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Sequence of KDM5B_HUMAN

EC Number:1.14.11.67

EC Number
Recommended Name
Accession Code
Organism
No of amino acids
Molecular Weight [Da]
Source
[histone H3]-trimethyl-L-lysine4 demethylase
Q9UGL1
Homo sapiens
1544
175658
Reaction
a [histone H3]-N6,N6,N6-trimethyl-L-lysine4 + 3 2-oxoglutarate + 3 O2 = a [histone H3]-L-lysine4 + 3 succinate + 3 formaldehyde + 3 CO2
Other sequences found for EC No. 1.14.11.67

General information:

Sequence
show sequence in fasta format
   0 MEAATTLHPG PRPALPLGGP GPLGEFLPPP ECPVFEPSWE EFADPFAFIH KIRPIAEQTG
  60 ICKVRPPPDW QPPFACDVDK LHFTPRIQRL NELEAQTRVK LNFLDQIAKY WELQGSTLKI
 120 PHVERKILDL FQLNKLVAEE GGFAVVCKDR KWTKIATKMG FAPGKAVGSH IRGHYERILN
 180 PYNLFLSGDS LRCLQKPNLT TDTKDKEYKP HDIPQRQSVQ PSETCPPARR AKRMRAEAMN
 240 IKIEPEETTE ARTHNLRRRM GCPTPKCENE KEMKSSIKQE PIERKDYIVE NEKEKPKSRS
 300 KKATNAVDLY VCLLCGSGND EDRLLLCDGC DDSYHTFCLI PPLHDVPKGD WRCPKCLAQE
 360 CSKPQEAFGF EQAARDYTLR TFGEMADAFK SDYFNMPVHM VPTELVEKEF WRLVSTIEED
 420 VTVEYGADIA SKEFGSGFPV RDGKIKLSPE EEEYLDSGWN LNNMPVMEQS VLAHITADIC
 480 GMKLPWLYVG MCFSSFCWHI EDHWSYSINY LHWGEPKTWY GVPGYAAEQL ENVMKKLAPE
 540 LFVSQPDLLH QLVTIMNPNT LMTHEVPVYR TNQCAGEFVI TFPRAYHSGF NQGFNFAEAV
 600 NFCTVDWLPL GRQCVEHYRL LHRYCVFSHD EMICKMASKA DVLDVVVAST VQKDMAIMIE
 660 DEKALRETVR KLGVIDSERM DFELLPDDER QCVKCKTTCF MSAISCSCKP GLLVCLHHVK
 720 ELCSCPPYKY KLRYRYTLDD LYPMMNALKL RAESYNEWAL NVNEALEAKI NKKKSLVSFK
 780 ALIEESEMKK FPDNDLLRHL RLVTQDAEKC ASVAQQLLNG KRQTRYRSGG GKSQNQLTVN
 840 ELRQFVTQLY ALPCVLSQTP LLKDLLNRVE DFQQHSQKLL SEETPSAAEL QDLLDVSFEF
 900 DVELPQLAEM RIRLEQARWL EEVQQACLDP SSLTLDDMRR LIDLGVGLAP YSAVEKAMAR
 960 LQELLTVSEH WDDKAKSLLK ARPRHSLNSL ATAVKEIEEI PAYLPNGAAL KDSVQRARDW
1020 LQDVEGLQAG GRVPVLDTLI ELVTRGRSIP VHLNSLPRLE TLVAEVQAWK ECAVNTFLTE
1080 NSPYSLLEVL CPRCDIGLLG LKRKQRKLKE PLPNGKKKST KLESLSDLER ALTESKETAS
1140 AMATLGEARL REMEALQSLR LANEGKLLSP LQDVDIKICL CQKAPAAPMI QCELCRDAFH
1200 TSCVAVPSIS QGLRIWLCPH CRRSEKPPLE KILPLLASLQ RIRVRLPEGD ALRYMIERTV
1260 NWQHRAQQLL SSGNLKFVQD RVGSGLLYSR WQASAGQVSD TNKVSQPPGT TSFSLPDDWD
1320 NRTSYLHSPF STGRSCIPLH GVSPEVNELL MEAQLLQVSL PEIQELYQTL LAKPSPAQQT
1380 DRSSPVRPSS EKNDCCRGKR DGINSLERKL KRRLEREGLS SERWERVKKM RTPKKKKIKL
1440 SHPKDMNNFK LERERSYELV RSAETHSLPS DTSYSEQEDS EDEDAICPAV SCLQPEGDEV
1500 DWVQCDGSCN QWFHQVCVGV SPEMAEKEDY ICVRCTVKDA PSRK
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Sequence related references
Sequence Reference
Authors
Title
Journal
Volume
Pages
Year
PubMed ID
561475
Lu P.J.,Sundquist K.,Baeckstrom D.,Poulsom R.,Hanby A.,Meier-Ewert S.,Jones T.,Mitchell M.,Pitha-Rowe P.,Freemont P.,Taylor-Papadimitriou J.
A novel gene (PLU-1) containing highly conserved putative DNA/chromatin binding motifs is specifically up-regulated in breast cancer.
J. Biol. Chem.
274
15633-15645
1999
561476
Vogt T.,Kroiss M.,McClelland M.,Gruss C.,Becker B.,Bosserhoff A.K.,Rumpler G.,Bogenrieder T.,Landthaler M.,Stolz W.
Deficiency of a novel retinoblastoma binding protein 2-homolog is a consistent feature of sporadic human melanoma skin cancer.
Lab. Invest.
79
1615-1627
1999
561477
Kashuba V.,Protopopov A.,Podowski R.,Gizatullin R.,Li J.,Klein G.,Wahlestedt C.,Zabarovsky E.
Isolation and chromosomal localization of a new human retinoblastoma binding protein 2 homologue 1a (RBBP2H1A).
Eur. J. Hum. Genet.
8
407-413
2000
561478
Gregory S.G.,Barlow K.F.,McLay K.E.,Kaul R.,Swarbreck D.,Dunham A.,Scott C.E.,Howe K.L.,Woodfine K.,Spencer C.C.A.,Jones M.C.,Gillson C.,Searle S.,Zhou Y.,Kokocinski F.,McDonald L.,Evans R.,Phillips K.,Atkinson A.,Cooper R.,Jones C.,Hall R.E.,Andrews T.D.,Lloyd C.,Ainscough R.,Almeida J.P.,Ambrose K.D.,Anderson F.,Andrew R.W.,Ashwell R.I.S.,Aubin K.,Babbage A.K.,Bagguley C.L.,Bailey J.,Beasley H.,Bethel G.,Bird C.P.,Bray-Allen S.,Brown J.Y.,Brown A.J.,Buckley D.,Burton J.,Bye J.,Carder C.,Chapman J.C.,Clark S.Y.,Clarke G.,Clee C.,Cobley V.,Collier R.E.,Corby N.,Coville G.J.,Davies J.,Deadman R.,Dunn M.,Earthrowl M.,Ellington A.G.,Errington H.,Frankish A.,Frankland J.,French L.,Garner P.,Garnett J.,Gay L.,Ghori M.R.J.,Gibson R.,Gilby L.M.,Gillett W.,Glithero R.J.,Grafham D.V.,Griffiths C.,Griffiths-Jones S.,Grocock R.,Hammond S.,Harrison E.S.I.,Hart E.,Haugen E.,Heath P.D.,Holmes S.,Holt K.,Howden P.J.,Hunt A.R.,Hunt S.E.,Hunter G.,Isherwood J.,James R.,Johnson C.,Johnson D.,Joy A.,Kay M.,Kershaw J.K.,Kibukawa M.,Kimberley A.M.,King A.,Knights A.J.,Lad H.,Laird G.,Lawlor S.,Leongamornlert D.A.,Lloyd D.M.,Loveland J.,Lovell J.,Lush M.J.,Lyne R.,Martin S.,Mashreghi-Mohammadi M.,Matthews L.,Matthews N.S.W.,McLaren S.,Milne S.,Mistry S.,Moore M.J.F.,Nickerson T.,O'Dell C.N.,Oliver K.,Palmeiri A.,Palmer S.A.,Parker A.,Patel D.,Pearce A.V.,Peck A.I.,Pelan S.,Phelps K.,Phillimore B.J.,Plumb R.,Rajan J.,Raymond C.,Rouse G.,Saenphimmachak C.,Sehra H.K.,Sheridan E.,Shownkeen R.,Sims S.,Skuce C.D.,Smith M.,Steward C.,Subramanian S.,Sycamore N.,Tracey A.,Tromans A.,Van Helmond Z.,Wall M.,Wallis J.M.,White S.,Whitehead S.L.,Wilkinson J.E.,Willey D.L.,Williams H.,Wilming L.,Wray P.W.,Wu Z.,Coulson A.,Vaudin M.,Sulston J.E.,Durbin R.M.,Hubbard T.,Wooster R.,Dunham I.,Carter N.P.,McVean G.,Ross M.T.,Harrow J.,Olson M.V.,Beck S.,Rogers J.,Bentley D.R.
