Reference on EC 2.7.4.3 - adenylate kinase and Organism(s) Escherichia coli and UniProt Accession P69441
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AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Hiraga, S.; Sugino, Y.
Utilisation of certain derivatives of alanine and arginine by yeasts
Biochim. Biophys. Acta
119
416-418
1966
Escherichia coli, Escherichia coli JE24F+
Noda, L.
Adenylate kinase
The Enzymes,3rd Ed. (Boyer,P. D. ,ed. )
8
279-305
1973
Bacillus subtilis, Bos taurus, Saccharomyces cerevisiae, Citrus limon, Blattidae, Oryctolagus cuniculus, Escherichia coli, Homo sapiens, Mus musculus, Physarum polycephalum, Rattus norvegicus, Sus scrofa, Thiobacillus denitrificans, Triticum aestivum
-
Haase, G.H.W.; Brune, M.; Reinstein, J.; Pai, E.F.; Pingoud, A.; Wittinghofer, A.
Adenylate kinases from thermosensitive Escherichia coli strains
J. Mol. Biol.
207
151-162
1989
Escherichia coli
Althoff, S.; Zambrowicz, B.; Liang, P.; Glaser, M.; Phillips, G.N.
Crystallization and preliminary X-ray analysis of Escherichia coli adenylate kinase [letter]
J. Mol. Biol.
199
665-666
1988
Escherichia coli
Saint Girons, I.; Gilles, A.M.; Margarita, D.; Michelson, S.; Monnot, M.; Fermandjian, S.; Danchin, A.; Brzu, O.
Structural and catalytic characteristics of Escherichia coli adenylate kinase
J. Biol. Chem.
262
622-629
1987
Escherichia coli
Glaser, P.; Prescecan, E.; Delepierre, M.; Surewicz, W.K.; Mantsch, H.H.; Brzu, O.; Gilles, A.M.
Zinc, a novel structural element found in the family of bacterial adenylate kinases
Biochemistry
31
3038-3043
1992
Geobacillus stearothermophilus, Escherichia coli
Bilderback, T.; Fulmer, T.; Mantulin, W.W.; Glaser, M.
Substrate binding causes movement in the ATP binding domain of Escherichia coli adenylate kinase
Biochemistry
35
6100-6106
1996
Escherichia coli
Dzeja, P.P.; Zeleznikar, R.J.; Goldberg, N.D.
Adenylate kinase: kinetic behavior in intact cells indicates it is integral to multiple cellular processes
Mol. Cell. Biochem.
184
169-182
1998
Escherichia coli, Rattus norvegicus
Yan, H.; Tsai, M.D.
Nucleoside monophosphate kinases: structure, mechanism, and substrate specificity
Adv. Enzymol. Relat. Areas Mol. Biol.
73
103-134
1999
Bacillus subtilis, Bos taurus, Oryctolagus cuniculus, Escherichia coli, Homo sapiens
Lin, Y.; Nageswara Rao, B.D.
Structural Characterization of Adenine Nucleotides Bound to Escherichia coli Adenylate Kinase. 2. 31P and 13C Relaxation Measurements in the Presence of Cobalt(II) and Manganese(II)
Biochemistry
39
3647-3655
2000
Escherichia coli
Lin, Y.; Nageswara Rao, B.D.
Structural Characterization of Adenine Nucleotides Bound to Escherichia coli Adenylate Kinase. 1. Adenosine Conformations by Proton Two-Dimensional Transferred Nuclear Overhauser Effect Spectroscopy
Biochemistry
39
3636-3646
2000
Escherichia coli
Willemoes, M.; Kilstrup, M.
Nucleoside triphosphate synthesis catalysed by adenylate kinase is ADP dependent
Arch. Biochem. Biophys.
444
195-199
2005
Escherichia coli
Mueller, C.W.; Schulz, G.E.
Structure of the complex between adenylate kinase from Escherichia coli and the inhibitor Ap5A refined at 1.9 A resolution. a model for a catalytic transition state
J. Mol. Biol.
224
159-177
1992
Escherichia coli
Snow, C.; Qi, G.; Hayward, S.
Essential dynamics sampling study of adenylate kinase: comparison to citrate synthase and implication for the hinge and shear mechanisms of domain motions
Proteins
67
325-337
2007
Escherichia coli
Gigliobianco, T.; Lakaye, B.; Makarchikov, A.F.; Wins, P.; Bettendorff, L.
Adenylate kinase-independent thiamine triphosphate accumulation under severe energy stress in Escherichia coli
BMC Microbiol.
8
16
2008
Escherichia coli
Aden, J.; Wolf-Watz, M.
NMR identification of transient complexes critical to adenylate kinase catalysis
J. Am. Chem. Soc.
129
14003-14012
2007
Escherichia coli (P69441)
Lu, Q.; Wang, J.
Single molecule conformational dynamics of adenylate kinase: energy landscape, structural correlations, and transition state ensembles
J. Am. Chem. Soc.
130
4772-4783
2008
Escherichia coli (P69441)
Whitford, P.C.; Gosavi, S.; Onuchic, J.N.
Conformational transitions in adenylate kinase. Allosteric communication reduces misligation
J. Biol. Chem.
283
2042-2048
2008
Escherichia coli (P69441)
Whitford, P.C.; Miyashita, O.; Levy, Y.; Onuchic, J.N.
Conformational transitions of adenylate kinase: switching by cracking
J. Mol. Biol.
366
1661-1671
2007
Escherichia coli (P69441)
Arora, K.; Brooks, C.L.
Large-scale allosteric conformational transitions of adenylate kinase appear to involve a population-shift mechanism
Proc. Natl. Acad. Sci. USA
104
18496-18501
2007
Escherichia coli (P69441)
Kubitzki, M.B.; de Groot, B.L.
The atomistic mechanism of conformational transition in adenylate kinase: a TEE-REX molecular dynamics study
Structure
16
1175-1182
2008
Escherichia coli
Krishnamurthy, H.; Munro, K.; Yan, H.; Vieille, C.
Dynamics in Thermotoga neapolitana adenylate kinase: 15N relaxation and hydrogen-deuterium exchange studies of a hyperthermophilic enzyme highly active at 30C
Biochemistry
48
2723-2739
2009
Escherichia coli, Thermotoga neapolitana
Pontiggia, F.; Zen, A.; Micheletti, C.
Small- and large-scale conformational changes of adenylate kinase: a molecular dynamics study of the subdomain motion and mechanics
Biophys. J.
95
5901-5912
2008
Escherichia coli
Chen, B.; Sysoeva, T.A.; Chowdhury, S.; Guo, L.; Nixon, B.T.
ADPase activity of recombinantly expressed thermotolerant ATPases may be caused by copurification of adenylate kinase of Escherichia coli
FEBS J.
276
807-815
2009
Escherichia coli
Tan, Y.W.; Hanson, J.A.; Yang, H.
Direct Mg2+ binding activates adenylate kinase from Escherichia coli
J. Biol. Chem.
284
3306-3313
2009
Escherichia coli
Beckstein, O.; Denning, E.J.; Perilla, J.R.; Woolf, T.B.
Zipping and unzipping of adenylate kinase: atomistic insights into the ensemble of open <--> closed transitions
J. Mol. Biol.
394
160-176
2009
Escherichia coli
Cukier, R.I.
Apo adenylate kinase encodes its holo form: a principal component and varimax analysis
J. Phys. Chem. B
113
1662-1672
2009
Escherichia coli
Schrank, T.P.; Bolen, D.W.; Hilser, V.J.
Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins
Proc. Natl. Acad. Sci. USA
106
16984-16989
2009
Escherichia coli (P69441), Escherichia coli
Adkar, B.V.; Jana, B.; Bagchi, B.
Role of water in the enzymatic catalysis: study of ATP + AMP -> 2ADP conversion by adenylate kinase
J. Phys. Chem. A
115
3691-3697
2011
Escherichia coli (P69441)
Daily, M.D.; Phillips, G.N.; Cui, Q.
Interconversion of functional motions between mesophilic and thermophilic adenylate kinases
PLoS Comput. Biol.
7
e1002103
2011
Aquifex aeolicus (O66490), Aquifex aeolicus, Escherichia coli (P69441), Escherichia coli
Armenta-Medina, D.; Perez-Rueda, E.; Segovia, L.
Identification of functional motions in the adenylate kinase (ADK) protein family by computational hybrid approaches
Proteins
79
1662-1671
2011
Escherichia coli (P69441)
Wang, Y.; Gan, L.; Wang, E.; Wang, J.
Exploring the dynamic functional landscape of adenylate kinase modulated by substrates
J. Chem. Theory Comput.
9
84-95
2013
Geobacillus stearothermophilus, Saccharomyces cerevisiae, Escherichia coli, Homo sapiens
Onuk, E.; Badger, J.; Wang, Y.J.; Bardhan, J.; Chishti, Y.; Akcakaya, M.; Brooks, D.H.; Erdogmus, D.; Minh, D.D.L.; Makowski, L.
Effects of catalytic action and ligand binding on conformational ensembles of adenylate kinase
Biochemistry
56
4559-4567
2017
Escherichia coli (P69441), Escherichia coli, Escherichia coli K12 (P69441)
Yang, F.; Li, H.
Expression of adenylate kinase fused MEK1R4F in Escherichia coli and its application in ERK phosphorylation
Biotechnol. Lett.
39
1553-1558
2017
Escherichia coli
Cui, D.; Ren, W.; Li, W.; Wang, W.
Molecular simulations of substrate release and coupled conformational motions in adenylate kinase
J. Theor. Comput. Chem.
15
1650004
2016
Escherichia coli (P69441), Escherichia coli K12 (P69441)
-
Ionescu, M.I.; Oniga, O.
Molecular docking evaluation of (E)-5-arylidene-2-thioxothiazolidin-4-one derivatives as selective bacterial adenylate kinase inhibitors
Molecules
23
1076
2018
Escherichia coli (P69441), Streptococcus pneumoniae (Q04ML5), Escherichia coli K12 (P69441)
Wang, Y.; Makowski, L.
Fine structure of conformational ensembles in adenylate kinase
Proteins
86
332-343
2018
Escherichia coli (P69441), Escherichia coli K12 (P69441)
