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Information on Organism Thermococcus profundus

Synonyms:
ATCC 51592; CIP 105121; DSM 9503; JCM 9378; strain DT 5432; strain DT5432; Thermococcus profundus Kobayashi et al. 1995; Thermococcus profundus; Thermus profundus (sic) Kobayashi et al. 1995; Thermus profundus;
Word Map for Organism Thermococcus profundus
TaxTree of Organism Thermococcus profundus
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cellular organisms
Archaea can be found in Brenda BRENDA pathways(superkingdom)
Euryarchaeota can be found in Brenda BRENDA pathways(phylum)
Thermococci can be found in Brenda BRENDA pathways(class)
Thermococcales can be found in Brenda BRENDA pathways(order)
Thermococcaceae can be found in Brenda BRENDA pathways(family)
Thermococcus can be found in Brenda BRENDA pathways(genus)
Thermococcus profundus can be found in Brenda BRENDA pathways(species)
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EC NUMBER
COMMENTARY hide
preliminary BRENDA-supplied EC number
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(5R)-carbapenem carboxylate biosynthesis
2-oxobutanoate degradation II
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-
2OXOBUTYRATECAT-PWY
4-aminobutanoate degradation V
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-
PWY-5022
acetate fermentation
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-
aerobic respiration I (cytochrome c)
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-
PWY-3781
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alanine metabolism
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Alanine, aspartate and glutamate metabolism
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-
ammonia assimilation cycle I
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-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
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-
AMMASSIM-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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-
PWY-7383
Arginine and proline metabolism
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-
Arginine biosynthesis
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-
Biosynthesis of secondary metabolites
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Butanoate metabolism
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
Carbon fixation in photosynthetic organisms
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-
Carbon fixation pathways in prokaryotes
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Citrate cycle (TCA cycle)
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Entner-Doudoroff pathway II (non-phosphorylative)
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-
NPGLUCAT-PWY
ethene biosynthesis IV (engineered)
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-
PWY-7126
Fe(II) oxidation
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-
PWY-6692
GABA shunt I
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-
GLUDEG-I-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
glutamate and glutamine metabolism
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-
glycogen metabolism
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Glycolysis / Gluconeogenesis
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Glyoxylate and dicarboxylate metabolism
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-
incomplete reductive TCA cycle
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-
P42-PWY
isoleucine metabolism
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-
isopropanol biosynthesis (engineered)
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-
PWY-6876
L-alanine biosynthesis II
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ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation III
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ALANINE-DEG3-PWY
L-alanine degradation IV
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PWY1-2
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-aspartate degradation II (aerobic)
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PWY-8291
L-aspartate degradation III (anaerobic)
-
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PWY-8294
L-citrulline biosynthesis
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CITRULBIO-PWY
L-glutamate biosynthesis II
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GLUTAMATE-SYN2-PWY
L-glutamate biosynthesis III
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GLUTSYNIII-PWY
L-glutamate degradation I
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GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation VII (to butanoate)
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GLUDEG-II-PWY
L-glutamate degradation X
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PWY-5766
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-glutamine biosynthesis I
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GLNSYN-PWY
L-isoleucine biosynthesis IV
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PWY-5104
L-isoleucine biosynthesis V
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-
PWY-5108
L-isoleucine degradation III (oxidative Stickland reaction)
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-
PWY-8184
L-leucine degradation V (oxidative Stickland reaction)
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-
PWY-8185
L-Ndelta-acetylornithine biosynthesis
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PWY-6922
L-ornithine biosynthesis II
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ARGININE-SYN4-PWY
L-proline degradation I
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PROUT-PWY
L-valine degradation III (oxidative Stickland reaction)
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PWY-8183
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
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PWY-8377
leucine metabolism
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Metabolic pathways
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-
Methane metabolism
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methylaspartate cycle
Microbial metabolism in diverse environments
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-
NAD(P)/NADPH interconversion
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-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
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PWY0-1335
Nitrogen metabolism
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Nitrotoluene degradation
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non-pathway related
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Oxidative phosphorylation
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oxidative phosphorylation
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phenylalanine metabolism
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proline metabolism
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proline to cytochrome bo oxidase electron transfer
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PWY0-1544
Propanoate metabolism
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purine metabolism
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purine nucleobases degradation II (anaerobic)
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PWY-5497
pyruvate decarboxylation to acetyl CoA III
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PWY-8275
pyruvate fermentation to acetate I
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P142-PWY
pyruvate fermentation to acetate III
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-
PWY-5483
pyruvate fermentation to acetate VI
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PWY-5538
pyruvate fermentation to acetate VII
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-
PWY-5600
pyruvate fermentation to acetone
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-
PWY-6588
pyruvate fermentation to butanoate
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CENTFERM-PWY
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to ethanol III
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-
PWY-6587
pyruvate fermentation to hexanol (engineered)
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PWY-6863
Pyruvate metabolism
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-
reductive glycine pathway of autotrophic CO2 fixation
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-
PWY-8303
reductive monocarboxylic acid cycle
-
-
PWY-5493
reductive TCA cycle I
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-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
Starch and sucrose metabolism
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-
starch degradation
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-
Taurine and hypotaurine metabolism
-
-
tryptophan metabolism
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-
Valine, leucine and isoleucine degradation
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-
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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LINKS TO OTHER DATABASES (specific for Thermococcus profundus)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA