4.1.2.4: deoxyribose-phosphate aldolase

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For detailed information about deoxyribose-phosphate aldolase, go to the full flat file.

Reaction

Synonyms

2-deoxy-D-ribose 5-phosphate aldolase, 2-deoxy-D-ribose-5-phosphate aldolase, 2-deoxyribose 5-phosphate aldolase, 2-Deoxyribose-5-phosphate aldolase, aldolase, deoxyribo, CGI-26, D-2-deoxyribose-5-phosphate aldolase, d5RP aldolase, DeoC, Deoxyriboaldolase, deoxyribose 5-phosphate aldolase, deoxyribose phosphate aldolase-like protein, Deoxyribose-5-phosphate aldolase, deoxyribose-phosphate aldolase, DERA, DPA, DR aldolase, Phosphodeoxyriboaldolase, TgDERA, TgDPA, Tk-DeoC, TK2104, TtDERA

ECTree

     4 Lyases

         4.1 Carbon-carbon lyases

             4.1.2 Aldehyde-lyases

                4.1.2.4 deoxyribose-phosphate aldolase

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28	Activating Compound
32831	AA Sequence
15	Application
1	CAS Registry Number
32	Cloned(Commentary)
7	Crystallization (Commentary)
4	Disease/ Diagnostics
4	Expression
7	General Information
9	General Stability
2	IC50 Value
17	Inhibitors
5	kcat/KM [mM/s]
51	KM Value [mM]
5	Localization
38	Molecular Weight [Da]
17	Natural Substrates/ Products (Substrates)
26	Organic Solvent Stability
222	Organism
6	Pathway
114	PDB ID
26	pH Optimum
8	pH Range
12	pH Stability
1	pI Value
38	Protein Variants
27	Purification (Commentary)
6	Reaction
6	Reaction Type
104	Reference
32	Source Tissue
23	Specific Activity [micromol/min/mg]
5	Storage Stability
179	Substrates and Products (Substrate)
26	Subunits
99	Synonyms
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15	Temperature Optimum [°C]
7	Temperature Range [°C]
20	Temperature Stability [°C]
19	Turnover Number [1/s]

General Stability

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General Stability on EC 4.1.2.4 - deoxyribose-phosphate aldolase

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GENERAL STABILITY

ORGANISM

UNIPROT

LITERATURE

citrate stabilizes below pH 6.5

Bacillus cereus

-

5180

not stable to freezing. Loses all activity when frozen and thawed

Salmonella enterica subsp. enterica serovar Typhimurium

-

5164

stabilization by 0.01 M MgCl2 or sulfhydryl reagents

Homo sapiens

-

5166

the enzyme directly immobilized through ionic exchange interactions on oxidized multiwalled carbon nanotubes is stable with a high tolerance to acetaldehyde, and maintains its activity for several days, being reused for five runs

Escherichia coli

P0A6L0

746574

the enzyme is highly resistant to a high concentration of acetaldehyde and retains about 35% of its initial activity after 5-h exposure to 300 mM acetaldehyde at 25°C

Haloarcula japonica

A0A1Q2T258

749222

the enzyme retains more than 75% activity after exposure for 8 h to 300 mM acetaldehyde at 25°C.

Hyperthermus butylicus

A2BLE9

713699

the enzyme shows stability toward a high concentration of acetaldehyde (100 mM)

Paenibacillus sp.

C7E719

715884

the immobilized enzyme is highly resistant to acetaldehyde. The enzyme immobilized on glutaraldehyde-(3-aminopropyl)triethoxysilane nano-magnet material retains 67.4% of its 2-deoxy-D-ribose-5-phosphate cleavage activity after incubation for 10 h in the presence of 300 mM acetaldehyde at 25°C. No activity is observed for the free enzyme after incubation for 3 h under the same conditions

Escherichia coli

-

748402

the recombinant enzyme is stable in a buffer containing 2 M NaCl

Haloarcula japonica

A0A1Q2T258

749222