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Information on EC 3.2.1.4 - cellulase and Organism(s) Acetivibrio thermocellus and UniProt Accession P10477

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EC Tree
     3 Hydrolases
         3.2 Glycosylases
             3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
                3.2.1.4 cellulase
IUBMB Comments
Will also hydrolyse 1,4-linkages in beta-D-glucans also containing 1,3-linkages.
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This record set is specific for:
Acetivibrio thermocellus
UNIPROT: P10477
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Word Map
The taxonomic range for the selected organisms is: Acetivibrio thermocellus
The enzyme appears in selected viruses and cellular organisms
Reaction Schemes
Synonyms
cellulase, cel7a, cellobiohydrolase i, cel5a, cel6a, avicelase, endocellulase, celluclast, cel7b, cbhii, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
9.5 cellulase
-
-
-
-
Abscission cellulase
-
-
-
-
alkali cellulase
-
-
-
-
Alkaline cellulase
-
-
-
-
avicelase
-
-
-
-
beta-1,4-endoglucan hydrolase
-
-
-
-
beta-1,4-endoglucanase
-
-
beta-1,4-glucanase
-
-
-
-
Carboxymethyl cellulase
-
-
-
-
Carboxymethyl-cellulase
-
-
-
-
carboxymethylcellulase
-
-
-
-
CEL1
-
-
-
-
cellobiohydrolase
-
-
-
-
celluase A
-
-
-
-
celludextrinase
-
-
-
-
Cellulase
-
-
-
-
cellulase A 3
-
-
-
-
cellulase CelE
-
-
Cellulase E1
-
-
-
-
Cellulase E2
-
-
-
-
Cellulase E4
-
-
-
-
Cellulase E5
-
-
-
-
Cellulase SS
-
-
-
-
Cellulase V1
-
-
-
-
cellulosin AP
-
-
-
-
CMCase
-
-
-
-
ctCel9D-Cel44A
-
bifunctional multimodular cellulase
CX-cellulase
-
-
-
-
Dockerin type 1
UniProt
EG1
-
-
-
-
EG2
-
-
-
-
EG3
-
-
-
-
EGA
-
-
-
-
EGB
-
-
-
-
EGC
-
-
-
-
EGCCA
-
-
-
-
EGCCC
-
-
-
-
EGCCD
-
-
-
-
EGCCF
-
-
-
-
EGCCG
-
-
-
-
EGD
-
-
-
-
EGE
-
-
-
-
EGF
-
-
-
-
EGH
-
-
-
-
EGI
-
-
-
-
EGIV
-
-
-
-
EGM
-
-
-
-
EGSS
-
-
-
-
EGX
-
-
-
-
EGY
-
-
-
-
EGZ
-
-
-
-
endo-1,4-beta-D-glucanase
-
-
-
-
endo-1,4-beta-glucanase
-
-
-
-
endo-1,4-beta-glucanase E1
-
-
-
-
endo-1,4-beta-glucanase V1
-
-
-
-
endocellulase E1
-
-
-
-
endoglucanase
endoglucanase D
-
-
-
-
FI-CMCASE
-
-
-
-
GH124 endoglucanase
-
pancellase SS
-
-
-
-
Thermoactive cellulase
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of O-glycosyl bond
-
-
-
-
PATHWAY SOURCE
PATHWAYS
-
-
SYSTEMATIC NAME
IUBMB Comments
4-beta-D-glucan 4-glucanohydrolase
Will also hydrolyse 1,4-linkages in beta-D-glucans also containing 1,3-linkages.
CAS REGISTRY NUMBER
COMMENTARY hide
9012-54-8
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
acid-swollen cellulose + H2O
?
show the reaction diagram
-
-
-
-
?
avicel + H2O
?
show the reaction diagram
barley 1,3-1,4-beta glucan + H2O
?
show the reaction diagram
-
-
-
-
?
barley beta-glucan + H2O
?
show the reaction diagram
-
-
-
-
?
beta-glucan + H2O
?
show the reaction diagram
-
-
-
-
?
carboxymethyl cellulose + H2O
cellobiose + cellooligosaccharides
show the reaction diagram
-
-
-
-
?
carboxymethylcellulose + H2O
?
show the reaction diagram
cellohexaitol + H2O
?
show the reaction diagram
-
-
-
-
?
cellohexaose + H2O
?
show the reaction diagram
-
-
-
-
?
cellopentaose + H2O
?
show the reaction diagram
-
-
-
-
?
cellotetraose + H2O
2 cellobiose
show the reaction diagram
cellotriose + H2O
D-glucose + cellobiose
show the reaction diagram
cellulose + H2O
?
show the reaction diagram
lichenan + H2O
?
show the reaction diagram
xylan + H2O
?
show the reaction diagram
-
the smallest product is a disaccharide
-
-
?
carboxymethylcellulose + H2O
additional information
-
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mn2+
enzyme binding structure, overview
Na+
-
activates the truncated enzyme mutant CtLic26A-Cel5 about 2fold
Ni2+
-
activates the truncated enzyme mutant CtLic26A-Cel5 about 2fold
additional information
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
cellobiose
lactose
-
51000 Da subunit from the multicomponent cellulase complexes
Tris
Tris almost completely suppresses CtCel9Q hydrolase activity, a Tris molecule is bound to three catalytic residues of CtCel9Q and occupies subsite -1 of the CtCel9Q active-site cleft, enzyme mutant crystal structure analysis, overview
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
additional information
-
Michaelis-Menten kinetics, overview
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.045 - 0.135
beta-Glucan
0.006 - 0.115
carboxymethyl cellulose
-
0.053 - 0.145
lichenan
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
315
-
recombinant enzyme from cytoplasmic supernatant of Escherichia coli
40
-
enzyme mutant F194A, pH 5.5, 50°C
428
-
recombinant enzyme from granules produced by Escherichia coli
65.1
-
endoglucanase I
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4.2
-
wild-type CtGH5
4.3
-
truncated enzyme mutant CtLic26A-Cel5
5.5
-
mutant CtGH5 F194A
5.5 - 6.5
-
enzyme form EGA
6.5
-
deletion variants CelEM1, CelEM2 and CelEM3
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
3 - 8
-
pH profile
4 - 7.5
over 50% of maximal activity within this range, profile overview
4.8 - 8.2
-
more than 50% of maximal activity at pH 4.8 and at pH 8.2
5 - 7.7
-
pH 5.0: about 65% of maximal activity, pH 7.7. about 65% of maximal activity, deletion variants CelEM1, CelEM2 and CelEM3
5 - 8
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
70
-
deletion variants CelEM1, CelEM2 and CelEM3
75
-
enzyme form EGA
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
35 - 75
over 50% of maximal activity within this range, profile overview
40 - 90
-
temperature profile
50 - 80
-
50°C: about 40% of maximal activity, 80°C: about 30% of maximal activity, deletion variants CelEM1, CelEM2 and CelEM3
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
evolution
-
the enzyme belongs to the glycoside hydrolase family 5,GH5
additional information
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
100000
-
endoglucanase 2, gel filtration
110000
-
endoglucanase 2, non-denaturing PAGE
40000
-
x * 40000, enzyme form EGB, SDS-PAGE
56000
-
x * 56000, enzyme form EGA, SDS-PAGE
60000
-
endoglucanase 1b, non-denaturing PAGE
64000
65000
66000
-
x * 66000, enzyme form EGB, SDS-PAGE
76000
-
x * 76000, SDS-PAGE
83000
-
endoglucanase I, equilibrium sedimentation
94000
-
endoglucanase I, non-denaturing PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
monomer
-
1 * 65000, SDS-PAGE
additional information
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
glycoprotein
no modification
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
crystals of recombinant native enzyme diffract to 2.1 A, crystals of seleno-L-methionine-containing protein diffract to 2.8 A, hanging-drop vapour-diffusion method, crystals belong to space group P4(3)2(1)2
-
hanging drop vapor diffusion method at 20°C, crystal structure of Cel44A is solved at a resolution of 0.96 A.The crystal structures of E186Q mutant complexed with cellopentaose and cellohexaose are solved at 2.0 and 1.8 A resolution, respectively
-
purified recombinant C-terminally truncated mutant enzyme CtCel9QDELTAc complexed with Tris, Tris + cellobiose, cellobiose + cellotriose, cellotriose, and cellotetraose, sitting drop vapor diffusion method, a drop consists of 0.0013 ml of protein solution and 0.0013 ml of reservoir solution containing 9-12% w/v PEG 3350, 15-20% v/v PEG 550MME, 30 mM NaBr, 30 mM NaF, and 30 mM NaI, and 0.1 M Tris, pH 8.5, with or without 10 mM cellooligosaccharides, equilibration against 0.2 ml reservoir solution, 22°C, X-ray diffraction structure determination analysis at resolutions 1.50, 1.70, 2.05, 2.05, and 1.75 A, respectively. In both the oligosaccharide-free and cellobiose-bound CtCel9QDELTAc structures, a Tris molecule is observed in the active site
purified recombinant detagged enzyme in complex with G3 or G5f, sitting drop vapour diffuson method, mixing of 0.027 ml of 40 mg/ml protein in 20 mM Tris, pH 7.5, and 6.7 mM G3 or G5f, with 0.027 ml of reservoir solution containing 12% Tacsimate, pH 5.0, 18% or 20% PEG 3350, 2 mM manganese(II) acetate, respectively, and equilibration against 0.4 ml of reservoir solution, 20°C, 3 days, X-ray diffraction structure determination and analysis at 1.04 and 0.99 A resolution, respectively, modelling
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
D79A
site-directed mutagenesis
E186Q
-
mutant has no cellulase activity
E359Q
-
mutant has no cellulase activity
E435A
site-directed mutagenesis
F194A
-
site-directed mutagenesis, the mutant shows 2fold increased activity compared to wild-type enzyme
additional information
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
50
-
purified recombinant mutant CtLic26A-Cel5, maximally stable
68
-
melting temperature of mutant enzyme CtGH5-F194A
70
-
denaturation above
75
-
about 20% loss of activity after 30 min, about 50% loss of activity after 2 h, 51000 Da subunit from the multicomponent cellulase complexes
79
-
melting temperature of wild-type enzyme CtGH5
80
-
15 min, 10% loss of activity
additional information
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
MgCl2 slightly enhances thermal stability
-
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-20°C, stable for at least 6 months
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
endoglucanase I
-
recombinant His-tagged enzyme from Escherichia coli strain BL21(DE3)pLysS, cleavage of the His-tag by 3C protease
recombinant His6-tagged truncated mutant cellulase CtLic26A-Cel5 from Escherichia coli strain BL21 by metal affinity chromatography
-
the enzyme is the 51000 Da subunit from the multicomponent cellulase complexes
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression in Escherichia coli
-
expression of His6-tagged wild-type and truncated mutant cellulase in Escherichia coli strain BL21
-
gene celQ, sequence comparisons, recombinant expression of truncated and point mutant enzymes in Escherichia coli strain BL21(DE3)
overproduction in Escherichia coli
-
recombinant expression of His-tagged enzyme in Escherichia coli strain BL21(DE3)pLysS
recombinant expression of soluble enzyme chimeric mutant CtGH1-L1-CtGH5-F194A in Escherichia coli strain BL21
-
wild-type enzyme and mutant enzymes E186Q and E359Q, expression in Escherichia coli
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
degradation
cellulase complex containing cellulolytic enzymes,endoglucanase CelE, EC 3.2.1.4, and beta-glucosidase BglA, EC 3.2.1.21, to completely degrade cellulose to glucose. The cellulases are displayed on the cell surface of Corynebacterium glutamicum by using themechanosensitive channel to anchor enzymes in the cytoplasmic membrane. The displayed cellulases complexes have a synergic effect on the direct conversion of biomass to reducing sugars leading to 3.1- to 6.0fold increase compared to the conversion by the secreted cellulases complexes. The displayed cellulases complexes increase the residual activities of cCelEand cBglA at 70°C from 28.3% and 24.3% in the secreted form to 65.1% and 82.8%, respectively
degradation
-
replacement of carbohydrate-binding module by modules from enzymes with different specificities leads to enhanced activity that is affected by carbohydrate-binding module binding specificity, e.g. on ball-milled cellulose or avicel. The chimeric enzymes can efficiently degrade milled lignocellulosic materials, such as corn hulls
food industry
-
the capacity of Cel8A to cleave 1,3-1,4-beta-glucans is significantly affected by the presence of the barley-based feed for broilers. Exogenous 1,3-1,4-beta-glucanases (EC 3.2.1.73) but not 1,4-beta-glucanases are obligatory enzymes to improve the nutritive value of barley-based diets for broilers. Enzyme is completely resistant to proteolytic inactivation after a 30 min incubation with pancreatic proteases
synthesis
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Mori, Y.
Purification and characterization of an endoglucanase from the cellulosomes (multicomponent cellulase complexes) of Clostridium thermocellum
Biosci. Biotechnol. Biochem.
56
1198-1203
1992
Acetivibrio thermocellus
Manually annotated by BRENDA team
Halliwell, G.; Halliwell, N.
Cellulolytic enzyme components of the cellulase complex of Clostridium thermocellum
Biochim. Biophys. Acta
992
223-229
1989
Acetivibrio thermocellus
-
Manually annotated by BRENDA team
Robson, L.M.; Chambliss, G.H.
Cellulases of bacterial origin
Enzyme Microb. Technol.
11
626-644
1989
Acetivibrio cellulolyticus, Bacillus subtilis, Bacillus sp. (in: Bacteria), Cellulomonas fimi, Acetivibrio thermocellus, Dickeya chrysanthemi, Ruminococcus albus, Thermobifida fusca, Thermomonospora curvata, Bacillus sp. (in: Bacteria) No. 1139, Bacillus sp. (in: Bacteria) N-4, Ruminococcus albus F40
-
Manually annotated by BRENDA team
Beguin, P.; Joliff, G.; Juy, M.; Amit, A.G.; Millet, J.; Poljak, R.J.; Aubert, J.P.
Crystalline endoglucanase D from Clostridium thermocellum overproduced in Escherichia coli
Methods Enzymol.
160
355-362
1988
Acetivibrio thermocellus
-
Manually annotated by BRENDA team
Ng, T.K.; Zeikus, J.G.
Endoglucanase from Clostridium thermocellum
Methods Enzymol.
160
351-355
1988
Acetivibrio thermocellus
-
Manually annotated by BRENDA team
Joliff, G.; Beguin, P.; Juy, M.; Millet, J.; Ryter, A.; Poljak, R.; Aubert, J.P.
Isolation, crystallization and properties of a new cellulase of Clostridium thermocellum overproduced in Escherichia coli
Bio/Technology
4
896-900
1986
Acetivibrio thermocellus
-
Manually annotated by BRENDA team
Romaniec, M.P.M.; Fauth, U.; Kobayashi, T.; Huskisson, N.S.; Barker, P.J.; Demain, A.L.
Purification and characterization of a new endoglucanase from Clostridium thermocellum
Biochem. J.
283
69-73
1992
Acetivibrio thermocellus
-
Manually annotated by BRENDA team
Abdeev, R.M.; Goldenkova, I.V.; Musiychuk, K.A.; Piruzian, E.S.
Exploring the properties of thermostable Clostridium thermocellum cellulase CelE for the purpose of its expression in plants
Biochemistry
66
808-813
2001
Acetivibrio thermocellus
Manually annotated by BRENDA team
Arai, T.; Araki, R.; Tanaka, A.; Karita, S.; Kimura, T.; Sakka, K.; Ohmiya, K.
Characterization of a cellulase containing a family 30 carbohydrate-binding module (CBM) derived from Clostridium thermocellum CelJ: importance of the CBM to cellulose hydrolysis
J. Bacteriol.
185
504-512
2003
Acetivibrio thermocellus, Acetivibrio thermocellus CelJ
Manually annotated by BRENDA team
Najmudin, S.; Guerreiro, C.I.; Ferreira, L.M.; Romao, M.J.; Fontes, C.M.; Prates, J.A.
Overexpression, purification and crystallization of the two C-terminal domains of the bifunctional cellulase ctCel9D-Cel44A from Clostridium thermocellum
Acta Crystallogr. Sect. F
61
1043-1045
2005
Acetivibrio thermocellus
Manually annotated by BRENDA team
Kitago, Y.; Karita, S.; Watanabe, N.; Kamiya, M.; Aizawa, T.; Sakka, K.; Tanaka, I.
Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum
J. Biol. Chem.
282
35703-35711
2007
Acetivibrio thermocellus
Manually annotated by BRENDA team
Ahmed, S.; Deka, D.; Jawed, M.; Goyal, D.; Fontes, C.; Goyal, A.
Biochemical characterization of a recombinant derivative (CtLic26A-Cel5) of a cellulosomal cellulase from Clostridium thermocellum
Curr. Trends Biotechnol. Pharm.
3
56-63
2009
Acetivibrio thermocellus
-
Manually annotated by BRENDA team
Kim, S.J.; Hyeon, J.E.; Jeon, S.D.; Choi, G.W.; Han, S.O.
Bi-functional cellulases complexes displayed on the cell surface of Corynebacterium glutamicum increase hydrolysis of lignocelluloses at elevated temperature
Enzyme Microb. Technol.
66
67-73
2014
Acetivibrio thermocellus (P10477), Acetivibrio thermocellus DSM 1237 (P10477)
Manually annotated by BRENDA team
Lan Thanh Bien, T.; Tsuji, S.; Tanaka, K.; Takenaka, S.; Yoshida, K.
Secretion of heterologous thermostable cellulases in Bacillus subtilis
J. Gen. Appl. Microbiol.
60
175-182
2014
Acetivibrio thermocellus (A3DC29), Acetivibrio thermocellus (P04956), Acetivibrio thermocellus DSM 1237 (A3DC29), Acetivibrio thermocellus DSM 1237 (P04956)
Manually annotated by BRENDA team
Fernandes, V.; Costa, M.; Ribeiro, T.; Serrano, L.; Cardoso, V.; Santos, H.; Lordelo, M.; Ferreira, L.; Fontes, C.
1,3-1,4-beta-Glucanases and not 1,4-beta-glucanases improve the nutritive value of barley-based diets for broilers
Anim. Feed Sci. Technol.
211
153-163
2016
Acetivibrio thermocellus
-
Manually annotated by BRENDA team
Haq, I.U.; Akram, F.
Enhanced production of a recombinant multidomain thermostable GH9 processive endo-1,4-beta-glucanase (CenC) from Ruminiclostridium thermocellum in a mesophilic host through various cultivation and induction strategies
Appl. Biochem. Biotechnol.
183
171-188
2017
Acetivibrio thermocellus, Acetivibrio thermocellus ATCC 27405
Manually annotated by BRENDA team
Ichikawa, S.; Yoshida, M.; Karita, S.; Kondo, M.; Goto, M.
Carbohydrate-binding modules influence substrate specificity of an endoglucanase from Clostridium thermocellum
Biosci. Biotechnol. Biochem.
80
188-192
2016
Acetivibrio thermocellus, Acetivibrio thermocellus 132
Manually annotated by BRENDA team
Urresti, S.; Cartmell, A.; Liu, F.; Walton, P.H.; Davies, G.J.
Structural studies of the unusual metal-ion site of the GH124 endoglucanase from Ruminiclostridium thermocellum
Acta Crystallogr. Sect. F
74
496-505
2018
Acetivibrio thermocellus (A3DCJ4), Acetivibrio thermocellus, Acetivibrio thermocellus DSM 1237 (A3DCJ4), Acetivibrio thermocellus NBRC 103400 (A3DCJ4), Acetivibrio thermocellus ATCC 27405 (A3DCJ4), Acetivibrio thermocellus VPI 7372 (A3DCJ4), Acetivibrio thermocellus NCIMB 10682 (A3DCJ4), Acetivibrio thermocellus NRRL B-4536 (A3DCJ4)
Manually annotated by BRENDA team
Nath, P.; Dhillon, A.; Kumar, K.; Sharma, K.; Jamaldheen, S.B.; Moholkar, V.S.; Goyal, A.
Development of bi-functional chimeric enzyme (CtGH1-L1-CtGH5-F194A) from endoglucanase (CtGH5) mutant F194A and ?-1,4-glucosidase (CtGH1) from Clostridium thermocellum with enhanced activity and structural integrity
Biores. Technol.
282
494-501
2019
Acetivibrio thermocellus
Manually annotated by BRENDA team
Jeng, W.Y.; Liu, C.I.; Lu, T.J.; Lin, H.J.; Wang, N.C.; Wang, A.H.
Crystal structures of the C-terminally truncated endoglucanase Cel9Q from Clostridium thermocellum complexed with cellodextrins and Tris
ChemBioChem
20
295-307
2019
Acetivibrio thermocellus (Q9AJF8), Acetivibrio thermocellus
Manually annotated by BRENDA team