Reference on EC 4.1.1.11 - aspartate 1-decarboxylase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Williamson, J.M.
L-Aspartate alpha-decarboxylase
Methods Enzymol.
113
589-595
1985
Escherichia coli, Escherichia coli B / ATCC 11303
Manually annotated by BRENDA team
Williamson, J.M.; Brown, G.M.
Purification and properties of L-aspartate-alpha-decarboxylase, an enzyme that catalyzes the formation of beta-alanine in Escherichia coli
J. Biol. Chem.
254
8074-8082
1979
Escherichia coli, Escherichia coli B / ATCC 11303
Manually annotated by BRENDA team
Albert, A.; Dhanaraj, V.; Genschel, U.; Khan, G.; Ramjee, M.K.; Pulido, R.; Sibanda, B.L.; von Delft, F.; Witty, M.; Blundell, T.L.; Smith, A.G.; Abell, C.
Crystal structure of aspartate decarboxylase at 2.2 A resolution provides evidence for an ester in protein self-processing
Nat. Struct. Biol.
5
289-293
1998
Escherichia coli
Manually annotated by BRENDA team
Ramjee, M.K.; Genschel, U.; Abell, C.; Smith, A.G.
Escherichia coli L-aspartate alpha-decarboxylase: preprotein processing and observation of reaction intermediates by electrospray mass spectrometry
Biochem. J.
323
661-669
1997
Escherichia coli
Manually annotated by BRENDA team
Kwon, A.R.; Lee, B.I.; Han, B.W.; Ahn, H.J.; Yang, J.K.; Yoon, H.J.; Suh, S.W.
Crystallization and preliminary X-ray crystallographic analysis of aspartate 1-decarboxylase from Helicobacter pylori
Acta Crystallogr. Sect. D
58
861-863
2002
Helicobacter pylori
Manually annotated by BRENDA team
Dusch, N.; Pühler, A.; Kalinowski, J.
Expression of the Corynebacterium glutamicum panD gene encoding L-aspartate-alpha-decarboxylase leads to pantothenate overproduction in Escherichia coli
Appl. Environ. Microbiol.
65
1530-1539
1999
Corynebacterium glutamicum, Corynebacterium glutamicum (Q9X4N0), Escherichia coli, Escherichia coli (P0A790), Escherichia coli MG1655 (P0A790)
Manually annotated by BRENDA team
Saldanha, S.A.; Birch, L.M.; Webb, M.E.; Nabbs, B.K.; von Delft, F.; Smith, A.G.; Abell, C.
Identification of Tyr58 as the proton donor in the aspartate-alpha-decarboxylase reaction
Chem. Commun. (Camb.)
2001
1760-1761
2001
Escherichia coli
-
Manually annotated by BRENDA team
Schmitzberger, F.; Kilkenny, M.L.; Lobley, C.M.C.; Webb, M.E.; Vinkovic, M.; Matak-Vinkovic, D.; Witty, M.; Chirgadze, D.Y.; Smith, A.G.; Abell, C.; Blundell, T.L.
Structural constraints on protein self-processing in L-aspartate-alpha-decarboxylase
EMBO J.
22
6193-6204
2003
Escherichia coli (P0A790)
Manually annotated by BRENDA team
Chopra, S.; Pai, H.; Ranganathan, A.
Expression, purification, and biochemical characterization of Mycobacterium tuberculosis aspartate decarboxylase, PanD
Protein Expr. Purif.
25
533-540
2002
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
Manually annotated by BRENDA team
Phillips, A.M.; Smart, R.; Strauss, R.; Brembs, B.; Kelly, L.E.
The Drosophila black enigma: The molecular and behavioural characterization of the black1 mutant allele
Gene
351
131-142
2005
Drosophila melanogaster
Manually annotated by BRENDA team
Lee, B.I.; Suh, S.W.
Crystal structure of the Schiff base intermediate prior to decarboxylation in the catalytic cycle of aspartate alpha-decarboxylase
J. Mol. Biol.
340
1-7
2004
Helicobacter pylori, Helicobacter pylori (P56065)
Manually annotated by BRENDA team
Fouad, W.M.; Rathinasabapathi, B.
Expression of bacterial L-aspartate-alpha-decarboxylase in tobacco increases beta-alanine and pantothenate levels and improves thermotolerance
Plant Mol. Biol.
60
495-505
2006
Escherichia coli
Manually annotated by BRENDA team
Gopalan, G.; Chopra, S.; Ranganathan, A.; Swaminathan, K.
Crystal structure of uncleaved L-aspartate-alpha-decarboxylase from Mycobacterium tuberculosis
Proteins
65
796-802
2006
Mycobacterium tuberculosis
Manually annotated by BRENDA team
Arakane, Y.; Lomakin, J.; Beeman, R.W.; Muthukrishnan, S.; Gehrke, S.H.; Kanost, M.R.; Kramer, K.J.
Molecular and functional analyses of amino acid decarboxylases involved in cuticle tanning in Tribolium castaneum
J. Biol. Chem.
284
16584-16594
2009
Tribolium castaneum (A7U8C7), Tribolium castaneum, Tribolium castaneum GA-1 (A7U8C7)
Manually annotated by BRENDA team
Fouad, W.M.; Altpeter, F.
Transplastomic expression of bacterial L-aspartate-alpha-decarboxylase enhances photosynthesis and biomass production in response to high temperature stress
Transgenic Res.
18
707-718
2009
Escherichia coli
Manually annotated by BRENDA team
Lomakin, J.; Huber, P.A.; Eichler, C.; Arakane, Y.; Kramer, K.J.; Beeman, R.W.; Kanost, M.R.; Gehrke, S.H.
Mechanical properties of the beetle elytron, a biological composite material
Biomacromolecules
12
321-335
2011
Tribolium castaneum
Manually annotated by BRENDA team
de Villiers, J.; Koekemoer, L.; Strauss, E.
3-Fluoroaspartate and pyruvoyl-dependant aspartate decarboxylase: exploiting the unique characteristics of fluorine to probe reactivity and binding
Chemistry
16
10030-10041
2010
Escherichia coli, Mycobacterium tuberculosis
Manually annotated by BRENDA team
Webb, M.; Yorke, B.; Kershaw, T.; Lovelock, S.; Lobley, C.; Kilkenny, M.; Smith, A.; Blundell, T.; Pearson, A.; Abell, C.
Threonine 57 is required for the post-translational activation of Escherichia coli aspartate alpha-decarboxylase
Acta Crystallogr. Sect. D
70
1166-1172
2014
Escherichia coli (P0A790)
-
Manually annotated by BRENDA team
Webb, M.E.; Lobley, C.M.; Soliman, F.; Kilkenny, M.L.; Smith, A.G.; Blundell, T.L.; Abell, C.
Structure of Escherichia coli aspartate alpha-decarboxylase Asn72Ala: probing the role of Asn72 in pyruvoyl cofactor formation
Acta Crystallogr. Sect. F
68
414-417
2012
Escherichia coli (P0A790)
Manually annotated by BRENDA team
Monteiro, D.C.; Rugen, M.D.; Shepherd, D.; Nozaki, S.; Niki, H.; Webb, M.E.
Formation of a heterooctameric complex between aspartate alpha-decarboxylase and its cognate activating factor, PanZ, is CoA-dependent
Biochem. Biophys. Res. Commun.
426
350-355
2012
Escherichia coli
Manually annotated by BRENDA team
Cui, W.; Shi, Z.; Fang, Y.; Zhou, L.; Ding, N.; Zhou, Z.
Significance of Arg3, Arg54, and Tyr58 of L-aspartate alpha-decarboxylase from Corynebacterium glutamicum in the process of self-cleavage
Biotechnol. Lett.
36
121-126
2014
Corynebacterium glutamicum (Q9X4N0), Corynebacterium glutamicum ATCC 13032 (Q9X4N0)
Manually annotated by BRENDA team
Shen, Y.; Zhao, L.; Li, Y.; Zhang, L.; Shi, G.
Synthesis of beta-alanine from L-aspartate using L-aspartate-alpha-decarboxylase from Corynebacterium glutamicum
Biotechnol. Lett.
36
1681-1686
2014
Corynebacterium glutamicum (Q9X4N0), Corynebacterium glutamicum ATCC 13032 (Q9X4N0)
Manually annotated by BRENDA team
Liu, P.; Ding, H.; Christensen, B.M.; Li, J.
Cysteine sulfinic acid decarboxylase activity of Aedes aegypti aspartate 1-decarboxylase: the structural basis of its substrate selectivity
Insect Biochem. Mol. Biol.
42
396-403
2012
Aedes aegypti, Drosophila melanogaster
Manually annotated by BRENDA team
Wang, Y.; Xu, H.; White, R.H.
beta-Alanine biosynthesis in Methanocaldococcus jannaschii
J. Bacteriol.
196
2869-2875
2014
Methanocaldococcus jannaschii, Methanocaldococcus jannaschii (Q60358), Methanocaldococcus jannaschii DSM 2661 (Q60358)
Manually annotated by BRENDA team
Stuecker, T.; Tucker, A.; Escalante-Semerena, J.
PanM, an acetyl-coenzyme a sensor required for maturation of L-aspartate decarboxylase (PanD)
mBio
3
e00158-12
2012
Salmonella enterica, Salmonella enterica DM10310
-
Manually annotated by BRENDA team
Nozaki, S.; Webb, M.E.; Niki, H.
An activator for pyruvoyl-dependent l-aspartate alpha-decarboxylase is conserved in a small group of the gamma-proteobacteria including Escherichia coli
MicrobiologyOpen
1
298-310
2012
Escherichia coli, Escherichia coli MG1655
Manually annotated by BRENDA team
Stuecker, T.N.; Hodge, K.M.; Escalante-Semerena, J.C.
The missing link in coenzyme A biosynthesis: PanM (formerly YhhK), a yeast GCN5 acetyltransferase homologue triggers aspartate decarboxylase (PanD) maturation in Salmonella enterica
Mol. Microbiol.
84
608-619
2012
Corynebacterium glutamicum, Salmonella enterica
Manually annotated by BRENDA team
Sharma, R.; Kothapalli, R.; Van Dongen, A.M.; Swaminathan, K.
Chemoinformatic identification of novel inhibitors against Mycobacterium tuberculosis L-aspartate alpha-decarboxylase
PLoS ONE
7
e33521
2012
Mycobacterium tuberculosis
Manually annotated by BRENDA team
Sharma, R.; Florea, M.; Nau, W.M.; Swaminathan, K.
Validation of drug-like inhibitors against Mycobacterium tuberculosis L-aspartate alpha-decarboxylase using nuclear magnetic resonance (1H NMR)
PLoS ONE
7
e45947
2012
Mycobacterium tuberculosis
Manually annotated by BRENDA team
Lee, E.; Kim, H.; Kim, D.; Kim, Y.; Nam, S.; Kim, B.; Jeon, S.
Gene expression and characterization of thermostable glutamate decarboxylase from Pyrococcus furiosus
Biotechnol. Bioprocess Eng.
18
375-381
2013
Pyrococcus furiosus (Q8U1P6)
-
Manually annotated by BRENDA team
Gopal, P.; Tasneen, R.; Yee, M.; Lanoix, J.; Sarathy, J.; Rasic, G.; Li, L.; Dartois, V.; Nuermberger, E.; Dick, T.
In vivo-selected pyrazinoic acid-resistant Mycobacterium tuberculosis strains harbor missense mutations in the aspartate decarboxylase PanD and the unfoldase ClpC1
ACS Infect. Dis.
3
492-501
2017
Mycobacterium tuberculosis
Manually annotated by BRENDA team
Pei, W.; Zhang, J.; Deng, S.; Tigu, F.; Li, Y.; Li, Q.; Cai, Z.; Li, Y.
Molecular engineering of L-aspartate-alpha-decarboxylase for improved activity and catalytic stability
Appl. Microbiol. Biotechnol.
101
6015-6021
2017
Bacillus subtilis 168 (P52999), Bacillus subtilis (P52999), Corynebacterium glutamicum (Q9X4N0), Corynebacterium glutamicum ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025 (Q9X4N0), Escherichia coli (P0A790), Escherichia coli K-12 / DH5alpha (P0A790)
Manually annotated by BRENDA team
Arnott, Z.L.P.; Nozaki, S.; Monteiro, D.C.F.; Morgan, H.E.; Pearson, A.R.; Niki, H.; Webb, M.E.
The mechanism of regulation of pantothenate biosynthesis by the PanD-PanZ-AcCoA complex reveals an additional mode of action for the antimetabolite N-pentyl pantothenamide (N5-Pan)
Biochemistry
56
4931-4939
2017
Escherichia coli
Manually annotated by BRENDA team
Shen, Y.; Zhao, L.; Li, Y.; Zhang, L.; Shi, G.
Synthesis of beta-alanine from L-aspartate using L-aspartate-alpha-decarboxylase from Corynebacterium glutamicum
Biotechnol. Lett.
36
1681-1686
2014
Corynebacterium glutamicum (Q9X4N0), Corynebacterium glutamicum ATCC 13032 (Q9X4N0)
Manually annotated by BRENDA team
Stuecker, T.N.; Bramhacharya, S.; Hodge-Hanson, K.M.; Suen, G.; Escalante-Semerena, J.C.
Phylogenetic and amino acid conservation analyses of bacterial L-aspartate-alpha-decarboxylase and of its zymogen-maturation protein reveal a putative interaction domain
BMC Res. Notes
8
354
2015
Bacillus halodurans, Bacillus halodurans ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125, Bordetella pertussis (Q7VXF8), Bordetella pertussis Tohama I / ATCC BAA-589 / NCTC 13251 (Q7VXF8), Corynebacterium glutamicum (Q9X4N0), Corynebacterium glutamicum ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025 (Q9X4N0), Helicobacter pylori (P56065), Helicobacter pylori 26695 (P56065), Klebsiella pneumoniae (A6T4S8), Klebsiella pneumoniae ATCC 700721 / MGH 78578 (A6T4S8), Legionella pneumophila, Magnetospirillum magneticum (Q2VZZ9), Magnetospirillum magneticum AMB-1 / ATCC 700264 (Q2VZZ9), Moorella thermoacetica (Q2RM59), Moorella thermoacetica ATCC 39073 / JCM 9320 (Q2RM59), Neisseria gonorrhoeae (Q5F8Y9), Neisseria gonorrhoeae ATCC 700825 / FA 1090 (Q5F8Y9), Pseudomonas aeruginosa (Q9HV68), Pseudomonas aeruginosa ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1 (Q9HV68), Ralstonia solanacearum (Q8XVU6), Salmonella enterica subsp. enterica serovar Typhimurium (P65662), Salmonella enterica subsp. enterica serovar Typhimurium LT2 / SGSC1412 / ATCC 700720 (P65662)
Manually annotated by BRENDA team
Monteiro, D.C.F.; Patel, V.; Bartlett, C.P.; Nozaki, S.; Grant, T.D.; Gowdy, J.A.; Thompson, G.S.; Kalverda, A.P.; Snell, E.H.; Niki, H.; Pearson, A.R.; Webb, M.E.
The structure of the PanD/PanZ protein complex reveals negative feedback regulation of pantothenate biosynthesis by coenzyme A
Chem. Biol.
22
492-503
2015
Escherichia coli
Manually annotated by BRENDA team
Deng, S.; Zhang, J.; Cai, Z.; Li, Y.
Characterization of L-aspartate-alpha-decarboxylase from Bacillus subtilis
Chin. J. Biotechnol.
31
1184-1193
2015
Bacillus subtilis 168 (P52999), Bacillus subtilis (P52999), Corynebacterium glutamicum (Q9X4N0), Corynebacterium glutamicum DSM 20300 (Q9X4N0), Escherichia coli (P0A790)
Manually annotated by BRENDA team
Gliessman, J.R.; Kremer, T.A.; Sangani, A.A.; Jones-Burrage, S.E.; McKinlay, J.B.
Pantothenate auxotrophy in Zymomonas mobilis ZM4 is due to a lack of aspartate decarboxylase activity
FEMS Microbiol. Lett.
364
fnx113
2017
Escherichia coli, Escherichia coli (P0A790), no activity in Zymomonas mobilis, no activity in Zymomonas mobilis ZM4 / ATCC 31821 / CP4
Manually annotated by BRENDA team
Tomita, H.; Yokooji, Y.; Ishibashi, T.; Imanaka, T.; Atomi, H.
An archaeal glutamate decarboxylase homolog functions as an aspartate decarboxylase and is involved in beta-alanine and coenzyme A biosynthesis
J. Bacteriol.
196
1222-1230
2014
Thermococcus kodakarensis (Q5JJ82), Thermococcus kodakarensis, Thermococcus kodakarensis ATCC BAA-918 / JCM 12380 / KOD1 (Q5JJ82)
Manually annotated by BRENDA team
Zhang, T.; Zhang, R.; Xu, M.; Zhang, X.; Yang, T.; Liu, F.; Yang, S.; Rao, Z.
Glu56Ser mutation improves the enzymatic activity and catalytic stability of Bacillus subtilis L-aspartate alpha-decarboxylase for an efficient beta-alanine production
Process Biochem.
70
117-123
2018
Bacillus subtilis (P52999), Bacillus subtilis 168 (P52999), Corynebacterium glutamicum (Q9X4N0), Corynebacterium glutamicum ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025 (Q9X4N0), Escherichia coli (P0A790), Lactobacillus plantarum (Q88Z02), Lactobacillus plantarum ATCC BAA-793 / NCIMB 8826 / WCFS1 (Q88Z02)
-
Manually annotated by BRENDA team
Dai, F.; Qiao, L.; Cao, C.; Liu, X.; Tong, X.; He, S.; Hu, H.; Zhang, L.; Wu, S.; Tan, D.; Xiang, Z.; Lu, C.
Aspartate decarboxylase is required for a normal pupa pigmentation pattern in the silkworm, Bombyx mori
Sci. Rep.
5
10885
2015
Bombyx mori, Bombyx mori (H9JRC8)
Manually annotated by BRENDA team