Reference on EC 3.1.30.1 - Aspergillus nuclease S1
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Naseem, I.; Hadi, S.M.
Single-strand-specific nuclease of pea seeds: glycoprotein nature and associated nucleotidase activity
Arch. Biochem. Biophys.
255
437-445
1987
Pisum sativum
Stoynov, S.S.; Bakalova, A.T.; Dimov, S.I.; Mitkova, A.V.; Dolapchiev, L.B.
Single-strand-specific DNase activity is an inherent property of the 140-kDa protein of the snake venom exonuclease
FEBS Lett.
409
151-154
1997
Crotalus adamanteus
Ando, T.
A nuclease specific for heat denaturated DNA isolated from a product of Aspergillus oryzae
Biochim. Biophys. Acta
114
158-168
1966
Aspergillus oryzae
Sutton, W.D.
A crude nuclease preparation suitable for use in DNA reassociation experiments
Biochim. Biophys. Acta
240
522-531
1971
Aspergillus oryzae
Vogt, V.M.
Purification and further properties of single-strand-specific nuclease from Aspergillus oryzae
Eur. J. Biochem.
33
192-200
1973
Aspergillus oryzae
Godson, G.N.
Action of the single-stranded DNA specific nuclease S1 on double-stranded DNA
Biochim. Biophys. Acta
308
59-67
1973
Aspergillus oryzae
Shishido, K.; Ando, T.
Action of single-strand-specific S1 endonuclease on locally altered structures in double-stranded DNA
Agric. Biol. Chem.
39
673-681
1975
Aspergillus oryzae
-
Wiegand, R.C.; Godson, G.N.; Radding, C.M.
Specificity of the S1 nuclease from Aspergillus oryzae
J. Biol. Chem.
250
8848-8855
1975
Aspergillus oryzae
Harada, F.; Dahlberg, J.E.
Specific cleavage of tRNA by nuclease S1
Nucleic Acids Res.
2
865-871
1975
Aspergillus oryzae
Zechel, K.; Weber, K.
Degradation of nucleic acids in cell lysates by S1 nuclease in the presence of 9 M urea and sodium dodecylsulfate
Eur. J. Biochem.
77
133-139
1977
Aspergillus oryzae
Vogt, V.M.
Purification and properties of S1 nuclease from Aspergillus
Methods Enzymol.
65
248-255
1980
Aspergillus oryzae
Silber, J.R.; Loeb, L.A.
S1 nuclease does not cleave DNA at single-base mis-matches
Biochim. Biophys. Acta
656
256-264
1981
Aspergillus oryzae, Neurospora crassa
Lehman, R.I.
Endonucleases specific for single-stranded polynucleotides
The Enzymes, 3rd Ed. (Boyer, P. D. , ed. )
4
193-201
1981
Aspergillus oryzae, Neurospora crassa, Vigna radiata var. radiata
-
Oleson, A.E.; Hoganson, E.D.
S1 nuclease of Aspergillus oryzae: characterization of the associated phosphomonoesterase activity
Arch. Biochem. Biophys.
211
478-484
1981
Aspergillus oryzae
Shishido, K.; Ando, T.
Single-strand-specific nucleases
Cold Spring Harbor Monogr. Ser.
14
155-185
1982
Pseudoalteromonas espejiana, Aspergillus oryzae, Bacillus subtilis, Escherichia coli, Homo sapiens, Mus musculus, Mustelus canis, Neurospora crassa, Penicillium citrinum, Vigna radiata var. radiata, Physarum polycephalum, Triticum aestivum, Ustilago maydis, Bacillus subtilis Marburg / DSM 10 / ATCC 6051
-
Shishido, K; Habuka, N.
Purification of S1 nuclease to homogeneity and its chemical, physical and catalytic properties
Biochim. Biophys. Acta
884
215-218
1986
Aspergillus oryzae
Martin, S.A.; Ullrich, R.C.; Meyer, W.L.
A comparative study of nucleases exhibiting preference for single-stranded nucleic acid
Biochim. Biophys. Acta
867
76-80
1986
Aspergillus oryzae, Neurospora crassa, Penicillium citrinum, Vigna radiata var. radiata, Physarum polycephalum, Pisum sativum, Schizophyllum commune, Triticum aestivum, Ustilago maydis
-
Reddy, L.G.; Shankar, V.
Immobilization of single-strand specific nuclease (S1 nuclease) from Aspergillus oryzae
Appl. Biochem. Biotechnol.
14
231-240
1987
Aspergillus oryzae
Oleson, A.E.; Sasakuma, M.
S1 nuclease of Aspergillus oryzae: a glycoprotein with an associated nucleatidase activity
Arch. Biochem. Biophys.
204
361-370
1980
Aspergillus oryzae
Ostrem, J.A.; van Oesbree, T.R.; Marquez, R.; Barstow, L.
Purification of S1 nuclease from Aspergillus oryzae by recycling isoelelctric focusing
Electrophoresis
11
953-957
1990
Aspergillus oryzae
Butour, J.L.; Mazard, A.M.; Vieussens, C.; Johnson, N.P.
Kinetic studies of the hydrolysis of platinum-DNA complexes by nuclease S1
Chem. Biol. Interact.
73
195-205
1990
Aspergillus oryzae
Gite, S.; Shankar, V.
Characterization of S1 nuclease. Involvement of carboxylate groups in metal binding
Eur. J. Biochem.
210
437-441
1992
Aspergillus oryzae
Gite, S.; Reddy, G.; Shankar, V.
Active-site characterization of S1 nuclease I
Biochem. J.
285
489-494
1992
Aspergillus oryzae
Demidov, V.; Frank-Kamenetskii, M.D.; Egholm, M.; Buchardt, O.; Nielson, P.E.
Sequence selective double strand DNA cleavage by peptide nucleic acid (PNA)targeting using nuclease S1
Nucleic Acids Res.
21
2103-2107
1993
Aspergillus oryzae
Gite, S.; Shankar, V.
Preparation, properties and application of Aspergillus oryzae S1 nuclease covalently bound to aminobutyl-Bio-Gel P-2 through its carbohydrate moiety
Biotechnol. Appl. Biochem.
17
373-382
1993
Aspergillus oryzae
Lee, B.R.; Kitamoto, K.; Yamada, O.; Kumagai, C.
Cloning, characterization and overproduction of nuclease S1 gene (nucs) from Aspergillus oryzae
Appl. Microbiol. Biotechnol.
44
425-431
1995
Aspergillus oryzae
Gite, S.; Shankar, V.
S1 nuclease: immunoaffinity purification and evidence for the proximity of cysteine 25 to the substrate binding site
J. Mol. Recognit.
8
281-289
1995
Aspergillus oryzae
Fraser, M.J.
Purification and properties of Neurospora crassa endo-exonuclease, an enzyme which can be converted to a single-strand specific endonuclease
Methods Enzymol.
65
255-263
1980
Neurospora crassa
Tal, J.
The cleavage of transfer RNA by a single strand specific endonuclease from Neurospora crassa
Nucleic Acids Res.
2
1073-1082
1975
Neurospora crassa
Fraser, M.J.; Tjeerde, R.; Matsumoto, K.
A second form of the single-strand specific endonuclease of Neurospora crassa which is associated with a double strand exonuclease
Can. J. Biochem.
54
971-980
1975
Neurospora crassa
Laskowski, M.
Purification and properties of the mung bean nuclease
Methods Enzymol.
65
263-276
1980
Vigna radiata var. radiata
Martin, S.A.; Ullrich, R.C.; Meyer, W.L.
Partial purification and properties of a nuclease from Schizophyllum commune with a preference toward single-stranded nucleic acid
Biochim. Biophys. Acta
867
67-75
1986
Schizophyllum commune
-
Blank, A.; McKeon, T.A.
Single-strand preferring nuclease activity in wheat leaves is increased in senescence and is negatively photoregulated
Proc. Natl. Acad. Sci. USA
86
3169-3173
1989
Triticum aestivum
Otto, B.; Knippers, R.
An endonuclease from mouse cells specific for single-stranded DNA
Eur. J. Biochem.
71
617-622
1976
Mus musculus
Tomkinson, A.E.; Linn, S.
Purification and properties of a single strand-specific endonuclease from mouse cell mitochondria
Nucleic Acids Res.
14
9579-9583
1986
Mus musculus
Wani, A.A.; Hadi, S.M.
Partial purification and properties of an endonuclease from germinating pea seeds specific for single-stranded DNA
Arch. Biochem. Biophys.
196
138-146
1979
Pisum sativum
Waterborg, J.; Kuyper, C.M.A.
Purification of an alkaline nuclease from Physarum polycephalum
Biochim. Biophys. Acta
571
359
1979
Physarum polycephalum
Wani, A.A.; Hart, R.W.
Pisum sativum endonuclease. Studies on substrate specificity and possible use as a biochemical tool
Biochim. Biophys. Acta
655
396-406
1981
Pisum sativum
Wang, E.C.; Furth, J.J.; Rose, J.A.
