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Organism related
Word Map for Organism Quercus rubra
- Quercus rubra
- maple
- velutina
- rubrum
- grandifolia
- saccharum
- betula
- serotina
- chestnut
- strobus
-
lumber
- papyrifera
- lenta
- tsuga
- tulipifera
- alleghaniensis
- fraxinus
- ozarks
- liriodendron
- arkansas
-
yellow-poplar
-
haldeman
-
overstory
- hickory
- hemlock
-
acorn
- bole
-
missouri
-
prinus
- fagacearum
- inch
- fagaceae
- pseudoplatanus
- lymantria
-
gypsy
-
furniture
- kiln
-
clearcutting
-
silvicultural
-
shelterwoods
-
veneer
-
oak-dominated
-
harvard
-
cerambycidae
-
tree-ring
-
kiln-drying
-
oak-hickory
- styraciflua
-
uncut
-
liquidambar
- sawmill
TaxTree of Organism Quercus rubra
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PATHWAY 
BRENDA Link
KEGG Link
MetaCyc Link
(aminomethyl)phosphonate degradation
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-
PWY-7805
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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-
PWY-7013
1,3-propanediol biosynthesis (engineered)
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PWY-7385
1,5-anhydrofructose degradation
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PWY-6992
1-butanol autotrophic biosynthesis (engineered)
-
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PWY-6886
3-methyl-branched fatty acid alpha-oxidation
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PWY66-387
3-methylbutanol biosynthesis (engineered)
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PWY-6871
4-aminobutanoate degradation V
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PWY-5022
4-hydroxy-2-nonenal detoxification
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-
PWY-7112
acetaldehyde biosynthesis I
-
-
PWY-6333
acetaldehyde biosynthesis II
-
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PWY-6330
acetylene degradation (anaerobic)
-
-
P161-PWY
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alkane oxidation
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-
PWY-2724
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
alpha-tomatine degradation
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-
PWY18C3-5
ammonia oxidation II (anaerobic)
-
-
P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
arachidonate metabolites biosynthesis
-
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PWY-8397
aromatic biogenic amine degradation (bacteria)
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PWY-7431
ATP biosynthesis
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PWY-7980
Bifidobacterium shunt
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-
P124-PWY
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C20 prostanoid biosynthesis
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PWY66-374
C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
Calvin-Benson-Bassham cycle
-
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CALVIN-PWY
camalexin biosynthesis
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CAMALEXIN-SYN
capsiconiate biosynthesis
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-
PWY-6027
CDP-6-deoxy-D-gulose biosynthesis
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PWY-8139
cellulose degradation II (fungi)
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PWY-6788
ceramide and sphingolipid recycling and degradation (yeast)
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PWY-7119
ceramide degradation by alpha-oxidation
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PWY66-388
chitin biosynthesis
-
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PWY-6981
coumarin biosynthesis (via 2-coumarate)
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PWY-5176
cytosolic NADPH production (yeast)
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PWY-7268
D-galactose degradation I (Leloir pathway)
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-
PWY-6317
D-sorbitol biosynthesis I
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PWY-5054
D-xylose degradation I
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-
XYLCAT-PWY
degradation of aromatic, nitrogen containing compounds
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-
di-homo-gamma-linolenate metabolites biosynthesis
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PWY-8396
diethylphosphate degradation
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PWY-5491
dissimilatory sulfate reduction I (to hydrogen sufide))
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DISSULFRED-PWY
divinyl ether biosynthesis II
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PWY-5409
dopamine degradation
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PWY6666-2
dTDP-beta-L-rhamnose biosynthesis
-
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DTDPRHAMSYN-PWY
dZTP biosynthesis
-
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PWY-8289
Entner-Doudoroff pathway I
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-
PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ethanol degradation I
-
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
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PWY66-21
ethanol degradation III
-
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PWY66-161
ethanol degradation IV
-
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PWY66-162
ethanolamine utilization
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PWY0-1477
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis IV (engineered)
-
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PWY-7126
ethene biosynthesis V (engineered)
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PWY-7124
fatty acid alpha-oxidation I (plants)
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PWY-2501
firefly bioluminescence
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PWY-7913
formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
formaldehyde oxidation I
-
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RUMP-PWY
galloylated catechin biosynthesis
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PWY-7448
GDP-alpha-D-glucose biosynthesis
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PWY-5661
GDP-mannose biosynthesis
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PWY-5659
gliotoxin biosynthesis
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PWY-7533
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
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PWY-6142
gluconeogenesis III
-
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PWY66-399
glucose and glucose-1-phosphate degradation
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-
GLUCOSE1PMETAB-PWY
glucosylglycerol biosynthesis
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PWY-7902
glutathione-mediated detoxification I
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-
PWY-4061
glutathione-mediated detoxification II
-
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PWY-6842
glycerol degradation to butanol
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PWY-7003
glycogen biosynthesis I (from ADP-D-Glucose)
-
-
GLYCOGENSYNTH-PWY
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
PWY-7900
glycogen degradation I
-
-
GLYCOCAT-PWY
glycogen degradation II
-
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PWY-5941
glycolysis I (from glucose 6-phosphate)
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-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
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P341-PWY
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
glyphosate degradation III
-
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PWY-7807
heterolactic fermentation
-
-
P122-PWY
histamine degradation
-
-
PWY-6181
hypotaurine degradation
-
-
PWY-7387
icosapentaenoate metabolites biosynthesis
-
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PWY-8399
incomplete reductive TCA cycle
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P42-PWY
indole glucosinolate activation (intact plant cell)
-
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PWYQT-4477
inulin degradation
-
-
PWY-8314
jasmonic acid biosynthesis
-
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PWY-735
L-alanine biosynthesis II
-
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ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
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-
ALACAT2-PWY
L-alanine degradation III
-
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ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
-
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P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-histidine degradation V
-
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PWY-5031
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
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PWY-5076
L-methionine degradation III
-
-
PWY-5082
L-phenylalanine degradation III
-
-
PWY-5079
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
PWY-6307
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
-
-
PWY-5057
limonene degradation IV (anaerobic)
-
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PWY-8029
linamarin degradation
-
-
PWY-3121
linoleate metabolites biosynthesis
-
-
PWY-8395
linustatin bioactivation
-
-
PWY-7091
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
lotaustralin degradation
-
-
PWY-6002
malate/L-aspartate shuttle pathway
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-
MALATE-ASPARTATE-SHUTTLE-PWY
methanol oxidation to formaldehyde IV
-
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PWY-5506
methyl indole-3-acetate interconversion
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PWY-6303
methylaspartate cycle
methylerythritol phosphate pathway I
-
-
NONMEVIPP-PWY
methylerythritol phosphate pathway II
-
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PWY-7560
methylsalicylate degradation
-
-
PWY18C3-24
mitochondrial NADPH production (yeast)
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PWY-7269
mixed acid fermentation
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FERMENTATION-PWY
neolinustatin bioactivation
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PWY-7092
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
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PWY-6748
nitric oxide biosynthesis II (mammals)
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PWY-4983
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
nitrogen remobilization from senescing leaves
-
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PWY-6549
nocardicin A biosynthesis
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PWY-7797
noradrenaline and adrenaline degradation
-
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PWY-6342
nucleoside and nucleotide degradation (archaea)
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PWY-5532
octane oxidation
partial TCA cycle (obligate autotrophs)
-
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PWY-5913
pentachlorophenol degradation
-
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PCPDEG-PWY
pentagalloylglucose biosynthesis
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PWY-5475
pentose phosphate pathway (non-oxidative branch) II
-
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PWY-8178
pentose phosphate pathway (oxidative branch) I
-
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OXIDATIVEPENT-PWY
phenylethanol biosynthesis
-
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PWY-5751
phenylpropanoid biosynthesis
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PWY-361
phosphate acquisition
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PWY-6348
photosynthesis light reactions
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PWY-101
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
-
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PWY-7218
phytol degradation
-
-
PWY66-389
protective electron sinks in the thylakoid membrane (PSII to PTOX)
-
-
PWY1YI0-7
putrescine degradation III
-
-
PWY-0
pyrimidine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7184
pyrimidine deoxyribonucleotides de novo biosynthesis II
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-
PWY-7187
pyrimidine deoxyribonucleotides de novo biosynthesis III
-
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PWY-6545
pyrimidine deoxyribonucleotides dephosphorylation
-
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PWY-7206
pyruvate fermentation to (S)-lactate
-
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PWY-5481
pyruvate fermentation to acetate VIII
-
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PWY-5768
pyruvate fermentation to acetoin III
-
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PWY3O-440
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
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PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
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PWY-7111
pyruvate fermentation to propanoate I
-
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P108-PWY
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
Rubisco shunt
-
-
PWY-5723
salidroside biosynthesis
-
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PWY-6802
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
serotonin degradation
-
-
PWY-6313
sphingosine and sphingosine-1-phosphate metabolism
-
-
PWY3DJ-11470
starch biosynthesis
-
-
PWY-622
starch degradation I
-
-
PWY-842
starch degradation III
-
-
PWY-6731
starch degradation V
-
-
PWY-6737
sterol:steryl ester interconversion (yeast)
-
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PWY-7424
streptomycin biosynthesis
-
-
PWY-5940
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
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PWY-7347
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation IV (sucrose phosphorylase)
-
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PWY-5384
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sulfite oxidation II
-
-
PWY-5279
sulfite oxidation III
-
-
PWY-5278
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
-
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GLYCOLYSIS-E-D
superpathway of glyoxylate cycle and fatty acid degradation
-
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PWY-561
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of photosynthetic hydrogen production
-
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PWY-7731
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
-
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PWY0-166
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
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PWY-6969
TCA cycle VI (Helicobacter)
-
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REDCITCYC
TCA cycle VII (acetate-producers)
-
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PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
trehalose degradation I (low osmolarity)
-
-
TREDEGLOW-PWY
trehalose degradation II (cytosolic)
-
-
PWY0-1182
trehalose degradation IV
-
-
PWY-2722
trehalose degradation V
-
-
PWY-2723
tunicamycin biosynthesis
-
-
PWY-7821
UDP-alpha-D-glucose biosynthesis
-
-
PWY-7343
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
vitamin K-epoxide cycle
methylaspartate cycle
-
-
PWY-6728
octane oxidation
-
-
P221-PWY
vitamin K-epoxide cycle
-
-
PWY-7999
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ORGANISM
COMMENTARY 
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Quercus rubra)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2026.1 (March 2026)
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