The DNA sequence and biological annotation of human chromosome 1.
Nature
441
315-321
2006
561479
Barrett A.,Madsen B.,Copier J.,Lu P.J.,Cooper L.,Scibetta A.G.,Burchell J.,Taylor-Papadimitriou J.
PLU-1 nuclear protein, which is upregulated in breast cancer, shows restricted expression in normal human adult tissues: a new cancer/testis antigen?
Int. J. Cancer
101
581-588
2002
561480
Tan K.,Shaw A.L.,Madsen B.,Jensen K.,Taylor-Papadimitriou J.,Freemont P.S.
Human PLU-1 has transcriptional repression properties and interacts with the developmental transcription factors BF-1 and PAX9.
J. Biol. Chem.
278
20507-20513
2003
561481
Roesch A.,Becker B.,Meyer S.,Wild P.,Hafner C.,Landthaler M.,Vogt T.
Retinoblastoma-binding protein 2-homolog 1: a retinoblastoma-binding protein downregulated in malignant melanomas.
Mod. Pathol.
18
1249-1257
2005
561482
Roesch A.,Becker B.,Schneider-Brachert W.,Hagen I.,Landthaler M.,Vogt T.
Re-expression of the retinoblastoma-binding protein 2-homolog 1 reveals tumor-suppressive functions in highly metastatic melanoma cells.
J. Invest. Dermatol.
126
1850-1859
2006
561483
Christensen J.,Agger K.,Cloos P.A.C.,Pasini D.,Rose S.,Sennels L.,Rappsilber J.,Hansen K.H.,Salcini A.E.,Helin K.
RBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3.
Cell
128
1063-1076
2007
561484
Secombe J.,Li L.,Carlos L.,Eisenman R.N.
The Trithorax group protein Lid is a trimethyl histone H3K4 demethylase required for dMyc-induced cell growth.
Genes Dev.
21
537-551
2007
561485
Barrett A.,Santangelo S.,Tan K.,Catchpole S.,Roberts K.,Spencer-Dene B.,Hall D.,Scibetta A.,Burchell J.,Verdin E.,Freemont P.,Taylor-Papadimitriou J.
Breast cancer associated transcriptional repressor PLU-1/JARID1B interacts directly with histone deacetylases.
Int. J. Cancer
121
265-275
2007
561486
Yamane K.,Tateishi K.,Klose R.J.,Fang J.,Fabrizio L.A.,Erdjument-Bromage H.,Taylor-Papadimitriou J.,Tempst P.,Zhang Y.
PLU-1 is an H3K4 demethylase involved in transcriptional repression and breast cancer cell proliferation.
Mol. Cell
25
801-812
2007
561487
Dephoure N.,Zhou C.,Villen J.,Beausoleil S.A.,Bakalarski C.E.,Elledge S.J.,Gygi S.P.
A quantitative atlas of mitotic phosphorylation.
Proc. Natl. Acad. Sci. U.S.A.
105
10762-10767
2008
561488
Zhou H.,Di Palma S.,Preisinger C.,Peng M.,Polat A.N.,Heck A.J.,Mohammed S.
Toward a comprehensive characterization of a human cancer cell phosphoproteome.
J. Proteome Res.
12
260-271
2013
561489
Hendriks I.A.,D'Souza R.C.,Yang B.,Verlaan-de Vries M.,Mann M.,Vertegaal A.C.
Uncovering global SUMOylation signaling networks in a site-specific manner.
Nat. Struct. Mol. Biol.
21
927-936
2014
561490
Xiao Z.,Chang J.G.,Hendriks I.A.,Sigurdsson J.O.,Olsen J.V.,Vertegaal A.C.
System-wide analysis of SUMOylation dynamics in response to replication stress reveals novel small ubiquitin-like modified target proteins and acceptor lysines relevant for genome stability.
Mol. Cell. Proteomics
14
1419-1434
2015
561491
Horton J.R.,Engstrom A.,Zoeller E.L.,Liu X.,Shanks J.R.,Zhang X.,Johns M.A.,Vertino P.M.,Fu H.,Cheng X.
Characterization of a Linked Jumonji Domain of the KDM5/JARID1 Family of Histone H3 Lysine 4 Demethylases.
J. Biol. Chem.
291
2631-2646
2016
561492
Hendriks I.A.,Lyon D.,Young C.,Jensen L.J.,Vertegaal A.C.,Nielsen M.L.
Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
Nat. Struct. Mol. Biol.
24
325-336
2017
561493
Faundes V.,Newman W.G.,Bernardini L.,Canham N.,Clayton-Smith J.,Dallapiccola B.,Davies S.J.,Demos M.K.,Goldman A.,Gill H.,Horton R.,Kerr B.,Kumar D.,Lehman A.,McKee S.,Morton J.,Parker M.J.,Rankin J.,Robertson L.,Temple I.K.,Banka S.
Histone lysine methylases and demethylases in the landscape of human developmental disorders.
Am. J. Hum. Genet.
102
175-187
2018
561494
Martin H.C.,Jones W.D.,McIntyre R.,Sanchez-Andrade G.,Sanderson M.,Stephenson J.D.,Jones C.P.,Handsaker J.,Gallone G.,Bruntraeger M.,McRae J.F.,Prigmore E.,Short P.,Niemi M.,Kaplanis J.,Radford E.J.,Akawi N.,Balasubramanian M.,Dean J.,Horton R.,Hulbert A.,Johnson D.S.,Johnson K.,Kumar D.,Lynch S.A.,Mehta S.G.,Morton J.,Parker M.J.,Splitt M.,Turnpenny P.D.,Vasudevan P.C.,Wright M.,Bassett A.,Gerety S.S.,Wright C.F.,FitzPatrick D.R.,Firth H.V.,Hurles M.E.,Barrett J.C.
Quantifying the contribution of recessive coding variation to developmental disorders.
Science
362
1161-1164
2018
561495
Zhang Y.,Yang H.,Guo X.,Rong N.,Song Y.,Xu Y.,Lan W.,Zhang X.,Liu M.,Xu Y.,Cao C.
The PHD1 finger of KDM5B recognizes unmodified H3K4 during the demethylation of histone H3K4me2/3 by KDM5B.
Protein Cell
5
837-850
2014
561496
Bavetsias V.,Lanigan R.M.,Ruda G.F.,Atrash B.,McLaughlin M.G.,Tumber A.,Mok N.Y.,Le Bihan Y.V.,Dempster S.,Boxall K.J.,Jeganathan F.,Hatch S.B.,Savitsky P.,Velupillai S.,Krojer T.,England K.S.,Sejberg J.,Thai C.,Donovan A.,Pal A.,Scozzafava G.,Bennett J.M.,Kawamura A.,Johansson C.,Szykowska A.,Gileadi C.,Burgess-Brown N.A.,von Delft F.,Oppermann U.,Walters Z.,Shipley J.,Raynaud F.I.,Westaway S.M.,Prinjha R.K.,Fedorov O.,Burke R.,Schofield C.J.,Westwood I.M.,Bountra C.,Muller S.,van Montfort R.L.,Brennan P.E.,Blagg J.
8-Substituted Pyrido[3,4-d]pyrimidin-4(3H)-one Derivatives As Potent, Cell Permeable, KDM4 (JMJD2) and KDM5 (JARID1) Histone Lysine Demethylase Inhibitors.
J. Med. Chem.
59
1388-1409
2016
561497
Johansson C.,Velupillai S.,Tumber A.,Szykowska A.,Hookway E.S.,Nowak R.P.,Strain-Damerell C.,Gileadi C.,Philpott M.,Burgess-Brown N.,Wu N.,Kopec J.,Nuzzi A.,Steuber H.,Egner U.,Badock V.,Munro S.,LaThangue N.B.,Westaway S.,Brown J.,Athanasou N.,Prinjha R.,Brennan P.E.,Oppermann U.
Structural analysis of human KDM5B guides histone demethylase inhibitor development.
Nat. Chem. Biol.
12
539-545
2016
561498
Tumber A.,Nuzzi A.,Hookway E.S.,Hatch S.B.,Velupillai S.,Johansson C.,Kawamura A.,Savitsky P.,Yapp C.,Szykowska A.,Wu N.,Bountra C.,Strain-Damerell C.,Burgess-Brown N.A.,Ruda G.F.,Fedorov O.,Munro S.,England K.S.,Nowak R.P.,Schofield C.J.,La Thangue N.B.,Pawlyn C.,Davies F.,Morgan G.,Athanasou N.,Muller S.,Oppermann U.,Brennan P.E.
Potent and Selective KDM5 Inhibitor Stops Cellular Demethylation of H3K4me3 at Transcription Start Sites and Proliferation of MM1S Myeloma Cells.
Cell Chem. Biol.
24
371-380
2017