Purification and characterization of a DNA single strand specific endonuclease from human cells
Biochemistry
17
544-549
1978
Homo sapiens
Cobianchi, F.; Ciarrocchi, G.; Attolini, C.; Falaschi, A.
Properties of the high-molecular-weight deoxyribonuclease of Bacillus subtilis degrading single-stranded DNA
Eur. J. Biochem.
84
533-539
1978
Bacillus subtilis
Przykorska, A.; Szarkowski, J.W.
Single-strand-specific nuclease from the nucleoplasm of rye germ nuclei
Eur. J. Biochem.
108
285-293
1980
Secale cereale
Ikeda, S.; Maeda, N.; Ohshima, T.; Takata, N.
Identification and characterization of a mitochondrial endonuclease from yeast, Schizosaccharomyces pombe
Biochem. Mol. Biol. Int.
40
1017-1024
1996
Schizosaccharomyces pombe
Volbeda, A.; Lahm, A.; Sakiyama, F.; Suck, D.
Crystal structure of Penicillium citrinum P1 nuclease at 2.8 A resolution
EMBO J.
10
1607-1618
1991
Penicillium citrinum
Maekawa, K.; Tsunasawa, S.; Dibo, G.; Sakiyama, F.
Primary structure of nuclease P1 from Penicillium citrinum
Eur. J. Biochem.
200
651-661
1991
Penicillium citrinum
Romier, C.; Dominguez, R.; Lahm, A.; Dahl, O.; Suck, D.
Recognition of single-stranded DNA by nuclease P1: high resolution crystal structures of complexes with substrate analogs
Proteins
32
414-424
1998
Penicillium citrinum
Johnson, E.P.; Mincer, T.; Schwab, H.; Burgin, A.B.; Helinski, D.R.
Plasmid RK2 ParB protein: purification and nuclease properties
J. Bacteriol.
181
6010-6018
1999
Escherichia coli
Guan, C.; Kumar, S.; Kucera, R.; Ewel, A.
Changing the enzymatic activity of T7 endonuclease by mutations at the beta-bridge site: alteration of substrate specificity profile and metal ion requirements by mutation distant from the catalytic domain
Biochemistry
43
4313-4322
2004
Escherichia phage T7
Hosseini, R.; Mulligan, B.J.
Application of rice (Oryza sativa L.) suspension culture in studying senescence in vitro (I). Single strand preferring nuclease activity
Electron. J. Biotechnol.
5
42-54
2002
Oryza sativa
-
Declais, A.C.; Fogg, J.M.; Freeman, A.D.J.; Coste, F.; Hadden, J.M.; Phillips, S.E.V.; Lilley, D.M.J.
The complex between a four-way DNA junction and T7 endonuclease I
EMBO J.
22
1398-1409
2003
Escherichia phage T7
Schneider, O.; Nau, R.; Michel, U.
Comparative analysis of follistatin-, activin beta A- and activin beta B-mRNA steady-state levels in diverse porcine tissues by multiplex S1 nuclease analysis
Eur. J. Endocrinol.
142
537-544
2000
Aspergillus oryzae
Desai, N.A.; Shankar, V.
Single-strand-specific nucleases
FEMS Microbiol. Rev.
26
457-491
2003
Aspergillus oryzae
Desai, N.A.; Shankar, V.
Nuclease Bh1 from Basidiobolus haptosporus: Characterization of the associated-ribonucleotide specific-3'phosphomonoesterase activity
J. Biochem. Mol. Biol. Biophys.
5
267-275
2001
Basidiobolus haptosporus
-
Rangarajan, E.S.; Shankar, V.
Active site characterization of nuclease Rsn from Rhizopus stolonifer: Involvement of histidine in catalysis, tryptophan in substrate binding and carboxylate in metal binding
J. Biochem. Mol. Biol. Biophys.
5
309-325
2001
Rhizopus stolonifer
-
Desai, N.A.; Shankar, V.
Active site characterization of nuclease Bh1 from Basidiobolus haptosporus: involvement of lysine in substrate binding and carboxylate in catalysis
J. Biochem. Mol. Biol. Biophys.
5
327-334
2001
Basidiobolus haptosporus
-
Kar, S.; Soong, L.; Colmenares, M.; Goldsmith-Pestana, K.; McMahon-Pratt, D.
The immunologically protective P-4 antigen of Leishmania amastigotes. A developmentally regulated single strand-specific nuclease associated with the endoplasmic reticulum
J. Biol. Chem.
275
37789-37797
2000
Leishmania pifanoi (Q9NJY3)
Declais, A.C.; Hadden, J.; Phillips, S.E.V.; Lilley, D.M.J.
The active site of the junction-resolving enzyme T7 endonuclease I
J. Mol. Biol.
307
1145-1158
2001
Escherichia phage T7
Freeman, A.D.J.; Declais, A.C.; Lilley, D.M.J.
Metal ion binding in the active site of the junction-resolving enzyme T7 endonuclease I in the presence and in the absence of DNA
J. Mol. Biol.
333
59-73
2003
Escherichia phage T7
Till, B.J.; Burtner, C.; Comai, L.; Henikoff, S.
Mismatch cleavage by single-strand specific nucleases
Nucleic Acids Res.
32
2632-2641
2004
Aspergillus oryzae, Vigna radiata, Apium graveolens (Q9LL59)
Pimkin, M.; Miller, C.G.; Blakesley, L.; Oleykowski, C.A.; Kodali, N.S.; Yeung, A.T.
Characterization of a periplasmic S1-like nuclease coded by the Mesorhizobium loti symbiosis island
Biochem. Biophys. Res. Commun.
343
77-84
2006
Mesorhizobium loti
Liu, J.; Declais, A.C.; Lilley, D.M.J.
Mechanistic aspects of the DNA junction-resolving enzyme T7 endonuclease I
Biochemistry
45
3934-3942
2006
Escherichia phage T7
Maruyama, T.; Shinohara, T.; Ichinose, H.; Kitaoka, M.; Okamura, N.; Kamiya, N.; Goto, M.
Mutation detection in DNA oligonucleotides based on a guanine quenching method coupled with enzymatic digestion of single-stranded DNA
Biotechnol. Lett.
27
1349-1354
2005
Escherichia phage T7
Ren, B.; Zhou, J.M.; Komiyama, M.
Straightforward detection of SNPs in double-stranded DNA by using exonuclease III/nuclease S1/PNA system
Nucleic Acids Res.
32
e42
2004
Aspergillus oryzae
Guan, C.; Kumar, S.
A single catalytic domain of the junction-resolving enzyme T7 endonuclease I is a non-specific nicking endonuclease
Nucleic Acids Res.
33
6225-6234
2005
Escherichia phage T7
Bochkov, D.V.; Khomov, V.V.; Tolstikova, T.G.
Hydrolytic approach for production of deoxyribonucleoside- and ribonucleoside-5 -monophosphates and enzymatic synthesis of their polyphosphates
Biochemistry (Moscow)
71
79-83
2006
Aspergillus oryzae
Tang, Y.; Feng, F.; He, F.; Wang, S.; Li, Y.; Zhu, D.
Direct visualization of enzymatic cleavage and oxidative damage by hydroxyl radicals of single-stranded DNA with a cationic polythiophene derivative
J. Am. Chem. Soc.
128
14972-14976
2006
Aspergillus oryzae
Hong, S.G.
Effective family shuffling method using complementary DNA fragments produced by S1 nuclease
J. Microbiol. Biotechnol.
16
2004-2007
2006
Aspergillus oryzae
-
Sasaki, Y.; Miyoshi, D.; Sugimoto, N.
Regulation of DNA nucleases by molecular crowding
Nucleic Acids Res.
35
4086-4093
2007
Aspergillus oryzae
Balabanova, L.; Gafurov, Y.; Pivkin, M.; Terentyeva, N.; Likhatskaya, G.; Rasskazov, V.
An extracellular S1-type nuclease of marine fungus Penicillium melinii
Mar. Biotechnol.
14
87-95
2012
Penicillium melinii
Wang, L.; Ma, K.; Zhang, Y.
Label-free fluorometric detection of S1 nuclease activity by using polycytosine oligonucleotide-templated silver nanoclusters
Anal. Biochem.
468
34-38
2014
Aspergillus oryzae
Li, X.; Muneoka, S.; Shigi, N.; Sumaoka, J.; Komiyama, M.
Clipping of predetermined fragments from the human genome by S1 nuclease-PNA combinations
Chem. Commun. (Camb. )
50
8674-8676
2014
Aspergillus oryzae
Lesniewicz, K.; Karlowski, W.M.; Pienkowska, J.R.; Krzywkowski, P.; Poreba, E.
The plant S1-like nuclease family has evolved a highly diverse range of catalytic capabilities
Plant Cell Physiol.
54
1064-1078
2013
Arabidopsis thaliana (Q8LDW6)
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