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Reference on EC 5.5.1.7 - Chloromuconate cycloisomerase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Schmidt, E.; Knackmuss, H.J.
Chemical structure and biodegradability of halogenated aromatic compounds. Conversion of chlorinated muconic acids into maleoylacetic acid
Biochem. J.
192
339-347
1980
Pseudomonas sp.
Manually annotated by BRENDA team
Mazur, P.; Piecken, W.A.; Budihas, S.R.; Williams, S.E.; Wong, S.; Kozarich, J.W.
cis,cis-Muconate lactonizing enzyme from Trichosporon cutaneum: evidence for a novel class of cycloisomerases in eucaryotes
Biochemistry
33
1961-1970
1994
BRENDA: Pseudomonas sp., Pseudomonas sp. B13
Textmining: Cutaneotrichosporon cutaneum, Acetobacter oeni, eukaryota, Pseudomonas putida, Saccharomyces cerevisiae, Neurospora crassa
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Hinteregger, C.; Ferschl, A.; Loidl, M.; Streichsbier, F.
Metabolism of aniline and 3-chloroaniline in Pseudomonas acidovorans CA28: evidence of isofunctional muconate cycloisomerases
J. Basic Microbiol.
33
301-309
1993
Delftia acidovorans
-
Manually annotated by BRENDA team
Solyanikova, I.P.; Maltseva, O.V.; Vollmer, M.D.; Golovleva, L.A.; Schlömann, M.
Characterization of muconate and chloromuconate cycloisomerase from Rhodococcus erythropolis 1CP: indications for functionally convergent evolution among bacterial cycloisomerases
J. Bacteriol.
177
2821-2826
1995
BRENDA: Rhodococcus erythropolis, Rhodococcus erythropolis 1CP
Textmining: Bacteria
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Schmidt, E.; Remberg, G.; Knackmuss, H.J.
Chemical structure and biodegradability of halogenated aromatic compounds. Halogenated muconic acids as intermediates
Biochem. J.
192
331-337
1980
Pseudomonas sp., Pseudomonas sp. B13
Manually annotated by BRENDA team
Don, R.H.; Weightman, A.J.; Knackmuss, H.J.; Timmis, K.N.
Transposon mutagenesis and cloning analysis of the pathways for degradation of 2,4-dichlorophenoxyacetic acid and 3-chlorobenzoate in Alcaligenes eutrophus JMP134(pJP4)
J. Bacteriol.
161
85-90
1985
Cupriavidus necator, Cupriavidus necator JMP134(pJP4)
Manually annotated by BRENDA team
Schmidt, E.
Bioconversion of 3-chlorobenzoate to 2-chloromuconate controlled by on line HPLC
Appl. Microbiol. Biotechnol.
27
347-350
1988
Cupriavidus necator, Cupriavidus necator RD330
-
Manually annotated by BRENDA team
Ngai, K.L.; Ornston, L.N.
Abundant expression of pseudomonas genes for chlorocatechol metabolism
J. Bacteriol.
170
2412-2413
1988
BRENDA: Pseudomonas sp.
Textmining: Pseudomonas
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Schmidt, E.; Knackmuss, H.J.
Production of cis,cis-muconate from benzoate and 2-fluoro-cis,cis-muconate from 3-fluorobenzoate by 3-chlorobenzoate degrading bacteria
Appl. Microbiol. Biotechnol.
20
351-355
1984
Alcaligenes sp., Pseudomonas sp., Pseudomonas sp. B13, Alcaligenes sp. A7-2
-
Manually annotated by BRENDA team
Schwien, U.; Schmidt, E.; Knackmuss, H.J.; Reineke, W.
Degradation of chlorosubstituted aromatic compounds by pseudomonas sp. Strain B13: fate of 3,5-dichlorocatechol
Arch. Microbiol.
150
78-84
1988
Pseudomonas sp., Pseudomonas sp. B13
-
Manually annotated by BRENDA team
Kleywegt, G.J.; Hoier, H.; Jones, T.A.
A re-evaluation of the crystal structure of chloromuconate cycloisomerase
Acta Crystallogr. Sect. D
52
858-863
1996
Cupriavidus necator
Manually annotated by BRENDA team
Hoier, H.; Schlömann, M.; Hammer, A.; Glusker, J.P.; Carrell, H.L.; Goldman, A.; Stezowski, J.J.; Heinemann, U.
Crystal structure of chloromuconate cycloisomerase from Alcaligenes eutrophus JMP134(pJP4) at 3 A resolution
Acta Crystallogr. Sect. D
50
75-84
1994
BRENDA: Cupriavidus necator
Textmining: Pseudomonas putida
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Sommer, C.; Görisch, H.
Enzymology of the degradation of (di)chlorobenzenes by Xanthomonas flavus 14p1
Arch. Microbiol.
167
384-391
1997
BRENDA: Xanthobacter flavus
Textmining: Xanthobacter flavus 14p1
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Vollmer, M.D.; Schlömann, M.
Conversion of 2-chloro-cis,cis-muconate and its metabolites 2-chloro- and 5-chloromuconolactone by chloromuconate cycloisomerases of pJP4 and pAC27
J. Bacteriol.
177
2938-2941
1995
Cupriavidus necator, Escherichia coli
Manually annotated by BRENDA team
Eulberg, D.; Kourbatova, E.M.; Golovleva, L.A.; Schlömann, M.
Evolutionary relationship between chlorocatechol catabolic enzymes from Rhodococcus opacus 1CP and their counterparts in proteobacteria: sequence divergence and functional convergence
J. Bacteriol.
180
1082-1094
1998
BRENDA: Rhodococcus opacus
Textmining: Rhodococcus opacus 1CP, Proteobacteria, Firmicutes
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Bruckmann, M.; Blasco, R.; Timmis, K.N.; Pieper, D.H.
Detoxification of protoanemonin by dienelactone hydrolase
J. Bacteriol.
180
400-402
1998
Pseudomonas sp., Pseudomonas knackmussii
Automatic Mining of ENzyme DAta
Perez-Pantoja, D.; Guzman, L.; Manzano, M.; Pieper, D.H.; Gonzalez, B.
Role of tfdC(I)D(I)E(I)F(I) and tfdD(II)C(II)E(II)F(II) gene modules in catabolism of 3-chlorobenzoate by Ralstonia eutropha JMP134(pJP4)
Appl. Environ. Microbiol.
66
1602-1608
2000
Cupriavidus necator
Automatic Mining of ENzyme DAta
Moiseeva, O.V.; Belova, O.V.; Solyanikova, I.P.; Schlomann, M.; Golovleva, L.A.
Enzymes of a new modified ortho-pathway utilizing 2-chlorophenol in Rhodococcus opacus 1CP
Biochemistry (Moscow)
66
548-555
2001
Rhodococcus opacus, Rhodococcus opacus 1CP
Manually annotated by BRENDA team
Pollmann, K.; Kaschabek, S.; Wray, V.; Reineke, W.; Pieper, D.H.
Metabolism of dichloromethylcatechols as central intermediates in the degradation of dichlorotoluenes by Ralstonia sp. strain PS12
J. Bacteriol.
184
5261-5274
2002
Ralstonia, Ralstonia sp.
Automatic Mining of ENzyme DAta
Pollmann, K.; Wray, V.; Pieper, D.H.
Chloromethylmuconolactones as critical metabolites in the degradation of chloromethylcatechols: recalcitrance of 2-chlorotoluene
J. Bacteriol.
187
2332-2340
2005
BRENDA: Ralstonia sp., Ralstonia sp. PS12
Textmining: Transformation, Cupriavidus pinatubonensis JMP134
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Schmidt, D.M.; Mundorff, E.C.; Dojka, M.; Bermudez, E.; Ness, J.E.; Govindarajan, S.; Babbitt, P.C.; Minshull, J.; Gerlt, J.A.
Evolutionary potential of (beta/alpha)8-barrels: functional promiscuity produced by single substitutions in the enolase superfamily
Biochemistry
42
8387-8393
2003
Escherichia coli
Automatic Mining of ENzyme DAta
Kolomytseva, M.; Ferraroni, M.; Chernykh, A.; Golovleva, L.; Scozzafava, A.
Structural basis for the substrate specificity and the absence of dehalogenation activity in 2-chloromuconate cycloisomerase from Rhodococcus opacus 1CP
Biochim. Biophys. Acta
1844
1541-1549
2014
BRENDA: Rhodococcus opacus (Q8G9L1)
Textmining: Pseudomonas putida PRS2000, Rhodococcus opacus 1CP, Bacteria, bacterium
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Sommer, C.; Goerisch, H.
Enzymology of the degradation of (di)chlorobenzenes by Xanthobacter flavus 14p1
Arch. Microbiol.
167
384-391
1997
Xanthobacter flavus 14p1
Automatic Mining of ENzyme DAta
Kumar, A.; Trefault, N.; Olaniran, A.O.
Microbial degradation of 2,4-dichlorophenoxyacetic acid Insight into the enzymes and catabolic genes involved, their regulation and biotechnological implications
Crit. Rev. Microbiol.
42
194-208
2016
Cupriavidus necator
Manually annotated by BRENDA team
Pollmann, K.; Kaschabek, S.; Wray, V.; Reineke, W.; Pieper, D.H.
Metabolism of dichloromethylcatechols as central intermediates in the degradation of dichlorotoluenes by Ralstonia sp. strain PS12
J. Bacteriol.
184
5261-5274
2002
Ralstonia, Ralstonia sp.
Automatic Mining of ENzyme DAta
Pollmann, K.; Wray, V.; Pieper, D.H.
Chloromethylmuconolactones as critical metabolites in the degradation of chloromethylcatechols recalcitrance of 2-chlorotoluene
J. Bacteriol.
187
2332-2340
2005
Transformation, Ralstonia sp., Cupriavidus pinatubonensis JMP134
Automatic Mining of ENzyme DAta
Hammer, A; Hildenbrand, T; Hoier, H; Ngai, KL; Schlƶmann, M; Stezowski, JJ
Crystallization and preliminary X-ray data of chloromuconate cycloisomerase from Alcaligenes eutrophus JMP134 (pJP4).
J Mol Biol
232
305-7
1993
Cupriavidus necator
Automatic Mining of ENzyme DAta
Lester, DR; Oster, LM; Svenda, M; Andersson, I
Expression, purification, crystallization and preliminary X-ray diffraction studies of the cmcI component of Streptomyces clavuligerus 7alpha-cephem-methoxylase.
Acta Crystallogr D Biol Crystallogr
60
1618-21
2004
Streptomyces clavuligerus
Automatic Mining of ENzyme DAta
Oster, LM; Lester, DR; Terwisscha van Scheltinga, A; Svenda, M; van Lun, M; GƩnƩreux, C; Andersson, I
Insights into cephamycin biosynthesis: the crystal structure of CmcI from Streptomyces clavuligerus.
J Mol Biol
358
546-58
2006
Streptomyces clavuligerus
Automatic Mining of ENzyme DAta
Shao, L; Huang, JJ; Yu, Y; Li, MX; Pu, T; Kan, SD; Chen, DJ
Improvement of 7?-methoxycephalosporins production by overexpression of cmcJ and cmcI controlled by promoter ermEp* in Streptomyces clavuligerus.
J Appl Microbiol
117
1645-54
2014
Streptomyces clavuligerus, Pseudomonas zeshuii
Automatic Mining of ENzyme DAta
Dimitriadis, SI; Liparas, D; Tsolaki, MN; ,
Random forest feature selection, fusion and ensemble strategy: Combining multiple morphological MRI measures to discriminate among healhy elderly, MCI, cMCI and alzheimer's disease patients: From the alzheimer's disease neuroimaging initiative (ADNI) database.
J Neurosci Methods
2017
Homo sapiens
Automatic Mining of ENzyme DAta
Kahler, CM; Pemberton, JM
Cloning and Characterization of Two Closely Linked Cellulase Genes from Cellvibrio mixtus
Curr Microbiol
33
60-6
1996
Cellvibrio mixtus, Escherichia coli
Automatic Mining of ENzyme DAta
Solianikova, IP; Mal'tseva, OV; Golovleva, LA
[Purification and properties of pyrocatechase II from Pseudomonas putida strain 87]
Biokhimiia
57
1883-91
1992
Pseudomonas putida
Automatic Mining of ENzyme DAta
Roth, C; Kaschabek, SR; Gröning, JA; Handrek, T; Schlömann, M; Sträter, N
Crystallization and preliminary characterization of chloromuconolactone dehalogenase from Rhodococcus opacus 1CP.
Acta Crystallogr Sect F Struct Biol Cryst Commun
68
591-5
2012
Proteobacteria, Rhodococcus opacus
Automatic Mining of ENzyme DAta
Gröning, JA; Roth, C; Kaschabek, SR; Sträter, N; Schlömann, M
Recombinant expression of a unique chloromuconolactone dehalogenase ClcF from Rhodococcus opacus 1CP and identification of catalytically relevant residues by mutational analysis.
Arch Biochem Biophys
526
69-77
2012
Rhodococcus opacus 1CP
Automatic Mining of ENzyme DAta
Vollmer, MD; Schell, U; Seibert, V; Lakner, S; Schlƶmann, M
Substrate specificities of the chloromuconate cycloisomerases from Pseudomonas sp. B13, Ralstonia eutropha JMP134 and Pseudomonas sp. P51.
Appl Microbiol Biotechnol
51
598-605
1999
Pseudomonas sp., Pseudomonas, Ralstonia, Cupriavidus necator, Cupriavidus pinatubonensis JMP134, Acetobacter oeni, Eutropha, Escherichia coli
Automatic Mining of ENzyme DAta
Laemmli, CM; Leveau, JH; Zehnder, AJ; van der Meer, JR
Characterization of a second tfd gene cluster for chlorophenol and chlorocatechol metabolism on plasmid pJP4 in Ralstonia eutropha JMP134(pJP4).
J Bacteriol
182
4165-72
2000
Escherichia coli
Automatic Mining of ENzyme DAta
Vedler, E; KƵiv, V; Heinaru, A
Analysis of the 2,4-dichlorophenoxyacetic acid-degradative plasmid pEST4011 of Achromobacter xylosoxidans subsp. denitrificans strain EST4002.
Gene
255
281-8
2000
Achromobacter denitrificans, Achromobacter xylosoxidans, bacterium, insertion sequences
Automatic Mining of ENzyme DAta
Liu, S; Ogawa, N; Miyashita, K
The chlorocatechol degradative genes, tfdT-CDEF, of Burkholderia sp. strain NK8 are involved in chlorobenzoate degradation and induced by chlorobenzoates and chlorocatechols.
Gene
268
207-14
2001
Plasmid pJP4, Cupriavidus pinatubonensis JMP134, Burkholderia sp., Aquamicrobium soli, Burkholderia
Automatic Mining of ENzyme DAta
Laemmli, CM; Schƶnenberger, R; Suter, M; Zehnder, AJ; van der Meer, JR
TfdD(II), one of the two chloromuconate cycloisomerases of Ralstonia eutropha JMP134 (pJP4), cannot efficiently convert 2-chloro- cis, cis-muconate to trans-dienelactone to allow growth on 3-chlorobenzoate.
Arch Microbiol
178
13-25
2002
Eutropha, Cupriavidus pinatubonensis JMP134, Escherichia coli, Plasmid pJP4, plasmids
Automatic Mining of ENzyme DAta
Plumeier, I; PƩrez-Pantoja, D; Heim, S; GonzƔlez, B; Pieper, DH
Importance of different tfd genes for degradation of chloroaromatics by Ralstonia eutropha JMP134.
J Bacteriol
184
4054-64
2002
Eutropha, Cupriavidus pinatubonensis JMP134, Plasmid pJP4, Transformation
Automatic Mining of ENzyme DAta
Moiseeva, OV; Solyanikova, IP; Kaschabek, SR; Grƶning, J; Thiel, M; Golovleva, LA; Schlƶmann, M
A new modified ortho cleavage pathway of 3-chlorocatechol degradation by Rhodococcus opacus 1CP: genetic and biochemical evidence.
J Bacteriol
184
5282-92
2002
Rhodococcus opacus, Rhodococcus opacus 1CP
Automatic Mining of ENzyme DAta
Solyanikova, IP; Moiseeva, OV; Boeren, S; Boersma, MG; Kolomytseva, MP; Vervoort, J; Rietjens, IM; Golovleva, LA; van Berkel, WJ
Conversion of 2-fluoromuconate to cis-dienelactone by purified enzymes of Rhodococcus opacus 1cp.
Appl Environ Microbiol
69
5636-42
2003
Rhodococcus opacus 1CP, Cutaneotrichosporon cutaneum, Rhodococcus opacus, Pseudomonas nitroreducens
Automatic Mining of ENzyme DAta
Thiel, M; Kaschabek, SR; Grƶning, J; Mau, M; Schlƶmann, M
Two unusual chlorocatechol catabolic gene clusters in Sphingomonas sp. TFD44.
Arch Microbiol
183
80-94
2005
insertion sequences
Automatic Mining of ENzyme DAta
Li, TH; Chen, TH; Lin, HS; Liou, CW; Liu, JS; Chen, SS; Chen, WH
Uncoupling of protein C and antithrombin III activity in cerebral ischemia patients associated with cutis marmorata.
Acta Neurol Taiwan
17
233-8
2008
Homo sapiens
Automatic Mining of ENzyme DAta
Kurt, A; Alvarez-Įlvarez, R; Liras, P; Ozcengiz, G
Role of the cmcH-ccaR intergenic region and ccaR overexpression in cephamycin C biosynthesis in Streptomyces clavuligerus.
Appl Microbiol Biotechnol
2013
Streptomyces clavuligerus
Automatic Mining of ENzyme DAta
Suring, W; Meusemann, K; Blanke, A; Mariėn, J; Schol, T; Agamennone, V; Faddeeva-Vakhrusheva, A; Berg, MP; , ; Brouwer, A; van Straalen, NM; Roelofs, D
Evolutionary ecology of beta-lactam gene clusters in animals.
Mol Ecol
26
3217-3229
2017
Bacteria, Fungi
Automatic Mining of ENzyme DAta
Prestia, A; Drago, V; Rasser, PE; Bonetti, M; Thompson, PM; Frisoni, GB
Cortical Changes in Incipient Alzheimer's Disease.
J Alzheimers Dis
2010
Homo sapiens, Areas
Automatic Mining of ENzyme DAta
Coque, JJ; Enguita, FJ; MartĆ­n, JF; Liras, P
A two-protein component 7 alpha-cephem-methoxylase encoded by two genes of the cephamycin C cluster converts cephalosporin C to 7-methoxycephalosporin C.
J Bacteriol
177
2230-5
1995
Amycolatopsis lactamdurans
Automatic Mining of ENzyme DAta
Rasero, J; Amoroso, N; La Rocca, M; Tangaro, S; Bellotti, R; Stramaglia, S; ,
Multivariate regression analysis of structural MRI connectivity matrices in Alzheimer's disease.
PLoS One
12
e0187281
2017
Hippocampus
Automatic Mining of ENzyme DAta
Wu, C; Guo, S; Hong, Y; Xiao, B; Wu, Y; Zhang, Q; ,
Discrimination and conversion prediction of mild cognitive impairment using convolutional neural networks.
Quant Imaging Med Surg
8
992-1003
2018
Homo sapiens
Automatic Mining of ENzyme DAta
Lifan, Z; Sainan, B; Feng, S; Siyan, Z; Xiaoqing, L
Linezolid for the treatment of extensively drug-resistant tuberculosis: a systematic review and meta-analysis.
Int J Tuberc Lung Dis
23
1293-1307
2019
Homo sapiens
Automatic Mining of ENzyme DAta