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Information on Organism Oryza coarctata

TaxTree of Organism Oryza coarctata
Condensed Tree View
Eukaryota can be found in Brenda BRENDA pathways(superkingdom)
Streptophytina can be found in Brenda (subphylum)
Petrosaviidae can be found in Brenda (subclass)
Poales can be found in Brenda BRENDA pathways(order)
Poaceae can be found in Brenda BRENDA pathways(family)
Oryzoideae can be found in Brenda BRENDA pathways(subfamily)
Oryzeae can be found in Brenda BRENDA pathways(tribe)
Oryzinae can be found in Brenda (subtribe)
Oryza can be found in Brenda BRENDA pathways(genus)
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EC NUMBER
COMMENTARY hide
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(R)-cysteate degradation
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-
PWY-6642
(S)-propane-1,2-diol degradation
-
-
PWY-7013
(S)-reticuline biosynthesis I
-
-
PWY-3581
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
-
-
PWY-4661
1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)
-
-
PWY-6372
3-(4-hydroxyphenyl)pyruvate biosynthesis
-
-
PWY-5886
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
4-hydroxybenzoate biosynthesis I (eukaryotes)
-
-
PWY-5754
acetaldehyde biosynthesis I
-
-
PWY-6333
acetylene degradation (anaerobic)
-
-
P161-PWY
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
Alanine, aspartate and glutamate metabolism
-
-
alpha-Linolenic acid metabolism
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-
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
Arginine and proline metabolism
-
-
Arginine biosynthesis
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-
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
Ascorbate and aldarate metabolism
-
-
aspartate and asparagine metabolism
-
-
atromentin biosynthesis
-
-
PWY-7518
Biosynthesis of secondary metabolites
-
-
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C4 and CAM-carbon fixation
-
-
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
Carbon fixation in photosynthetic organisms
-
-
Chloroalkane and chloroalkene degradation
-
-
coenzyme M biosynthesis
-
-
coenzyme M biosynthesis II
-
-
PWY-6643
Cysteine and methionine metabolism
-
-
cysteine metabolism
-
-
di-myo-inositol phosphate biosynthesis
-
-
PWY-6664
Diterpenoid biosynthesis
-
-
Drug metabolism - cytochrome P450
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-
ent-kaurene biosynthesis I
-
-
PWY-5032
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation IV
-
-
PWY66-162
ethanol fermentation
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-
ethanolamine utilization
-
-
PWY0-1477
Fatty acid degradation
-
-
Fe(II) oxidation
-
-
PWY-6692
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
Fructose and mannose metabolism
-
-
gluconeogenesis
-
-
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis III
-
-
PWY66-399
glutamate and glutamine metabolism
-
-
Glycine, serine and threonine metabolism
-
-
glycolysis
-
-
Glycolysis / Gluconeogenesis
-
-
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
Glyoxylate and dicarboxylate metabolism
-
-
heterolactic fermentation
-
-
P122-PWY
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis VI (bacteria)
-
-
TRPIAACAT-PWY
Inositol phosphate metabolism
-
-
Isoquinoline alkaloid biosynthesis
-
-
L-asparagine degradation III (mammalian)
-
-
ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
-
-
ASPARTATESYN-PWY
L-aspartate degradation I
-
-
ASPARTATE-DEG1-PWY
L-glutamate degradation II
-
-
GLUTDEG-PWY
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-methionine degradation III
-
-
PWY-5082
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine degradation II (anaerobic)
-
-
ANAPHENOXI-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
-
-
PWY-8014
L-tryptophan degradation IV (via indole-3-lactate)
-
-
TRPKYNCAT-PWY
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation VIII (to tryptophol)
-
-
PWY-5081
L-tryptophan degradation XIII (reductive Stickland reaction)
-
-
PWY-8017
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine degradation I
-
-
TYRFUMCAT-PWY
L-tyrosine degradation II
-
-
PWY-5151
L-tyrosine degradation III
-
-
PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
-
-
PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
-
-
PWY-8016
L-valine degradation II
-
-
PWY-5057
leucine metabolism
-
-
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
Metabolic pathways
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methionine metabolism
-
-
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
-
FERMENTATION-PWY
mycothiol biosynthesis
-
-
PWY1G-0
myo-inositol biosynthesis
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
Naphthalene degradation
-
-
non-pathway related
-
-
noradrenaline and adrenaline degradation
-
-
PWY-6342
Novobiocin biosynthesis
-
-
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
Oxidative phosphorylation
-
-
oxidative phosphorylation
-
-
Pentose phosphate pathway
-
-
pentose phosphate pathway
-
-
Phenylalanine metabolism
-
-
phenylalanine metabolism
-
-
Phenylalanine, tyrosine and tryptophan biosynthesis
-
-
phenylethanol biosynthesis
-
-
PWY-5751
phosphatidylinositol biosynthesis I (bacteria)
-
-
PWY-6580
photosynthesis
-
-
phytol degradation
-
-
PWY66-389
pinitol biosynthesis I
-
-
PWY-6738
propanol degradation
-
-
purine metabolism
-
-
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
Pyruvate metabolism
-
-
reactive oxygen species degradation
-
-
DETOX1-PWY-1
Retinol metabolism
-
-
rosmarinic acid biosynthesis I
-
-
PWY-5048
Rubisco shunt
-
-
PWY-5723
salidroside biosynthesis
-
-
PWY-6802
serotonin degradation
-
-
PWY-6313
serotonin metabolism
-
-
Streptomycin biosynthesis
-
-
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sulfolactate degradation III
-
-
PWY-6638
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
TCA cycle VIII (Chlamydia)
-
-
TCA-1
Tropane, piperidine and pyridine alkaloid biosynthesis
-
-
Tryptophan metabolism
-
-
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
valine metabolism
-
-
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
abiotic stress treatment
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Oryza coarctata)