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Information on Organism Rhodomicrobium vannielii

Synonyms:
ATCC 17100; DSM 162; LMG 4299; LMG:4299; Rhodomicrobium vannielii Duchow and Douglas 1949; Rhodomicrobium vannielii;
Word Map for Organism Rhodomicrobium vannielii
TaxTree of Organism Rhodomicrobium vannielii
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Alphaproteobacteria can be found in Brenda BRENDA pathways(class)
Hyphomicrobiales can be found in Brenda BRENDA pathways(order)
Hyphomicrobiaceae can be found in Brenda BRENDA pathways(family)
Rhodomicrobium can be found in Brenda BRENDA pathways(genus)
Rhodomicrobium vannielii can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(aminomethyl)phosphonate degradation
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PWY-7805
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
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PWY-7216
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
3-methylbutanol biosynthesis (engineered)
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PWY-6871
4-oxopentanoate degradation
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PWY-7948
acetaldehyde biosynthesis I
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PWY-6333
acetone degradation II (to acetoacetate)
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PWY-5533
acetyl-CoA fermentation to butanoate
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PWY-5676
acetylene degradation (anaerobic)
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P161-PWY
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
alanine metabolism
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alpha-Linolenic acid metabolism
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Amino sugar and nucleotide sugar metabolism
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anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Biosynthesis of secondary metabolites
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butanoate fermentation
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Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
Calvin-Benson-Bassham cycle
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CALVIN-PWY
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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Chloroalkane and chloroalkene degradation
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chlorophyll metabolism
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Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation in Crenarchaeota
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Cysteine and methionine metabolism
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cysteine metabolism
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cytosolic NADPH production (yeast)
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PWY-7268
Drug metabolism - cytochrome P450
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dZTP biosynthesis
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PWY-8289
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol fermentation
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ethanolamine utilization
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PWY0-1477
ethene biosynthesis V (engineered)
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PWY-7124
ethylmalonyl-CoA pathway
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PWY-5741
Fatty acid degradation
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Fe(II) oxidation
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PWY-6692
formaldehyde assimilation I (serine pathway)
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PWY-1622
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis III
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PWY66-399
glucosylglycerol biosynthesis
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PWY-7902
Glutathione metabolism
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Glycine, serine and threonine metabolism
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glycogen biosynthesis I (from ADP-D-Glucose)
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GLYCOGENSYNTH-PWY
glycogen metabolism
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Glycolysis / Gluconeogenesis
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Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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GLYOXYLATE-BYPASS
glyphosate degradation III
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PWY-7807
heterolactic fermentation
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P122-PWY
incomplete reductive TCA cycle
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P42-PWY
L-cysteine biosynthesis I
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CYSTSYN-PWY
L-isoleucine degradation II
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PWY-5078
L-leucine degradation III
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PWY-5076
L-methionine degradation III
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PWY-5082
L-phenylalanine degradation III
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PWY-5079
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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PWY-5057
leucine metabolism
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lipid metabolism
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malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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methionine metabolism
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methylaspartate cycle
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
Naphthalene degradation
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Nicotinate and nicotinamide metabolism
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nitrate assimilation
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nitrogen fixation I (ferredoxin)
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N2FIX-PWY
Nitrogen metabolism
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nitrogen remobilization from senescing leaves
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PWY-6549
non-pathway related
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noradrenaline and adrenaline degradation
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PWY-6342
nucleoside and nucleotide degradation (archaea)
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PWY-5532
Oxidative phosphorylation
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oxidative phosphorylation
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Pantothenate and CoA biosynthesis
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partial TCA cycle (obligate autotrophs)
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PWY-5913
phenylalanine metabolism
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phenylethanol biosynthesis
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PWY-5751
photosynthesis
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phytol degradation
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PWY66-389
polyhydroxybutanoate biosynthesis
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PWY1-3
Porphyrin and chlorophyll metabolism
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propanol degradation
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Purine metabolism
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purine metabolism
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pyrimidine deoxyribonucleotides de novo biosynthesis I
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PWY-7184
pyrimidine deoxyribonucleotides de novo biosynthesis II
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PWY-7187
pyrimidine deoxyribonucleotides de novo biosynthesis III
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PWY-6545
pyrimidine deoxyribonucleotides dephosphorylation
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PWY-7206
Pyrimidine metabolism
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pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
Retinol metabolism
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Riboflavin metabolism
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Rubisco shunt
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PWY-5723
salidroside biosynthesis
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PWY-6802
seleno-amino acid biosynthesis (plants)
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PWY-6936
serotonin degradation
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PWY-6313
serotonin metabolism
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Starch and sucrose metabolism
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starch biosynthesis
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PWY-622
Steroid biosynthesis
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sterol:steryl ester interconversion (yeast)
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PWY-7424
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
sulfate reduction
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sulfide oxidation IV (mitochondria)
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PWY-7927
sulfite oxidation IV (sulfite oxidase)
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PWY-5326
Sulfur metabolism
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superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
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PWY0-166
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
TCA cycle VIII (Chlamydia)
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TCA-1
thiosulfate oxidation I (to tetrathionate)
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THIOSULFOX-PWY
tunicamycin biosynthesis
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PWY-7821
Tyrosine metabolism
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tyrosine metabolism
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Ubiquinone and other terpenoid-quinone biosynthesis
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valine metabolism
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vitamin K-epoxide cycle
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Rhodomicrobium vannielii)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA