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Information on Organism Coptis chinensis

Synonyms:
Coptis chinensis Franch.; Coptis chinensis;
Word Map for Organism Coptis chinensis
TaxTree of Organism Coptis chinensis
Condensed Tree View
cellular organisms
Eukaryota can be found in Brenda BRENDA pathways(superkingdom)
Viridiplantae can be found in Brenda BRENDA pathways(kingdom)
Streptophyta can be found in Brenda BRENDA pathways(phylum)
Streptophytina can be found in Brenda (subphylum)
Embryophyta can be found in Brenda BRENDA pathways(clade)
Tracheophyta can be found in Brenda BRENDA pathways(clade)
Euphyllophyta can be found in Brenda BRENDA pathways(clade)
Spermatophyta can be found in Brenda BRENDA pathways(clade)
Magnoliopsida can be found in Brenda BRENDA pathways(class)
Mesangiospermae can be found in Brenda (clade)
Ranunculales can be found in Brenda BRENDA pathways(order)
Ranunculaceae can be found in Brenda BRENDA pathways(family)
Coptidoideae can be found in Brenda (subfamily)
Coptis can be found in Brenda BRENDA pathways(genus)
Coptis chinensis can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(R)-cysteate degradation
-
-
PWY-6642
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-reticuline biosynthesis
-
-
(S)-reticuline biosynthesis I
-
-
PWY-3581
(S)-reticuline biosynthesis II
-
-
PWY-6133
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,5-anhydrofructose degradation
-
-
PWY-6992
2'-deoxymugineic acid phytosiderophore biosynthesis
-
-
PWY-5912
3-(4-hydroxyphenyl)pyruvate biosynthesis
-
-
PWY-5886
3-phosphoinositide biosynthesis
-
-
PWY-6352
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxybenzoate biosynthesis I (eukaryotes)
-
-
PWY-5754
6-hydroxymethyl-dihydropterin diphosphate biosynthesis
-
-
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
-
-
PWY-6147
6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium)
-
-
PWY-7852
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
Aflatoxin biosynthesis
-
-
alanine metabolism
-
-
Alanine, aspartate and glutamate metabolism
-
-
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
Amino sugar and nucleotide sugar metabolism
-
-
Aminobenzoate degradation
-
-
ammonia oxidation II (anaerobic)
-
-
P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
anandamide biosynthesis I
-
-
PWY-8051
anandamide biosynthesis II
-
-
PWY-8053
androgen and estrogen metabolism
-
-
arachidonate metabolites biosynthesis
-
-
PWY-8397
Arachidonic acid metabolism
-
-
arachidonic acid metabolism
-
-
Arginine and proline metabolism
-
-
Arginine biosynthesis
-
-
aromatic biogenic amine degradation (bacteria)
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-
PWY-7431
Ascorbate and aldarate metabolism
-
-
aspartate and asparagine metabolism
-
-
Atrazine degradation
-
-
atromentin biosynthesis
-
-
PWY-7518
bacterial bioluminescence
-
-
PWY-7723
berberine biosynthesis
-
-
PWY-3901
beta-Alanine metabolism
-
-
Bifidobacterium shunt
-
-
P124-PWY
bile acid biosynthesis, neutral pathway
Biosynthesis of secondary metabolites
-
-
bryostatin biosynthesis
-
-
PWY-8047
bupropion degradation
-
-
PWY66-241
Butanoate metabolism
-
-
C20 prostanoid biosynthesis
-
-
PWY66-374
C4 and CAM-carbon fixation
-
-
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
Caffeine metabolism
-
-
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
camalexin biosynthesis
-
-
CAMALEXIN-SYN
Carbon fixation in photosynthetic organisms
-
-
Carbon fixation pathways in prokaryotes
-
-
carnitine metabolism
-
-
CDP-diacylglycerol biosynthesis
-
-
CDP-diacylglycerol biosynthesis I
-
-
PWY-5667
CDP-diacylglycerol biosynthesis II
-
-
PWY0-1319
chelerythrine biosynthesis
-
-
PWY-7507
Citrate cycle (TCA cycle)
-
-
citric acid cycle
-
-
CO2 fixation in Crenarchaeota
-
-
coenzyme M biosynthesis
-
-
coenzyme M biosynthesis II
-
-
PWY-6643
creatine phosphate biosynthesis
-
-
PWY-6158
crotonosine biosynthesis
-
-
PWY-8100
Cysteine and methionine metabolism
-
-
cysteine metabolism
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-
cytosolic NADPH production (yeast)
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-
PWY-7268
D-arabinose degradation V
-
-
PWY-8334
D-galactose degradation IV
-
-
PWY-6693
denitrification
-
-
detoxification of reactive carbonyls in chloroplasts
-
-
PWY-6786
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
diacylglycerol and triacylglycerol biosynthesis
-
-
TRIGLSYN-PWY
diethylphosphate degradation
-
-
PWY-5491
dopamine degradation
-
-
PWY6666-2
drosopterin and aurodrosopterin biosynthesis
-
-
PWY-7442
Drug metabolism - cytochrome P450
-
-
Drug metabolism - other enzymes
-
-
Entner-Doudoroff pathway I
-
-
PWY-8004
erythro-tetrahydrobiopterin biosynthesis I
-
-
PWY-5663
ethanol degradation IV
-
-
PWY66-162
ethene biosynthesis I (plants)
-
-
ETHYL-PWY
ethene biosynthesis III (microbes)
-
-
PWY-6854
farnesylcysteine salvage pathway
-
-
PWY-6577
Fatty acid biosynthesis
-
-
fatty acid biosynthesis initiation (mitochondria)
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-
PWY66-429
fatty acid biosynthesis initiation (plant mitochondria)
-
-
PWY-6799
fatty acid biosynthesis initiation (type I)
-
-
PWY-5966-1
fatty acid biosynthesis initiation (type II)
-
-
PWY-4381
Fatty acid degradation
-
-
Folate biosynthesis
-
-
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
formaldehyde oxidation I
-
-
RUMP-PWY
Fructose and mannose metabolism
-
-
Galactose metabolism
-
-
gliotoxin biosynthesis
-
-
PWY-7533
gluconeogenesis
-
-
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glutamate and glutamine metabolism
-
-
Glutathione metabolism
-
-
glutathione metabolism
-
-
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glutathione-peroxide redox reactions
-
-
PWY-4081
glycerol-3-phosphate to fumarate electron transfer
-
-
PWY0-1582
Glycerolipid metabolism
-
-
Glycerophospholipid metabolism
-
-
Glycine, serine and threonine metabolism
-
-
glycogen biosynthesis
-
-
glycogen biosynthesis II (from UDP-D-Glucose)
-
-
PWY-5067
glycolysis
-
-
Glycolysis / Gluconeogenesis
-
-
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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-
PWY-5484
glycolysis III (from glucose)
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-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
Glycosaminoglycan degradation
-
-
Glyoxylate and dicarboxylate metabolism
-
-
heme degradation I
-
-
PWY-5874
heterolactic fermentation
-
-
P122-PWY
Histidine metabolism
-
-
hydrogen to fumarate electron transfer
-
-
PWY0-1576
hydroxycinnamic acid tyramine amides biosynthesis
-
-
PWY-5474
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis VI (bacteria)
-
-
TRPIAACAT-PWY
Inositol phosphate metabolism
-
-
inulin degradation
-
-
PWY-8314
Isoquinoline alkaloid biosynthesis
-
-
jadomycin biosynthesis
-
-
PWY-6679
L-alanine biosynthesis II
-
-
ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation III
-
-
ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
-
-
PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-arabinose degradation II
-
-
PWY-5515
L-arginine biosynthesis I (via L-ornithine)
-
-
ARGSYN-PWY
L-arginine biosynthesis II (acetyl cycle)
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-
ARGSYNBSUB-PWY
L-arginine biosynthesis IV (archaea)
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-
PWY-7400
L-arginine degradation XIII (reductive Stickland reaction)
-
-
PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
-
-
PWY-6344
L-asparagine degradation III (mammalian)
-
-
ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
-
-
ASPARTATESYN-PWY
L-aspartate degradation I
-
-
ASPARTATE-DEG1-PWY
L-citrulline biosynthesis
-
-
CITRULBIO-PWY
L-citrulline degradation
-
-
CITRULLINE-DEG-PWY
L-glutamate degradation II
-
-
GLUTDEG-PWY
L-histidine degradation V
-
-
PWY-5031
L-lactaldehyde degradation
-
-
L-methionine degradation I (to L-homocysteine)
-
-
METHIONINE-DEG1-PWY
L-nicotianamine biosynthesis
-
-
PWY-5957
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine degradation II (anaerobic)
-
-
ANAPHENOXI-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
-
-
PWY-8014
L-threonine degradation III (to methylglyoxal)
-
-
THRDLCTCAT-PWY
L-tryptophan degradation IV (via indole-3-lactate)
-
-
TRPKYNCAT-PWY
L-tryptophan degradation VI (via tryptamine)
-
-
PWY-3181
L-tryptophan degradation VIII (to tryptophol)
-
-
PWY-5081
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
PWY-6307
L-tryptophan degradation XIII (reductive Stickland reaction)
-
-
PWY-8017
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine degradation I
-
-
TYRFUMCAT-PWY
L-tyrosine degradation II
-
-
PWY-5151
L-tyrosine degradation III
-
-
PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
-
-
PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
-
-
PWY-8016
lactate fermentation
-
-
Linoleic acid metabolism
-
-
lipid metabolism
-
-
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
melatonin degradation I
-
-
PWY-6398
melatonin degradation II
-
-
PWY-6399
Metabolic pathways
-
-
metabolism of disaccharids
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methanofuran biosynthesis
-
-
PWY-5254
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methionine metabolism
-
-
methyl indole-3-acetate interconversion
-
-
PWY-6303
methylaspartate cycle
methylglyoxal degradation III
-
-
PWY-5453
methylsalicylate degradation
-
-
PWY18C3-24
Microbial metabolism in diverse environments
-
-
mitochondrial L-carnitine shuttle
-
-
PWY-6111
mixed acid fermentation
-
-
FERMENTATION-PWY
mupirocin biosynthesis
-
-
PWY-8012
mycobactin biosynthesis
-
-
PWY185E-1
NAD metabolism
-
-
NAD salvage pathway V (PNC V cycle)
-
-
PWY3O-4107
NADH to fumarate electron transfer
-
-
PWY0-1336
Nicotinate and nicotinamide metabolism
-
-
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
Nitrogen metabolism
-
-
non-pathway related
-
-
noradrenaline and adrenaline degradation
-
-
PWY-6342
noscapine biosynthesis
-
-
PWY-7138
Novobiocin biosynthesis
-
-
o-diquinones biosynthesis
-
-
PWY-6752
octopamine biosynthesis
-
-
PWY-7297
oleandomycin activation/inactivation
-
-
PWY-6972
oleate biosynthesis III (cyanobacteria)
-
-
PWY-7587
Other glycan degradation
-
-
Other types of O-glycan biosynthesis
-
-
Oxidative phosphorylation
-
-
palmatine biosynthesis
-
-
PWY-5470
palmitoyl ethanolamide biosynthesis
-
-
PWY-8055
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
pederin biosynthesis
-
-
PWY-8049
Penicillin and cephalosporin biosynthesis
-
-
pentachlorophenol degradation
-
-
PCPDEG-PWY
Pentose and glucuronate interconversions
-
-
Pentose phosphate pathway
-
-
pentose phosphate pathway
-
-
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
pentose phosphate pathway (oxidative branch) I
-
-
OXIDATIVEPENT-PWY
Peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis II (staphylococci)
-
-
PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
PWY-6471
peptidoglycan maturation (meso-diaminopimelate containing)
-
-
PWY0-1586
Phenylalanine metabolism
-
-
Phenylalanine, tyrosine and tryptophan biosynthesis
-
-
phenylethanol biosynthesis
-
-
PWY-5751
phenylethylamine degradation I
-
-
2PHENDEG-PWY
phosphate acquisition
-
-
PWY-6348
phosphatidate biosynthesis (yeast)
-
-
PWY-7411
photosynthesis
-
-
Porphyrin and chlorophyll metabolism
-
-
preQ0 biosynthesis
-
-
PWY-6703
Primary bile acid biosynthesis
-
-
Propanoate metabolism
-
-
propionate fermentation
-
-
protein ubiquitination
-
-
PWY-7511
Purine metabolism
-
-
putrescine degradation III
-
-
PWY-0
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to propanoate I
-
-
P108-PWY
Pyruvate metabolism
-
-
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
Retinol metabolism
-
-
Riboflavin metabolism
-
-
rosmarinic acid biosynthesis I
-
-
PWY-5048
S-adenosyl-L-methionine biosynthesis
-
-
SAM-PWY
S-adenosyl-L-methionine salvage I
-
-
PWY-6151
S-adenosyl-L-methionine salvage II
-
-
PWY-5041
salidroside biosynthesis
-
-
PWY-6802
saponin biosynthesis II
-
-
PWY-5756
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
serotonin degradation
-
-
PWY-6313
serotonin metabolism
-
-
Sphingolipid metabolism
-
-
Starch and sucrose metabolism
-
-
Steroid biosynthesis
-
-
Steroid hormone biosynthesis
-
-
sterol:steryl ester interconversion (yeast)
-
-
PWY-7424
stigma estolide biosynthesis
-
-
PWY-6453
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
-
-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
succinate to plastoquinol oxidase
-
-
PWY1YI0-8
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sulfolactate degradation III
-
-
PWY-6638
sulfopterin metabolism
-
-
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
-
-
GLYCOLYSIS-E-D
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
Terpenoid backbone biosynthesis
-
-
tetrahydrofolate metabolism
-
-
tetrahydromonapterin biosynthesis
-
-
PWY0-1433
Thiamine metabolism
-
-
threo-tetrahydrobiopterin biosynthesis
-
-
PWY-6983
threonine metabolism
-
-
thyroid hormone metabolism II (via conjugation and/or degradation)
-
-
PWY-6261
triacylglycerol degradation
-
-
LIPAS-PWY
Tropane, piperidine and pyridine alkaloid biosynthesis
-
-
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
urea cycle
urea degradation II
-
-
PWY-5704
vancomycin resistance I
-
-
PWY-6454
vanillin biosynthesis I
-
-
PWY-5665
vitamin B1 metabolism
-
-
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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ORGANISM
UNIPROT
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LITERATURE
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LINKS TO OTHER DATABASES (specific for Coptis chinensis)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA