Any feedback?
BRENDA home
Organism related
Word Map for Organism Rubus idaeus
- Rubus idaeus
- glen
- anthocyanins
-
latham
- blackberry
- ellagitannins
-
strigosus
-
bliss
-
bushy
-
sanguiin
-
willamette
-
primocane
TaxTree of Organism Rubus idaeus
Condensed Tree View
Please wait a moment until all data is loaded. This message will disappear when all data is loaded.
topPlease wait a moment until the data is sorted. This message will disappear when the data is sorted.
EC NUMBER 
COMMENTARY 
-
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,5-anhydrofructose degradation
-
-
PWY-6992
24-epi-campesterol, fucosterol, and clionasterol biosynthesis (diatoms)
-
-
PWY-8238
3-methyl-branched fatty acid alpha-oxidation
-
-
PWY66-387
3-phosphoinositide degradation
-
-
PWY-6368
4-coumarate degradation (aerobic)
-
-
PWY-8002
4-coumarate degradation (anaerobic)
-
-
PWY-7046
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxybenzoate biosynthesis III (plants)
-
-
PWY-6435
6-gingerol analog biosynthesis (engineered)
-
-
PWY-6920
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
alkane biosynthesis II
-
-
PWY-7033
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anthocyanin biosynthesis
-
-
PWY-5125
anthocyanin biosynthesis (pelargonidin 3-O-glucoside)
-
-
PWY-7267
arachidonate metabolites biosynthesis
-
-
PWY-8397
aromatic polyketides biosynthesis
-
-
PWY-6316
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
avenanthramide biosynthesis
-
-
PWY-8157
bacilysin biosynthesis
-
-
PWY-7626
bacterial bioluminescence
-
-
PWY-7723
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
-
-
PWY-6444
Bifidobacterium shunt
-
-
P124-PWY
bile acid biosynthesis, neutral pathway
bryostatin biosynthesis
-
-
PWY-8047
bupropion degradation
-
-
PWY66-241
C20 prostanoid biosynthesis
-
-
PWY66-374
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
caffeoylglucarate biosynthesis
-
-
PWY-6673
camalexin biosynthesis
-
-
CAMALEXIN-SYN
capsaicin biosynthesis
-
-
PWY-5710
cellulose degradation II (fungi)
-
-
PWY-6788
ceramide and sphingolipid recycling and degradation (yeast)
-
-
PWY-7119
ceramide degradation by alpha-oxidation
-
-
PWY66-388
chitin biosynthesis
-
-
PWY-6981
cholesterol biosynthesis (algae, late side-chain reductase)
-
-
PWY-8191
cholesterol biosynthesis (diatoms)
-
-
PWY-8239
cholesterol biosynthesis (plants, early side-chain reductase)
-
-
PWY18C3-1
cholesterol biosynthesis I
-
-
PWY66-341
cholesterol biosynthesis II (via 24,25-dihydrolanosterol)
-
-
PWY66-3
cinnamate esters biosynthesis
-
-
PWY-5968
cinnamoyl-CoA biosynthesis
-
-
PWY-6457
coumarins biosynthesis (engineered)
-
-
PWY-7398
creatine phosphate biosynthesis
-
-
PWY-6158
curcuminoid biosynthesis
-
-
PWY-6432
cutin biosynthesis
-
-
PWY-321
D-sorbitol biosynthesis I
-
-
PWY-5054
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
diacylglycerol and triacylglycerol biosynthesis
-
-
TRIGLSYN-PWY
diethylphosphate degradation
-
-
PWY-5491
ephedrine biosynthesis
-
-
PWY-5883
erythromycin D biosynthesis
-
-
PWY-7106
ethanol degradation IV
-
-
PWY66-162
ethene biosynthesis I (plants)
-
-
ETHYL-PWY
ethene biosynthesis III (microbes)
-
-
PWY-6854
farnesene biosynthesis
-
-
PWY-5725
fatty acid biosynthesis initiation (mitochondria)
-
-
PWY66-429
fatty acid biosynthesis initiation (plant mitochondria)
-
-
PWY-6799
fatty acid biosynthesis initiation (type II)
-
-
PWY-4381
fatty acid salvage
-
-
PWY-7094
Fe(II) oxidation
-
-
PWY-6692
flavonoid biosynthesis
-
-
PWY1F-FLAVSYN
flavonoid biosynthesis (in equisetum)
-
-
PWY-6787
flavonoid di-C-glucosylation
-
-
PWY-7897
flavonol biosynthesis
-
-
PWY-3101
folate transformations I
-
-
PWY-2201
folate transformations II (plants)
-
-
PWY-3841
folate transformations III (E. coli)
-
-
1CMET2-PWY
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde oxidation I
-
-
RUMP-PWY
gamma-linolenate biosynthesis II (animals)
-
-
PWY-6000
GDP-mannose biosynthesis
-
-
PWY-5659
gliotoxin biosynthesis
-
-
PWY-7533
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucose degradation (oxidative)
-
-
DHGLUCONATE-PYR-CAT-PWY
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glutathione-peroxide redox reactions
-
-
PWY-4081
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis V (Pyrococcus)
-
-
P341-PWY
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
heme degradation I
-
-
PWY-5874
heterolactic fermentation
-
-
P122-PWY
icosapentaenoate biosynthesis II (6-desaturase, mammals)
-
-
PWY-7049
icosapentaenoate biosynthesis III (8-desaturase, mammals)
-
-
PWY-7724
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
isoprene biosynthesis II (engineered)
-
-
PWY-7391
L-arginine degradation V (arginine deiminase pathway)
-
-
ARGDEGRAD-PWY
L-arginine degradation XIII (reductive Stickland reaction)
-
-
PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
-
-
PWY-6344
L-histidine degradation V
-
-
PWY-5031
L-methionine biosynthesis I
-
-
HOMOSER-METSYN-PWY
L-methionine biosynthesis III
