY0-1296
pyruvate fermentation to (R)-acetoin I
-
-
PWY-5938
pyruvate fermentation to (R)-acetoin II
-
-
PWY-5939
pyruvate fermentation to (S)-acetoin
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-
PWY-6389
pyruvate fermentation to (S)-lactate
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-
PWY-5481
pyruvate fermentation to acetate VIII
-
-
PWY-5768
pyruvate fermentation to acetoin III
-
-
PWY3O-440
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
Pyruvate metabolism
-
-
reactive oxygen species degradation
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-
DETOX1-PWY-1
retinol biosynthesis
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-
PWY-6857
scopoletin biosynthesis
-
-
PWY-6792
Selenocompound metabolism
-
-
Sphingolipid metabolism
-
-
sporopollenin precursors biosynthesis
-
-
PWY-6733
stachyose degradation
-
-
PWY-6527
Starch and sucrose metabolism
-
-
stearate biosynthesis I (animals)
-
-
PWY-5972
stearate biosynthesis III (fungi)
-
-
PWY3O-355
Steroid hormone biosynthesis
-
-
Stilbenoid, diarylheptanoid and gingerol biosynthesis
-
-
streptomycin biosynthesis
-
-
PWY-5940
Streptomycin biosynthesis
-
-
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
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-
PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sulfopterin metabolism
-
-
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
tetrahydrofolate biosynthesis I
-
-
PWY-6614
tetrahydrofolate metabolism
-
-
Thiamine metabolism
-
-
thioredoxin pathway
-
-
THIOREDOX-PWY
threonine metabolism
-
-
triacylglycerol degradation
-
-
LIPAS-PWY
tRNA charging
-
-
TRNA-CHARGING-PWY
tRNA methylation (yeast)
-
-
PWY-6829
tRNA processing
-
-
PWY0-1479
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
urea cycle
valine metabolism
-
-
Valine, leucine and isoleucine biosynthesis
-
-
vancomycin resistance I
-
-
PWY-6454
vancomycin resistance II
-
-
PWY-6455
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Mycobacteroides abscessus)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA