Sequence of PBPA_VIBCH
EC Number:3.4.16.4
EC Number
Recommended Name
Accession Code
Organism
No of amino acids
Molecular Weight [Da]
Source
serine-type D-Ala-D-Ala carboxypeptidase
Q9KNU5
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
825
91987
Reaction
Preferential cleavage: (Ac)2-L-Lys-D-Ala-/-D-Ala. Also transpeptidation of peptidyl-alanyl moieties that are N-acyl substituents of D-alanine
Other sequences found for EC No. 3.4.16.4
General information:
Sequence
0 MKFIKRLLVF SLICIILGVT TIFGFYFYVK SDLPDVATLR DVQLQTPMQV FSQDGKLIAQ
60 FGEKRRIPLK LEEMPKELIE AVIATEDSRY YEHYGFDPIG ITRAAFAVLA SGSASQGAST
120 ITQQLARNFF LSNEKKVMRK VKEIFIAIHI EQLLSKQEIL ELYLNKIYLG YRSYGVGAAA
180 QAYFGKEVKD LTLGEIALIA GLPKAPSTMN PIYSVERATN RRNVVLQRML DEKYITKAEY
240 DAARAEPVLP KYHGAEIELN APYVAEIARA WMVERYGEEA AYTSGMNVYT TVDSKLQRAA
300 NQAAINNLLA YDERHGYRGA EKELWQVNQP AWSSTQLSEY LSNEPTYGDM FPAAVLSVEE
360 KSAQVWVKSY GVQTIAWEDM NWARRFINDD RQGPLPKSAN EFLAAGQQIW VRPRTQDGAI
420 TAWKLTQVPN ANTAFVAMNP ENGAVTALVG GFNFVHNKFN RATQSVRQVG SSIKPFIYSA
480 ALNKGLTLAT LINDAPINQW DESQGTAWRP KNSPPTYTGP TRLRIGLAQS KNVMAVRVLR
540 EVGLDETREY LTRFGFKLDQ LPRSETIALG AGSLTPVQMA QGFSVFANNG YFVEPFYISR
600 VENPFGNIEF SAEPKVVCHR ECSSELDEFA EQDAASPYAP KVISEQNAFL TREMLYSNIW
660 GGGEWSSDTG WNGTGWRAQA LKRRDIGGKT GTTNDSKDAW YNGYAPGIVG VAWVGFDDHS
720 RNLGKTAPNR NIEDDVSGAE SGGKTALPAW VEFMSLALQD VPVQQKAVPN NIARVRIDRD
780 TGLLTNKLDS SSMFEYFEAG TEPTEYVSEH VNESIYSTSS GEELF
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Sequence Reference
Authors
Title
Journal
Volume
Pages
Year
PubMed ID
72352
Heidelberg J.F.,Eisen J.A.,Nelson W.C.,Clayton R.A.,Gwinn M.L.,Dodson R.J.,Haft D.H.,Hickey E.K.,Peterson J.D.,Umayam L.A.,Gill S.R.,Nelson K.E.,Read T.D.,Tettelin H.,Richardson D.L.,Ermolaeva M.D.,Vamathevan J.J.,Bass S.,Qin H.,Dragoi I.,Sellers P.,McDonald L.A.,Utterback T.R.,Fleischmann R.D.,Nierman W.C.,White O.,Salzberg S.L.,Smith H.O.,Colwell R.R.,Mekalanos J.J.,Venter J.C.,Fraser C.M.
DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae.
Nature
406
477-483
2000
