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TaxTree of Organism Escherichia coli XL1-Blue
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PATHWAY 
BRENDA Link
KEGG Link
MetaCyc Link
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
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PWY-7726
(8E,10E)-dodeca-8,10-dienol biosynthesis
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PWY-7654
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
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PWY-7216
(R)-cysteate degradation
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PWY-6642
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-reticuline biosynthesis I
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PWY-3581
1,2-propanediol biosynthesis from lactate (engineered)
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PWY-7541
1,5-anhydrofructose degradation
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PWY-6992
10-cis-heptadecenoyl-CoA degradation (yeast)
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PWY-7337
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
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PWY-7339
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
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PWY-7338
2'-deoxymugineic acid phytosiderophore biosynthesis
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PWY-5912
2-arachidonoylglycerol biosynthesis
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PWY-8052
2-deoxy-D-glucose 6-phosphate degradation
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PWY-8121
2-deoxy-D-ribose degradation II
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PWY-8058
2-methyl-branched fatty acid beta-oxidation
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PWY-8181
2-methylcitrate cycle I
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PWY0-42
2-methylcitrate cycle II
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PWY-5747
2-methylpropene degradation
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PWY-7778
3-(4-hydroxyphenyl)pyruvate biosynthesis
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PWY-5886
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
3-phenylpropanoate degradation
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P281-PWY
4-aminobutanoate degradation V
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PWY-5022
4-ethylphenol degradation (anaerobic)
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PWY-6080
4-hydroxy-2-nonenal detoxification
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PWY-7112
4-hydroxybenzoate biosynthesis I (eukaryotes)
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PWY-5754
4-hydroxybenzoate biosynthesis III (plants)
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PWY-6435
4-oxopentanoate degradation
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PWY-7948
5'-deoxyadenosine degradation II
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PWY-8131
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
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PWY-7340
acetoacetate degradation (to acetyl CoA)
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ACETOACETATE-DEG-PWY
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acetyl-CoA fermentation to butanoate
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PWY-5676
acrylate degradation II
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PWY-8180
acrylonitrile degradation I
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PWY-7308
adipate biosynthesis
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PWY-8347
adipate degradation
Amaryllidacea alkaloids biosynthesis
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PWY-7826
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
androstenedione degradation I (aerobic)
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PWY-6944
androstenedione degradation II (anaerobic)
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PWY-8152
atromentin biosynthesis
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PWY-7518
autoinducer AI-2 biosynthesis I
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PWY-6153
autoinducer AI-2 biosynthesis II (Vibrio)
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PWY-6154
bacilysin biosynthesis
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PWY-7626
bacterial bioluminescence
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PWY-7723
benzoate biosynthesis I (CoA-dependent, beta-oxidative)
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PWY-6443
benzoyl-CoA biosynthesis
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PWY-6458
benzoyl-CoA degradation I (aerobic)
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PWY-1361
beta-alanine biosynthesis II
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PWY-3941
Bifidobacterium shunt
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P124-PWY
bile acid biosynthesis, neutral pathway
bupropion degradation
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PWY66-241
C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
camalexin biosynthesis
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CAMALEXIN-SYN
capsiconiate biosynthesis
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PWY-6027
cellulose degradation II (fungi)
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PWY-6788
chitin degradation I (archaea)
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PWY-6855
chitin degradation II (Vibrio)
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PWY-6902
chitin degradation III (Serratia)
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PWY-7822
cholesterol degradation to androstenedione I (cholesterol oxidase)
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PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
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PWY-6946
coenzyme M biosynthesis II
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PWY-6643
crotonate fermentation (to acetate and cyclohexane carboxylate)
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PWY-7401
cuticular wax biosynthesis
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PWY-282
cutin biosynthesis
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PWY-321
degradation of aromatic, nitrogen containing compounds
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diacylglycerol and triacylglycerol biosynthesis
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TRIGLSYN-PWY
dipicolinate biosynthesis
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PWY-8088
docosahexaenoate biosynthesis III (6-desaturase, mammals)
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PWY-7606
Entner-Doudoroff pathway I
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PWY-8004
erythromycin D biosynthesis
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PWY-7106
ethene biosynthesis I (plants)
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ETHYL-PWY
ethylbenzene degradation (anaerobic)
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PWY-481
ethylmalonyl-CoA pathway
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PWY-5741
fatty acid beta-oxidation I (generic)
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FAO-PWY
fatty acid beta-oxidation II (plant peroxisome)
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PWY-5136
fatty acid beta-oxidation VI (mammalian peroxisome)
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PWY66-391
fatty acid beta-oxidation VII (yeast peroxisome)
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PWY-7288
fatty acid salvage
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PWY-7094
ferulate and sinapate biosynthesis
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PWY-5168
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
gallate degradation III (anaerobic)
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P3-PWY
gliotoxin biosynthesis
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PWY-7533
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis III
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PWY66-399
glutaryl-CoA degradation
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PWY-5177
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glycerol degradation to butanol
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PWY-7003
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
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PWY-7900
glycogen degradation I
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GLYCOCAT-PWY
glycogen degradation II
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PWY-5941
glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
heterolactic fermentation
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P122-PWY
homocysteine and cysteine interconversion
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PWY-801
hydrogen sulfide biosynthesis II (mammalian)
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PWY66-426
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
indole-3-acetate biosynthesis VI (bacteria)
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TRPIAACAT-PWY
isoflavonoid biosynthesis I
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PWY-2002
isoflavonoid biosynthesis II
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PWY-2083
isoprene biosynthesis II (engineered)
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PWY-7391
isopropanol biosynthesis (engineered)
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PWY-6876
jasmonic acid biosynthesis
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PWY-735
ketogenesis
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PWY66-367
ketolysis
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PWY66-368
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-asparagine degradation III (mammalian)
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ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
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ASPARTATESYN-PWY
L-aspartate degradation I
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ASPARTATE-DEG1-PWY
L-cysteine biosynthesis III (from L-homocysteine)
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HOMOCYSDEGR-PWY
L-cysteine biosynthesis VI (reverse transsulfuration)
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PWY-I9
L-glutamate degradation II
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GLUTDEG-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-isoleucine biosynthesis II
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PWY-5101
L-isoleucine biosynthesis IV
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PWY-5104
L-isoleucine degradation I
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ILEUDEG-PWY
L-lysine biosynthesis I
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DAPLYSINESYN-PWY
L-lysine biosynthesis II
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PWY-2941
L-lysine biosynthesis III
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PWY-2942
L-lysine biosynthesis VI
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PWY-5097
L-lysine fermentation to acetate and butanoate
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P163-PWY
L-methionine degradation I (to L-homocysteine)
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METHIONINE-DEG1-PWY
L-phenylalanine biosynthesis I
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PHESYN
L-phenylalanine biosynthesis II
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PWY-3462
L-phenylalanine biosynthesis III (cytosolic, plants)
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PWY-7432
L-phenylalanine degradation II (anaerobic)
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ANAPHENOXI-PWY
L-phenylalanine degradation III
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PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
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PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
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PWY-8014
L-tryptophan degradation IV (via indole-3-lactate)
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TRPKYNCAT-PWY
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tryptophan degradation VIII (to tryptophol)
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PWY-5081
L-tryptophan degradation XIII (reductive Stickland reaction)
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PWY-8017
L-tyrosine biosynthesis I
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TYRSYN
L-tyrosine biosynthesis II
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PWY-3461
L-tyrosine biosynthesis III
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PWY-6120
L-tyrosine degradation I
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TYRFUMCAT-PWY
L-tyrosine degradation II
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PWY-5151
L-tyrosine degradation III
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PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
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PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
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PWY-8016
long chain fatty acid ester synthesis (engineered)
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PWY-6873
malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
melatonin degradation I
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PWY-6398
methanol oxidation to formaldehyde IV
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PWY-5506
methyl indole-3-acetate interconversion
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PWY-6303
methyl ketone biosynthesis (engineered)
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PWY-7007
methyl tert-butyl ether degradation
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PWY-7779
methylsalicylate degradation
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PWY18C3-24
mevalonate pathway I (eukaryotes and bacteria)
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PWY-922
mevalonate pathway II (haloarchaea)
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PWY-6174
mevalonate pathway III (Thermoplasma)
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PWY-7524
mevalonate pathway IV (archaea)
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PWY-8125
mixed acid fermentation
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FERMENTATION-PWY
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
oleate beta-oxidation
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PWY0-1337
oleate biosynthesis II (animals and fungi)
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PWY-5996
pentachlorophenol degradation
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PCPDEG-PWY
phenylacetate degradation I (aerobic)
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PWY0-321
phenylpropanoid biosynthesis
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PWY-361
phospholipases
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LIPASYN-PWY
phospholipid remodeling (phosphatidylcholine, yeast)
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PWY-7416
phospholipid remodeling (phosphatidylethanolamine, yeast)
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PWY-7409
plasmalogen biosynthesis I (aerobic)
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PWY-7782
plasmalogen degradation
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PWY-7783
platensimycin biosynthesis
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PWY-8179
polyhydroxybutanoate biosynthesis
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PWY1-3
polyhydroxydecanoate biosynthesis
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PWY-6657
propanoate fermentation to 2-methylbutanoate
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PWY-5109
pyruvate fermentation to acetate IV
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PWY-5485
pyruvate fermentation to acetone
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PWY-6588
pyruvate fermentation to butanoate
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CENTFERM-PWY
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to butanol II (engineered)
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PWY-6883
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to hexanol (engineered)
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PWY-6863
pyruvate fermentation to propanoate II (acrylate pathway)
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PWY-5494
reductive monocarboxylic acid cycle
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PWY-5493
retinol biosynthesis
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PWY-6857
rosmarinic acid biosynthesis I
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PWY-5048
S-adenosyl-L-methionine biosynthesis
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SAM-PWY
S-adenosyl-L-methionine salvage I
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PWY-6151
S-adenosyl-L-methionine salvage II
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PWY-5041
S-methyl-5'-thioadenosine degradation I
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PWY-6754
S-methyl-5'-thioadenosine degradation IV
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PWY0-1391
salinosporamide A biosynthesis
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PWY-6627
sitosterol degradation to androstenedione
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PWY-6948
sphingolipid biosynthesis (mammals)
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PWY-7277
sphingomyelin metabolism
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PWY3DJ-11281
sporopollenin precursors biosynthesis
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PWY-6733
starch degradation II
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PWY-6724
starch degradation V
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PWY-6737
stearate biosynthesis I (animals)
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PWY-5972
stearate biosynthesis III (fungi)
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PWY3O-355
suberin monomers biosynthesis
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PWY-1121
succinate fermentation to butanoate
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PWY-5677
sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sucrose biosynthesis II
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PWY-7238
sulfolactate degradation III
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PWY-6638
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of methylsalicylate metabolism
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PWY18C3-25
taurine biosynthesis III
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PWY-8359
TCA cycle VIII (Chlamydia)
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TCA-1
tetrahydromonapterin biosynthesis
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PWY0-1433
thioredoxin pathway
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THIOREDOX-PWY
thymine degradation
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PWY-6430
trehalose biosynthesis IV
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PWY-2622
triacylglycerol degradation
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LIPAS-PWY
uracil degradation I (reductive)
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PWY-3982
valproate beta-oxidation
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PWY-8182
vanillin biosynthesis I
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PWY-5665
wax esters biosynthesis I
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PWY-5884
wax esters biosynthesis II
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PWY-5885
adipate degradation
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PWY-8354
bile acid biosynthesis, neutral pathway
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PWY-6061
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ORGANISM
COMMENTARY 
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Escherichia coli XL1-Blue)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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