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Organism related
Word Map for Organism Pseudomonas syringae pv. tomato
- Pseudomonas syringae pv. tomato
- coronatine
-
speck
-
avrpto
- arabidopsidis
- vesicatoria
-
pattern-triggered
- maculicola
-
hyaloperonospora
-
pathovars
-
pathogen-induced
-
pathogen-associated
-
avrrpm1
-
pamp-triggered
-
sa-dependent
- glycinea
-
avrrpt2
-
effector-triggered
-
pstdc3000
-
gene-for-gene
-
sa-mediated
-
hemibiotrophic
TaxTree of Organism Pseudomonas syringae pv. tomato
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EC NUMBER 
COMMENTARY 
-
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(5R)-carbapenem carboxylate biosynthesis
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,5-anhydrofructose degradation
-
-
PWY-6992
1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)
-
-
PWY-6362
2,3-dihydroxybenzoate biosynthesis
-
-
PWY-5901
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-carboxy-1,4-naphthoquinol biosynthesis
-
-
PWY-5837
3-hydroxypropanoate cycle
-
-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-methyl-branched fatty acid alpha-oxidation
-
-
PWY66-387
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
9-lipoxygenase and 9-allene oxide synthase pathway
-
-
PWY-5407
9-lipoxygenase and 9-hydroperoxide lyase pathway
-
-
PWY-5408
abscisic acid biosynthesis
-
-
PWY-695
acetaldehyde biosynthesis I
-
-
PWY-6333
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
acetylene degradation (anaerobic)
-
-
P161-PWY
acrylonitrile degradation I
-
-
PWY-7308
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage III
-
-
PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
alginate biosynthesis I (algal)
-
-
PWY-6073
alginate biosynthesis II (bacterial)
-
-
PWY-6082
alkane oxidation
-
-
PWY-2724
alliin metabolism
-
-
PWY-5706
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
ammonia oxidation II (anaerobic)
-
-
P303-PWY
anandamide biosynthesis I
-
-
PWY-8051
anandamide biosynthesis II
-
-
PWY-8053
anandamide degradation
-
-
PWY6666-1
arachidonate metabolites biosynthesis
-
-
PWY-8397
aromatic glucosinolate activation
-
-
PWY-6684
aromatic biogenic amine degradation (bacteria)
-
-
PWY-7431
aromatic polyketides biosynthesis
-
-
PWY-6316
arsenic detoxification (mammals)
-
-
PWY-4202
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
ascorbate glutathione cycle
-
-
PWY-2261
ascorbate recycling (cytosolic)
-
-
PWY-6370
aspirin triggered resolvin D biosynthesis
-
-
PWY66-395
aspirin triggered resolvin E biosynthesis
-
-
PWY66-394
ATP biosynthesis
-
-
PWY-7980
avenanthramide biosynthesis
-
-
PWY-8157
baicalein degradation (hydrogen peroxide detoxification)
-
-
PWY-7214
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
-
-
PWY-6444
betanidin degradation
-
-
PWY-5461
Bifidobacterium shunt
-
-
P124-PWY
brassinolide biosynthesis I
-
-
PWY-699
brassinolide biosynthesis II
-
-
PWY-2582
bupropion degradation
-
-
PWY66-241
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
-
-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
camalexin biosynthesis
-
-
CAMALEXIN-SYN
canavanine degradation
-
-
PWY-31
capsiconiate biosynthesis
-
-
PWY-6027
ceramide and sphingolipid recycling and degradation (yeast)
-
-
PWY-7119
ceramide degradation by alpha-oxidation
-
-
PWY66-388
chitin degradation I (archaea)
-
-
PWY-6855
chitin degradation II (Vibrio)
-
-
PWY-6902
chitin degradation III (Serratia)
-
-
PWY-7822
chlorosalicylate degradation
-
-
PWY-6107
choline biosynthesis III
-
-
PWY-3561
cinnamoyl-CoA biosynthesis
-
-
PWY-6457
CO2 fixation into oxaloacetate (anaplerotic)
-
-
PWYQT-4429
cyanate degradation
cyclic electron flow
-
-
PWY-8270
cytokinin-O-glucosides biosynthesis
-
-
PWY-2902
D-galacturonate degradation II
-
-
PWY-6486
D-galacturonate degradation III
-
-
PWY-8391
D-glucuronate degradation II
-
-
PWY-6501
D-glucuronate degradation III
-
-
PWY-8390
D-myo-inositol (1,3,4)-trisphosphate biosynthesis
-
-
PWY-6364
D-myo-inositol (1,4,5)-trisphosphate biosynthesis
-
-
PWY-6351
D-myo-inositol (1,4,5)-trisphosphate degradation
-
-
PWY-6363
D-myo-inositol-5-phosphate metabolism
-
-
PWY-6367
D-serine degradation
-
-
PWY0-1535
degradation of aromatic, nitrogen containing compounds
-
-
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
divinyl ether biosynthesis I
-
-
PWY-5406
divinyl ether biosynthesis II
-
-
PWY-5409
docosahexaenoate metabolites biosynthesis
-
-
PWY-8400
dopamine degradation
-
-
PWY6666-2
Entner-Doudoroff pathway I
-
-
PWY-8004
ephedrine biosynthesis
-
-
PWY-5883
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation III
-
-
PWY66-161
ethanol degradation IV
-
-
PWY66-162
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis I (plants)
-
-
ETHYL-PWY
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis V (engineered)
-
-
PWY-7124
fatty acid alpha-oxidation I (plants)
-
-
PWY-2501
Fe(II) oxidation
-
-
PWY-6692
felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis
-
-
PWY-8001
firefly bioluminescence
-
-
PWY-7913
flavonoid biosynthesis
-
-
PWY1F-FLAVSYN
flavonoid biosynthesis (in equisetum)
-
-
PWY-6787
flavonoid di-C-glucosylation
-
-
PWY-7897
fluoroacetate and fluorothreonine biosynthesis
-
-
PWY-6644
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
fructan biosynthesis
-
-
PWY-822
gliotoxin biosynthesis
-
-
PWY-7533
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucosinolate activation
-
-
PWY-5267
glutaminyl-tRNAgln biosynthesis via transamidation
-
-
PWY-5921
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glycerol degradation to butanol
-
-
PWY-7003
glycine betaine degradation I
-
-
PWY-3661
glycine betaine degradation III
-
-
PWY-8325
glycine biosynthesis II
-
-
GLYCINE-SYN2-PWY
glycine cleavage
-
-
GLYCLEAV-PWY
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
PWY-7900
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
glyoxylate assimilation
-
-
PWY-5744
gossypol biosynthesis
-
-
PWY-5773
guanine and guanosine salvage I
-
-
PWY-6620
guanosine nucleotides degradation III
-
-
PWY-6608
heme degradation I
-
-
PWY-5874
heme degradation III
-
-
PWY-7844
heterolactic fermentation
-
-
P122-PWY
histamine degradation
-
-
PWY-6181
hydroxycinnamic acid tyramine amides biosynthesis
-
-
PWY-5474
hypoglycin biosynthesis
-
-
PWY-5826
hypotaurine degradation
-
-
PWY-7387
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
indole glucosinolate activation (herbivore attack)
-
-
PWYQT-4476
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis III (bacteria)
-
-
PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
-
-
PWY-5025
indole-3-acetate biosynthesis V (bacteria and fungi)
-
-
PWY-5026
inosine 5'-phosphate degradation
-
-
PWY-5695
jasmonic acid biosynthesis
-
-
PWY-735
jasmonoyl-L-isoleucine inactivation
-
-
PWY-7859
justicidin B biosynthesis
-
-
PWY-6824
L-arginine degradation I (arginase pathway)
-
-
ARGASEDEG-PWY
L-arginine degradation III (arginine decarboxylase/agmatinase pathway)
-
-
PWY0-823
L-arginine degradation V (arginine deiminase pathway)
-
-
ARGDEGRAD-PWY
L-arginine degradation VI (arginase 2 pathway)
-
-
ARG-PRO-PWY
L-arginine degradation VII (arginase 3 pathway)
-
-
ARG-GLU-PWY
L-arginine degradation X (arginine monooxygenase pathway)
-
-
ARGDEG-V-PWY
L-arginine degradation XIII (reductive Stickland reaction)
-
-
PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
-
-
PWY-6344
L-ascorbate degradation II (bacterial, aerobic)
-
-
PWY-6961
L-ascorbate degradation III
-
-
PWY-6960
L-asparagine biosynthesis III (tRNA-dependent)
-
-
PWY490-4
L-citrulline biosynthesis
-
-
CITRULBIO-PWY
L-cysteine biosynthesis II (tRNA-dependent)
-
-
PWY-6308
L-cysteine degradation II
-
-
LCYSDEG-PWY
L-dopa and L-dopachrome biosynthesis
-
-
PWY-6481
L-glutamate biosynthesis I
-
-
GLUTSYN-PWY
L-glutamine degradation I
-
-
GLUTAMINDEG-PWY
L-isoleucine biosynthesis I (from threonine)
-
-
ILEUSYN-PWY
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-methionine biosynthesis II
-
-
PWY-702
L-methionine degradation I (to L-homocysteine)
-
-
METHIONINE-DEG1-PWY
L-methionine degradation II
-
-
PWY-701
L-methionine degradation III
-
-
PWY-5082
L-Ndelta-acetylornithine biosynthesis
-
-
PWY-6922
L-ornithine biosynthesis II
-
-
ARGININE-SYN4-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-proline biosynthesis I (from L-glutamate)
-
-
PROSYN-PWY
L-proline degradation I
-
-
PROUT-PWY
L-serine degradation
-
-
SERDEG-PWY
L-threonine degradation I
-
-
PWY-5437
L-tryptophan degradation II (via pyruvate)
-
-
TRYPDEG-PWY
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
PWY-6307
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
-
-
PWY-5057
lacinilene C biosynthesis
-
-
PWY-5828
limonene degradation IV (anaerobic)
-
-
PWY-8029
linoleate metabolites biosynthesis
-
-
PWY-8395
luteolin triglucuronide degradation
-
-
PWY-7445
maresin biosynthesis
-
-
PWY-8356
matairesinol biosynthesis
-
-
PWY-5466
melatonin degradation I
-
-
PWY-6398
Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
PWY-6146
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methiin metabolism
-
-
PWY-7614
methylglyoxal degradation I
-
-
PWY-5386
methylglyoxal degradation VIII
-
-
PWY-5386-1
methylsalicylate degradation
-
-
PWY-6184
mitochondrial NADPH production (yeast)
-
-
PWY-7269
mixed acid fermentation
-
-
FERMENTATION-PWY
mycolate biosynthesis
-
-
PWYG-321
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
-
-
PWY-5653
NAD de novo biosynthesis I
-
-
PYRIDNUCSYN-PWY
NAD de novo biosynthesis III
-
-
PWY-8352
NAD de novo biosynthesis IV (anaerobic)
-
-
PWY-8277
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
naringenin biosynthesis (engineered)
-
-
PWY-7397
nicotine biosynthesis
-
-
PWY-5316
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitrogen remobilization from senescing leaves
-
-
PWY-6549
nocardicin A biosynthesis
-
-
PWY-7797
noradrenaline and adrenaline degradation
-
-
PWY-6342
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
o-diquinones biosynthesis
-
-
PWY-6752
octane oxidation
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
pectin degradation I
-
-
PWY-7246
pectin degradation II
-
-
PWY-7248
pentachlorophenol degradation
-
-
PCPDEG-PWY
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
peptido-conjugates in tissue regeneration biosynthesis
-
-
PWY-8355
phenolic malonylglucosides biosynthesis
-
-
PWY-6930
phenylethanol biosynthesis
-
-
PWY-5751
phenylpropanoid biosynthesis
-
-
PWY-361
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
pheomelanin biosynthesis
-
-
PWY-7917
phloridzin biosynthesis
-
-
PWY-6515
phosphatidate metabolism, as a signaling molecule
-
-
PWY-7039
phosphatidylcholine acyl editing
-
-
PWY-6803
phospholipases
-
-
LIPASYN-PWY
phospholipid remodeling (phosphatidate, yeast)
-
-
PWY-7417
phospholipid remodeling (phosphatidylcholine, yeast)
-
-
PWY-7416
phospholipid remodeling (phosphatidylethanolamine, yeast)
-
-
PWY-7409
photosynthesis light reactions
-
-
PWY-101
phytate degradation I
-
-
PWY-4702
phytol degradation
-
-
PWY66-389
plasmalogen degradation
-
-
PWY-7783
proline to cytochrome bo oxidase electron transfer
-
-
PWY0-1544
propanethial S-oxide biosynthesis
-
-
PWY-5707
protectin biosynthesis
-
-
PWY-8357
protective electron sinks in the thylakoid membrane (PSII to PTOX)
-
-
PWY1YI0-7
protein ubiquitination
-
-
PWY-7511
purine deoxyribonucleosides degradation I
-
-
PWY-7179
purine deoxyribonucleosides degradation II
-
-
PWY-7179-1
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
purine ribonucleosides degradation
-
-
PWY0-1296
putrescine biosynthesis I
-
-
PWY-40
putrescine biosynthesis III
-
-
PWY-46
putrescine degradation III
-
-
PWY-0
pyrimidine deoxyribonucleosides degradation
-
-
PWY-7181
pyrimidine deoxyribonucleosides salvage
-
-
PWY-7199
pyrimidine ribonucleosides degradation
-
-
PWY0-1295
pyrimidine ribonucleosides salvage I
-
-
PWY-7193
pyrimidine ribonucleosides salvage II
-
-
PWY-6556
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
reactive oxygen species degradation
-
-
DETOX1-PWY-1
resolvin D biosynthesis
-
-
PWY66-397
retinol biosynthesis
-
-
PWY-6857
rosmarinic acid biosynthesis I
-
-
PWY-5048
S-adenosyl-L-methionine salvage II
-
-
PWY-5041
salicylate biosynthesis I
-
-
PWY-6406
salicylate biosynthesis II
-
-
PWY-8321
salicylate degradation I
-
-
PWY-6183
salidroside biosynthesis
-
-
PWY-6802
salinosporamide A biosynthesis
-
-
PWY-6627
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
serotonin degradation
-
-
PWY-6313
sesamin biosynthesis
-
-
PWY-5469
sphingosine and sphingosine-1-phosphate metabolism
-
-
PWY3DJ-11470
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sulfur volatiles biosynthesis
-
-
PWY-6736
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of nicotine biosynthesis
-
-
PWY-7342
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
thioredoxin pathway
-
-
THIOREDOX-PWY
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
trehalose biosynthesis I
-
-
TRESYN-PWY
trehalose biosynthesis II
-
-
PWY-881
trehalose biosynthesis III
-
-
TREHALOSESYN-PWY
trehalose degradation II (cytosolic)
-
-
PWY0-1182
trehalose degradation VI (periplasmic)
-
-
PWY0-1466
triacylglycerol degradation
-
-
LIPAS-PWY
urea cycle
urea degradation I
-
-
PWY-5703
vanillin biosynthesis I
-
-
PWY-5665
vernolate biosynthesis III
-
-
PWY-6917
xanthine and xanthosine salvage
-
-
SALVPURINE2-PWY
xanthohumol biosynthesis
-
-
PWY-5135
xanthommatin biosynthesis
-
-
PWY-8249
(5R)-carbapenem carboxylate biosynthesis
-
-
PWY-5737
cyanate degradation
-
-
CYANCAT-PWY
octane oxidation
-
-
P221-PWY
suberin monomers biosynthesis
-
-
PWY-1121
urea cycle
-
-
PWY-4984
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
UniProt
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Pseudomonas syringae pv. tomato)
SILVA: 16S/18S rRNA, 23S/28S rRNA
Use of this online version of BRENDA is free under the CC BY 4.0 license. See terms of use for full details.
Release 2023.1 (January 2023)
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