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Information on EC 2.5.1.122 - 4-O-dimethylallyl-L-tyrosine synthase and Organism(s) Leptosphaeria maculans and UniProt Accession Q6Q874

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IUBMB Comments
The enzyme is involved in biosynthesis of the phytotoxin sirodesmin PL by the phytopathogenic ascomycete Leptosphaeria maculans.
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This record set is specific for:
Leptosphaeria maculans
UNIPROT: Q6Q874
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Word Map
The taxonomic range for the selected organisms is: Leptosphaeria maculans
The enzyme appears in selected viruses and cellular organisms
Synonyms
tyrpt, tyrosine o-prenyltransferase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
tyrosine O-prenyltransferase
-
tyrosine-O-prenyltransferase
-
tyrosine O-prenyltransferase
-
-
SYSTEMATIC NAME
IUBMB Comments
dimethylallyl diphosphate:L-tyrosine 4-O-dimethylallyltransferase
The enzyme is involved in biosynthesis of the phytotoxin sirodesmin PL by the phytopathogenic ascomycete Leptosphaeria maculans.
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
(2E)-2-methylpenta-2,4-dien-1-yl diphosphate + L-tyrosine
O-[(2E)-2-methylpenta-2,4-dien-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2E)-3-(2-methoxyphenyl)prop-2-en-1-yl trihydrogen diphosphate + L-tyrosine
O-[(2E)-3-(2-methoxyphenyl)prop-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2E)-3-methylpent-2-en-1-yl diphosphate + L-tyrosine
O-[(2E)-3-methylpent-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2E)-3-phenylbut-2-en-1-yl diphosphate + L-tyrosine
O-[(2E)-3-phenylbut-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2E)-3-phenylprop-2-en-1-yl diphosphate + L-tyrosine
O-[(2E)-3-phenylprop-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2E)-5-methylhexa-2,4-dien-1-yl diphosphate + L-tyrosine
O-[(2E)-5-methylhexa-2,4-dien-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2E)-but-2-en-1-yl diphosphate + L-tyrosine
O-[(2E)-but-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2E)-penta-2,4-dien-1-yl diphosphate + L-tyrosine
O-[(2E)-penta-2,4-dien-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2E,4E)-2-methylhexa-2,4-dien-1-yl diphosphate + L-tyrosine
O-[(2E,4E)-2-methylhexa-2,4-dien-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2E,4E)-5-phenylpenta-2,4-dien-1-yl diphosphate + L-tyrosine
O-[(2E,4E)-5-phenylpenta-2,4-dien-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
(2Z)-3-chlorobut-2-en-1-yl diphosphate + L-tyrosine
O-[(2Z)-3-chlorobut-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
2-cyclohexylideneethyl diphosphate + L-tyrosine
O-[2-cyclohexylideneethyl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
2-methylprop-2-en-1-yl diphosphate + L-tyrosine
O-[2-methylprop-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
2-oxopropyl diphosphate + L-tyrosine
O-[2-oxopropyl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
2-pentenyl diphosphate + 3-fluoro-DL-tyrosine
diphosphate + 3-fluoro-4-O-(2-pentenyl)-DL-tyrosine
show the reaction diagram
-
20.5% conversion
-
?
2-pentenyl diphosphate + 4-amino-L-phenylalanine
diphosphate + 4-(2-pentenylamino)-L-phenylalanine
show the reaction diagram
-
42.6% conversion
-
?
2-pentenyl diphosphate + alpha-methyl-L-tyrosine
diphosphate + alpha-methyl-4-O-(2-pentenyl)-L-tyrosine
show the reaction diagram
-
33.5% conversion
-
?
2-pentenyl diphosphate + L-tyrosine
diphosphate + 4-O-(2-pentenyl)-L-tyrosine
show the reaction diagram
-
44.3% conversion
-
?
3,3-diphenylprop-2-en-1-yl diphosphate + L-tyrosine
O-[3,3-diphenylprop-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
3-ethylpent-2-en-1-yl diphosphate + L-tyrosine
O-[3-ethylpent-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
benzyl diphosphate + 4-amino-L-phenylalanine
diphosphate + 4-(benzylamino)-L-phenylalanine
show the reaction diagram
-
54.6% conversion
-
?
cyanomethyl diphosphate + L-tyrosine
O-[cyanomethyl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
cyclohex-1-en-1-ylmethyl diphosphate + L-tyrosine
O-[cyclohex-1-en-1-ylmethyl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
dimethylallyl diphosphate + 3,4-dihydroxy-L-phenylalanine
diphosphate + 3-hydroxy-4-dimethylallyloxy-L-phenylalanine
show the reaction diagram
-
88.2% conversion
-
?
dimethylallyl diphosphate + 3,5-dibromo-4-hydroxy-L-phenylalanine
diphosphate + 3,5-dibromo-4-dimethylallyloxy-L-phenylalanine
show the reaction diagram
-
53.3% conversion
-
?
dimethylallyl diphosphate + 3-fluoro-DL-tyrosine
diphosphate + 3-fluoro-4-O-dimethylallyl-DL-tyrosine
show the reaction diagram
-
66.5% conversion
-
?
dimethylallyl diphosphate + 3-iodo-L-tyrosine
diphosphate + 3-iodo-4-O-dimethylallyl-L-tyrosine
show the reaction diagram
-
100% conversion
-
?
dimethylallyl diphosphate + 4-amino-L-phenylalanine
diphosphate + 4-(dimethylallylamino)-L-phenylalanine
show the reaction diagram
-
66.1% conversion
-
?
dimethylallyl diphosphate + alpha-methyl-L-tyrosine
diphosphate + alpha-methyl-4-O-dimethylallyl-L-tyrosine
show the reaction diagram
-
89.4% conversion
-
?
dimethylallyl diphosphate + D-tyrosine
diphosphate + 4-O-dimethylallyl-D-tyrosine
show the reaction diagram
-
57.6% conversion
-
?
dimethylallyl diphosphate + L-3,4-dihydroxyphenylalanine
?
show the reaction diagram
16.6% of the activity, compared to L-tyrosine. It is expected that the prenylation takes place at the 4-hydroxyl group. The structure of the product is not determined
-
-
?
dimethylallyl diphosphate + L-tryptophan
diphosphate + 1-(2-methylbut-3-en-2-yl)-L-tryptophan
show the reaction diagram
reverse prenylation
-
-
?
dimethylallyl diphosphate + L-tryptophan
diphosphate + 7-dimethylallyl-L-tryptophan
show the reaction diagram
-
-
-
?
dimethylallyl diphosphate + L-tryptophan
diphosphate + 7-dimethylallyltryptophan
show the reaction diagram
catalytic efficiency for L-tryptophan is 6% compared to catalytic efficiency for L-tyrosine
-
-
?
dimethylallyl diphosphate + L-tyrosine
diphosphate + 4-O-dimethylallyl-L-tyrosine
show the reaction diagram
methylallyl diphosphate + 4-amino-L-phenylalanine
diphosphate + 4-(methylallylamino)-L-phenylalanine
show the reaction diagram
-
34.8% conversion
-
?
methylallyl diphosphate + L-tyrosine
diphosphate + 4-O-methylallyl-L-tyrosine
show the reaction diagram
-
28% conversion
-
?
prop-2-en-1-yl diphosphate + L-tyrosine
O-[prop-2-en-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
prop-2-yn-1-yl diphosphate + L-tyrosine
O-[prop-2-yn-1-yl]-L-tyrosine + diphosphate
show the reaction diagram
-
-
-
?
dimethylallyl diphosphate + 3-amino-L-tyrosine
diphosphate + 3-amino-4-O-dimethylallyl-L-tyrosine
show the reaction diagram
-
SirD catalyzes the regiospecific O-prenylation at position C4 of tyrosine and derivatives. 3-Amino-L-tyrosine is prenylated with 108% of the activity compared to L-tyrosine
-
-
?
dimethylallyl diphosphate + 3-fluoro-DL-tyrosine
diphosphate + 4-O-dimethylallyl-3-fluoro-DL-tyrosine
show the reaction diagram
-
SirD catalyzes the regiospecific O-prenylation at position C4 of tyrosine and derivatives. 3-Iodo-L-tyrosine is prenylated with 53.6% of the activity compared to L-tyrosine
-
-
?
dimethylallyl diphosphate + 3-iodo-L-tyrosine
diphosphate + 4-O-dimethylallyl-3-iodo-L-tyrosine
show the reaction diagram
-
SirD catalyzes the regiospecific O-prenylation at position C4 of tyrosine and derivatives. 3-Iodo-L-tyrosine is prenylated with 27.3% of the activity compared to L-tyrosine
-
-
?
dimethylallyl diphosphate + L-tyrosine
diphosphate + 4-O-dimethylallyl-L-tyrosine
show the reaction diagram
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
dimethylallyl diphosphate + L-tyrosine
diphosphate + 4-O-dimethylallyl-L-tyrosine
show the reaction diagram
dimethylallyl diphosphate + L-tyrosine
diphosphate + 4-O-dimethylallyl-L-tyrosine
show the reaction diagram
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Ca2+
5 mM, 1.4fold activation compared to activity without additives
Mg2+
5 mM used in assay conditions
additional information
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
EDTA
5 mM, 12% inhibition
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.17
(2E)-2-methylpenta-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.2
(2E)-3-methylpent-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.73
(2E)-5-methylhexa-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.07
(2E)-but-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.26
(2E)-penta-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.12
(2E,4Z)-2-methylhexa-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.05
(2Z)-3-chlorobut-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.21
2-cyclohexylideneethyl diphosphate
at pH 7.5 and 35°C
0.22
2-pentenyl diphosphate
cosubstrate 4-hydroxyphenylalanine, pH 7.5, 37°C
0.24
3-ethylpent-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.75
benzyl diphosphate
cosubstrate 4-aminophenylalanine, pH 7.5, 37°C
0.13
cyclohex-1-en-1-ylmethyl diphosphate
at pH 7.5 and 35°C
0.17 - 0.23
dimethylallyl diphosphate
0.37
L-tryptophan
pH 8.0, 30°C
0.13 - 0.3
L-tyrosine
0.13
methylallyl diphosphate
cosubstrate 4-hydroxyphenylalanine, pH 7.5, 37°C
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.00367
(2E)-2-methylpenta-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.3
(2E)-3-methylpent-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.00167
(2E)-5-methylhexa-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.001
(2E)-but-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.00083
(2E)-penta-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.0123
(2E,4Z)-2-methylhexa-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.00067
(2Z)-3-chlorobut-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.0583
2-cyclohexylideneethyl diphosphate
at pH 7.5 and 35°C
0.002
2-pentenyl diphosphate
cosubstrate 4-hydroxyphenylalanine, pH 7.5, 37°C
0.055
3-ethylpent-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.028
benzyl diphosphate
cosubstrate 4-aminophenylalanine, pH 7.5, 37°C
0.0055
cyclohex-1-en-1-ylmethyl diphosphate
at pH 7.5 and 35°C
0.683 - 1
dimethylallyl diphosphate
0.095
L-tryptophan
pH 8.0, 30°C
1 - 1.3
L-tyrosine
0.003
methylallyl diphosphate
cosubstrate 4-hydroxyphenylalanine, pH 7.5, 37°C
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0217
(2E)-2-methylpenta-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
1.5
(2E)-3-methylpent-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.0023
(2E)-5-methylhexa-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.015
(2E)-but-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.0033
(2E)-penta-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.1017
(2E,4Z)-2-methylhexa-2,4-dien-1-yl diphosphate
at pH 7.5 and 35°C
0.0167
(2Z)-3-chlorobut-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.267
2-cyclohexylideneethyl diphosphate
at pH 7.5 and 35°C
0.098
2-pentenyl diphosphate
cosubstrate 4-hydroxyphenylalanine, pH 7.5, 37°C
0.23
3-ethylpent-2-en-1-yl diphosphate
at pH 7.5 and 35°C
0.037
benzyl diphosphate
cosubstrate 4-aminophenylalanine, pH 7.5, 37°C
0.042
cyclohex-1-en-1-ylmethyl diphosphate
at pH 7.5 and 35°C
2.97 - 5.88
dimethylallyl diphosphate
0.26
L-tryptophan
pH 8.0, 30°C
4.3 - 7.7
L-tyrosine
0.021
methylallyl diphosphate
cosubstrate 4-hydroxyphenylalanine, pH 7.5, 37°C
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
the enzyme is involved in biosynthesis of the epidithiopiperazinedione toxin sirodesmin PL by the phytopathogenic ascomycete Leptosphaeria maculans
physiological function
-
the enzyme is involved in biosynthesis of sirodesmin PL
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
SIRD_LEPMC
448
0
50986
Swiss-Prot
other Location (Reliability: 4)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
100000
His6-tagged enzyme, gel filtration
50000
2 * 50000, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
2 * 50000, SDS-PAGE
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
Ni-NTA column chromatography
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli BL21(DE3) cells
overexpression in Escherichia coli
overproduction of His6-SirD in Escherichia coli
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
synthesis
the broad alkyl donor specificity of SirD opens the door for the interrogation of the alkyl donor specificity of other prenyltransferases for potential utility as biocatalysts for differential alkylation applications
synthesis
-
the specific 4-O-prenylation of tyrosine derivatives by SirD could find usage for production of prenylated tyrosine derivatives by chemoenzymatic synthesis
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Yu, X.; Xie, X.; Li, S.M.
Substrate promiscuity of secondary metabolite enzymes: prenylation of hydroxynaphthalenes by fungal indole prenyltransferases
Appl. Microbiol. Biotechnol.
92
737-748
2011
Leptosphaeria maculans
Manually annotated by BRENDA team
Rudolf, J.D.; Poulter, C.D.
Tyrosine O-prenyltransferase SirD catalyzes S-, C-, and N-prenylations on tyrosine and tryptophan derivatives
ACS Chem. Biol.
8
2707-2714
2013
Leptosphaeria maculans (Q6Q874), Leptosphaeria maculans
Manually annotated by BRENDA team
Zou, H.X.; Xie, X.; Zheng, X.D.; Li, S.M.
The tyrosine O-prenyltransferase SirD catalyzes O-, N-, and C-prenylations
Appl. Microbiol. Biotechnol.
89
1443-1451
2011
Leptosphaeria maculans
Manually annotated by BRENDA team
Kremer, A.; Li, S.M.
A tyrosine O-prenyltransferase catalyses the first pathway-specific step in the biosynthesis of sirodesmin PL
Microbiology
156
278-286
2010
Leptosphaeria maculans (Q6Q874), Leptosphaeria maculans
Manually annotated by BRENDA team
Yu, H.; Liebhold, M.; Xie, X.; Li, S.M.
Tyrosine O-prenyltransferases TyrPT and SirD displaying similar behavior toward unnatural alkyl or benzyl diphosphate as their natural prenyl donor dimethylallyl diphosphate
Appl. Microbiol. Biotechnol.
99
7115-7124
2015
Aspergillus niger, Leptosphaeria maculans (Q6Q874), Leptosphaeria maculans
Manually annotated by BRENDA team
Bandari, C.; Scull, E.M.; Masterson, J.M.; Tran, R.H.Q.; Foster, S.B.; Nicholas, K.M.; Singh, S.
Determination of alkyl-donor promiscuity of tyrosine-O-prenyltransferase SirD from Leptosphaeria maculans
ChemBioChem
18
2323-2327
2017
Leptosphaeria maculans (Q6Q874), Leptosphaeria maculans
Manually annotated by BRENDA team