-
-
HSERMETANA-PWY
L-methionine salvage cycle II (plants)
-
-
PWY-7270
L-methionine salvage from L-homocysteine
-
-
ADENOSYLHOMOCYSCAT-PWY
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine biosynthesis II
-
-
PWY-3462
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine biosynthesis II
-
-
PWY-3461
L-tyrosine biosynthesis III
-
-
PWY-6120
leucodelphinidin biosynthesis
-
-
PWY-5152
leucopelargonidin and leucocyanidin biosynthesis
-
-
PWY1F-823
linoleate biosynthesis II (animals)
-
-
PWY-6001
lipid A-core biosynthesis (E. coli K-12)
-
-
LIPA-CORESYN-PWY
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
long-chain fatty acid activation
-
-
PWY-5143
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
melatonin degradation I
-
-
PWY-6398
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methylaspartate cycle
mevalonate pathway I (eukaryotes and bacteria)
-
-
PWY-922
mevalonate pathway II (haloarchaea)
-
-
PWY-6174
mevalonate pathway III (Thermoplasma)
-
-
PWY-7524
mevalonate pathway IV (archaea)
-
-
PWY-8125
mixed acid fermentation
-
-
FERMENTATION-PWY
mupirocin biosynthesis
-
-
PWY-8012
mycobactin biosynthesis
-
-
PWY185E-1
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
naringenin biosynthesis (engineered)
-
-
PWY-7397
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrogen remobilization from senescing leaves
-
-
PWY-6549
nocardicin A biosynthesis
-
-
PWY-7797
o-diquinones biosynthesis
-
-
PWY-6752
octane oxidation
oleate beta-oxidation
-
-
PWY0-1337
oleate biosynthesis I (plants)
-
-
PWY-5147
oleate biosynthesis II (animals and fungi)
-
-
PWY-5996
palmitate biosynthesis II (type II fatty acid synthase)
-
-
PWY-5971
palmitate biosynthesis III
-
-
PWY-8279
palmitoleate biosynthesis IV (fungi and animals)
-
-
PWY3O-1801
pectin degradation I
-
-
PWY-7246
pectin degradation II
-
-
PWY-7248
pederin biosynthesis
-
-
PWY-8049
pentachlorophenol degradation
-
-
PCPDEG-PWY
phaselate biosynthesis
-
-
PWY-6320
phenylpropanoid biosynthesis
-
-
PWY-361
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
phloridzin biosynthesis
-
-
PWY-6515
phosphatidylcholine acyl editing
-
-
PWY-6803
phytol degradation
-
-
PWY66-389
phytosterol biosynthesis (plants)
-
-
PWY-2541
pinobanksin biosynthesis
-
-
PWY-5059
proanthocyanidins biosynthesis from flavanols
-
-
PWY-641
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to propanoate I
-
-
P108-PWY
raspberry ketone biosynthesis
-
-
PWY-5393
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
rosmarinic acid biosynthesis I
-
-
PWY-5048
rutin biosynthesis
-
-
PWY-5390
salinosporamide A biosynthesis
-
-
PWY-6627
sorgoleone biosynthesis
-
-
PWY-5987
sphingosine and sphingosine-1-phosphate metabolism
-
-
PWY3DJ-11470
sporopollenin precursors biosynthesis
-
-
PWY-6733
starch biosynthesis
-
-
PWY-622
stearate biosynthesis I (animals)
-
-
PWY-5972
stearate biosynthesis II (bacteria and plants)
-
-
PWY-5989
stearate biosynthesis IV
-
-
PWY-8280
sterol biosynthesis (methylotrophs)
-
-
PWY-8026
sterol:steryl ester interconversion (yeast)
-
-
PWY-7424
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation IV (sucrose phosphorylase)
-
-
PWY-5384
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
syringetin biosynthesis
-
-
PWY-5391
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VIII (Chlamydia)
-
-
TCA-1
teichuronic acid biosynthesis (B. subtilis 168)
-
-
PWY-7820
trans-caffeate degradation (aerobic)
-
-
PWY-8003
triacylglycerol degradation
-
-
LIPAS-PWY
UDP-N-acetyl-D-galactosamine biosynthesis I
-
-
PWY-5512
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
umbelliferone biosynthesis
-
-
PWY-6982
UTP and CTP dephosphorylation II
-
-
PWY-7177
vanillin biosynthesis I
-
-
PWY-5665
wax esters biosynthesis II
-
-
PWY-5885
xanthohumol biosynthesis
-
-
PWY-5135
zymosterol biosynthesis
-
-
PWY-6074
bile acid biosynthesis, neutral pathway
-
-
PWY-6061
methylaspartate cycle
-
-
PWY-6728
octane oxidation
-
-
P221-PWY
suberin monomers biosynthesis
-
-
PWY-1121
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
additional information
-
protein content of the enzyme in the different plants and tissue preparations obtained with two different protocols
the transcripts of RiPKS4 and RiPKS5 accumulate at a lower level during fruit development in comparison to RiPKS1
transcript accumulation of ACS1 is detected at a low level only in the later stage of fruit ripening
transcript of RiPKS4 accumulates at a lower level during fruit development in comparison to RiPKS1, the gene transcript is not detected during the early stage 1 for RiPKS4 of fruit development
-
type III polyketide synthases expression patterns during fruit development, overview
LINKS TO OTHER DATABASES (specific for Rubus idaeus)
SILVA: 16S/18S rRNA, 23S/28S rRNA
Use of this online version of BRENDA is free under the CC BY 4.0 license. See terms of use for full details.
Release 2023.1 (January 2023)
Legal
Curated at
Member of
