Any feedback?
Please rate this page
(organism.php)
(0/150)

BRENDA support

Information on Organism Candidatus Pelagibacter ubique

Synonyms:
Candidatus Pelagibacter ubique Rappe et al. 2002; Candidatus Pelagibacter ubique; HTCC1062; "Candidatus Pelagibacter ubique" Rappe et al. 2002; Pelagibacter ubique;
Word Map for Organism Candidatus Pelagibacter ubique
TaxTree of Organism Candidatus Pelagibacter ubique
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Alphaproteobacteria can be found in Brenda BRENDA pathways(class)
Pelagibacterales can be found in Brenda BRENDA pathways(order)
Pelagibacteraceae can be found in Brenda (family)
Candidatus Pelagibacter can be found in Brenda BRENDA pathways(genus)
Candidatus Pelagibacter ubique can be found in Brenda BRENDA pathways(species)
Please wait a moment until all data is loaded. This message will disappear when all data is loaded.
top print hide
top print hide
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
2-methylpropene degradation
-
-
PWY-7778
alanine metabolism
-
-
alanine racemization
-
-
PWY-8072
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
ansatrienin biosynthesis
-
-
PWY-8040
arachidonate metabolites biosynthesis
-
-
PWY-8397
Arachidonic acid metabolism
-
-
arachidonic acid metabolism
-
-
Arginine and proline metabolism
-
-
baicalein degradation (hydrogen peroxide detoxification)
-
-
PWY-7214
betanidin degradation
-
-
PWY-5461
Biosynthesis of secondary metabolites
-
-
Chloroalkane and chloroalkene degradation
-
-
creatinine degradation
-
-
creatinine degradation I
-
-
CRNFORCAT-PWY
creatinine degradation II
-
-
PWY-4722
Cysteine and methionine metabolism
-
-
D-Amino acid metabolism
-
-
dimethylsulfoniopropanoate degradation I (cleavage)
-
-
PWY-6046
dimethylsulfoniopropanoate degradation III (demethylation)
-
-
PWY-6052
dissimilatory sulfate reduction I (to hydrogen sufide))
-
-
DISSULFRED-PWY
docosahexaenoate metabolites biosynthesis
-
-
PWY-8400
glucosinolate biosynthesis from dihomomethionine
-
-
PWYQT-4471
glucosinolate biosynthesis from hexahomomethionine
-
-
PWYQT-4475
glucosinolate biosynthesis from homomethionine
-
-
PWY-1187
glucosinolate biosynthesis from pentahomomethionine
-
-
PWYQT-4474
glucosinolate biosynthesis from phenylalanine
-
-
PWY-2821
glucosinolate biosynthesis from tetrahomomethionine
-
-
PWYQT-4473
glucosinolate biosynthesis from trihomomethionine
-
-
PWYQT-4472
glucosinolate biosynthesis from tryptophan
-
-
PWY-601
glucosinolate biosynthesis from tyrosine
-
-
PWY-7901
Glutathione metabolism
-
-
glutathione-mediated detoxification II
-
-
PWY-6842
glycine betaine degradation I
-
-
PWY-3661
glycine biosynthesis II
-
-
GLYCINE-SYN2-PWY
glycine cleavage
-
-
GLYCLEAV-PWY
Glycine, serine and threonine metabolism
-
-
homocysteine and cysteine interconversion
-
-
PWY-801
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
justicidin B biosynthesis
-
-
PWY-6824
L-alanine degradation I
-
-
ALADEG-PWY
L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)
-
-
ARGDEG-III-PWY
L-methionine biosynthesis I
-
-
HOMOSER-METSYN-PWY
linoleate metabolites biosynthesis
-
-
PWY-8395
lipid metabolism
-
-
luteolin triglucuronide degradation
-
-
PWY-7445
maresin biosynthesis
-
-
PWY-8356
matairesinol biosynthesis
-
-
PWY-5466
Metabolic pathways
-
-
Methane metabolism
-
-
methionine metabolism
-
-
methylthiopropanoate degradation I (cleavage)
-
-
PWY-6048
Microbial metabolism in diverse environments
-
-
non-pathway related
-
-
Phenylpropanoid biosynthesis
-
-
poly-hydroxy fatty acids biosynthesis
-
-
PWY-6710
polyamine pathway
-
-
Porphyrin and chlorophyll metabolism
-
-
putrescine biosynthesis II
-
-
PWY-43
putrescine biosynthesis III
-
-
PWY-46
S-(6-hydroxy-4-methylhexan-4-yl)-L-cysteinylglycine degradation
-
-
PWY-8302
seleno-amino acid biosynthesis (plants)
-
-
PWY-6936
Selenocompound metabolism
-
-
sesamin biosynthesis
-
-
PWY-5469
spermidine biosynthesis I
-
-
BSUBPOLYAMSYN-PWY
spermidine biosynthesis III
-
-
PWY-6834
spermine biosynthesis
-
-
ARGSPECAT-PWY
sulfate reduction
-
-
sulfite oxidation II
-
-
PWY-5279
sulfite oxidation III
-
-
PWY-5278
Sulfur metabolism
-
-
superpathway of dimethylsulfoniopropanoate degradation
-
-
PWY-6049
superpathway of ornithine degradation
-
-
ORNDEG-PWY
trimethylamine degradation
-
-
PWY-6968
trimethylamine N-oxide biosynthesis
-
-
PWY-8292
xanthommatin biosynthesis
-
-
PWY-8249
top print hide
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
top print hide
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
top
LINKS TO OTHER DATABASES (specific for Candidatus Pelagibacter ubique)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA