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Information on Organism Oncorhynchus tshawytscha

Synonyms:
Chinook salmon; king salmon; Oncorhynchus tschawytscha; Oncorhynchus tshawytscha; Oncorhynchus tshawytscha (Walbaum, 1792); Salmo tshawytscha; Salmo tshawytscha Walbaum, 1792; Oncorhynchus tshawytsha;
TaxTree of Organism Oncorhynchus tshawytscha
Condensed Tree View
cellular organisms
Eukaryota can be found in Brenda BRENDA pathways(superkingdom)
Opisthokonta can be found in Brenda BRENDA pathways(clade)
Metazoa can be found in Brenda BRENDA pathways(kingdom)
Eumetazoa can be found in Brenda BRENDA pathways(clade)
Bilateria can be found in Brenda BRENDA pathways(clade)
Deuterostomia can be found in Brenda BRENDA pathways(clade)
Chordata can be found in Brenda BRENDA pathways(phylum)
Craniata can be found in Brenda (subphylum)
Vertebrata can be found in Brenda BRENDA pathways(clade)
Gnathostomata can be found in Brenda BRENDA pathways(clade)
Teleostomi can be found in Brenda (clade)
Euteleostomi can be found in Brenda BRENDA pathways(clade)
Actinopterygii can be found in Brenda BRENDA pathways(superclass)
Actinopteri can be found in Brenda (class)
Neopterygii can be found in Brenda BRENDA pathways(subclass)
Teleostei can be found in Brenda BRENDA pathways(infraclass)
Osteoglossocephalai can be found in Brenda (clade)
Clupeocephala can be found in Brenda BRENDA pathways
Euteleosteomorpha can be found in Brenda (cohort)
Protacanthopterygii can be found in Brenda (clade)
Salmoniformes can be found in Brenda BRENDA pathways(order)
Salmonidae can be found in Brenda BRENDA pathways(family)
Salmoninae can be found in Brenda (subfamily)
Oncorhynchus can be found in Brenda BRENDA pathways(genus)
Oncorhynchus tshawytscha can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(aminomethyl)phosphonate degradation
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PWY-7805
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-reticuline biosynthesis
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-
(S)-reticuline biosynthesis I
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-
PWY-3581
1,3-propanediol biosynthesis (engineered)
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PWY-7385
1,5-anhydrofructose degradation
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PWY-6992
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
3-hydroxypropanoate cycle
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-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
4-aminobutanoate degradation V
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-
PWY-5022
4-hydroxy-2-nonenal detoxification
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-
PWY-7112
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acetyl-CoA biosynthesis from citrate
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PWY-5172
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alanine metabolism
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-
Alanine, aspartate and glutamate metabolism
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Amaryllidacea alkaloids biosynthesis
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PWY-7826
Amino sugar and nucleotide sugar metabolism
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-
Aminobenzoate degradation
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-
ammonia assimilation cycle III
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AMMASSIM-PWY
ammonia oxidation II (anaerobic)
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P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
androgen and estrogen metabolism
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-
Arachidonic acid metabolism
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arachidonic acid metabolism
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-
Arginine and proline metabolism
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-
Arginine biosynthesis
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arsenate detoxification I
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PWY-8264
arsenite to oxygen electron transfer
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-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Ascorbate and aldarate metabolism
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astaxanthin biosynthesis (bacteria, fungi, algae)
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PWY-5288
bacterial bioluminescence
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PWY-7723
base-degraded thiamine salvage
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PWY-6899
Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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-
bryostatin biosynthesis
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PWY-8047
bupropion degradation
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-
PWY66-241
C4 and CAM-carbon fixation
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-
C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
Caffeine metabolism
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camalexin biosynthesis
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CAMALEXIN-SYN
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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-
Carotenoid biosynthesis
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carotenoid biosynthesis
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chitin degradation I (archaea)
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PWY-6855
chitin degradation II (Vibrio)
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PWY-6902
chitin degradation III (Serratia)
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PWY-7822
chlorogenic acid degradation
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PWY-6781
Citrate cycle (TCA cycle)
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-
citric acid cycle
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CO2 fixation into oxaloacetate (anaplerotic)
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PWYQT-4429
creatine phosphate biosynthesis
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PWY-6158
cyanate degradation
Cysteine and methionine metabolism
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cytosolic NADPH production (yeast)
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PWY-7268
D-Amino acid metabolism
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denitrification
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Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ethanol degradation IV
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PWY66-162
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis IV (engineered)
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PWY-7126
Fatty acid biosynthesis
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fatty acid biosynthesis initiation (mitochondria)
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PWY66-429
fatty acid biosynthesis initiation (plant mitochondria)
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PWY-6799
fatty acid biosynthesis initiation (type II)
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PWY-4381
Fatty acid degradation
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-
Fe(II) oxidation
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PWY-6692
flexixanthin biosynthesis
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PWY-7947
formaldehyde oxidation I
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RUMP-PWY
Fructose and mannose metabolism
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-
GABA shunt I
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GLUDEG-I-PWY
Galactose metabolism
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-
GDP-alpha-D-glucose biosynthesis
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PWY-5661
gliotoxin biosynthesis
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PWY-7533
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
glucose and glucose-1-phosphate degradation
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GLUCOSE1PMETAB-PWY
glutamate and glutamine metabolism
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glutaminyl-tRNAgln biosynthesis via transamidation
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PWY-5921
Glutathione metabolism
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-
glutathione metabolism
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glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glutathione-peroxide redox reactions
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PWY-4081
glycerol degradation to butanol
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PWY-7003
Glycerolipid metabolism
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-
Glycerophospholipid metabolism
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Glycine, serine and threonine metabolism
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-
glycogen degradation I
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-
GLYCOCAT-PWY
glycogen degradation II
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PWY-5941
glycogen metabolism
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-
glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glycosaminoglycan degradation
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-
Glycosphingolipid biosynthesis - ganglio series
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-
Glyoxylate and dicarboxylate metabolism
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-
glyoxylate assimilation
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PWY-5744
glyoxylate cycle
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GLYOXYLATE-BYPASS
glyphosate degradation III
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-
PWY-7807
heme degradation I
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-
PWY-5874
heterolactic fermentation
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-
P122-PWY
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
Isoquinoline alkaloid biosynthesis
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-
L-alanine biosynthesis II
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ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
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-
ALACAT2-PWY
L-alanine degradation III
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ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-asparagine biosynthesis III (tRNA-dependent)
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PWY490-4
L-citrulline biosynthesis
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CITRULBIO-PWY
L-glutamate biosynthesis I
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-
GLUTSYN-PWY
L-glutamate biosynthesis II
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GLUTAMATE-SYN2-PWY
L-glutamate degradation I
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-
GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
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-
P162-PWY
L-glutamate degradation X
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PWY-5766
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-glutamine degradation I
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GLUTAMINDEG-PWY
L-histidine degradation V
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-
PWY-5031
L-lactaldehyde degradation
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-
L-ornithine biosynthesis II
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-
ARGININE-SYN4-PWY
L-serine biosynthesis I
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-
SERSYN-PWY
lactate fermentation
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-
Linoleic acid metabolism
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-
lipid metabolism
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-
melatonin degradation I
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-
PWY-6398
Metabolic pathways
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-
metabolism of disaccharids
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-
Metabolism of xenobiotics by cytochrome P450
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-
Methane metabolism
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-
methanol oxidation to formaldehyde IV
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PWY-5506
methyl indole-3-acetate interconversion
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-
PWY-6303
methylaspartate cycle
methylsalicylate degradation
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-
PWY18C3-24
Microbial metabolism in diverse environments
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-
mixed acid fermentation
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-
FERMENTATION-PWY
mupirocin biosynthesis
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-
PWY-8012
mycobactin biosynthesis
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-
PWY185E-1
NAD phosphorylation and dephosphorylation
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-
NADPHOS-DEPHOS-PWY
NAD salvage pathway III (to nicotinamide riboside)
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NAD-BIOSYNTHESIS-II
NAD(P)/NADPH interconversion
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-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
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-
PWY0-1335
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
Neomycin, kanamycin and gentamicin biosynthesis
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-
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
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PWY-6748
nitric oxide biosynthesis II (mammals)
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PWY-4983
nitrifier denitrification
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-
PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
Nitrogen metabolism
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-
nitrogen remobilization from senescing leaves
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-
PWY-6549
nocardicin A biosynthesis
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-
PWY-7797
non-pathway related
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-
o-diquinones biosynthesis
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-
PWY-6752
oleandomycin activation/inactivation
-
-
PWY-6972
Other glycan degradation
-
-
Oxidative phosphorylation
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oxidative phosphorylation
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-
pederin biosynthesis
-
-
PWY-8049
pentachlorophenol degradation
-
-
PCPDEG-PWY
Pentose and glucuronate interconversions
-
-
Pentose phosphate pathway
-
-
pentose phosphate pathway
-
-
pentose phosphate pathway (oxidative branch) I
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-
OXIDATIVEPENT-PWY
photosynthesis
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-
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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-
PWY-7218
Polycyclic aromatic hydrocarbon degradation
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Porphyrin and chlorophyll metabolism
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-
Propanoate metabolism
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-
Purine metabolism
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-
purine metabolism
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-
pyrimidine deoxyribonucleosides salvage
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-
PWY-7199
Pyrimidine metabolism
-
-
pyrimidine metabolism
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-
pyruvate fermentation to (R)-lactate
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PWY-8274
pyruvate fermentation to (S)-lactate
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-
PWY-5481
Pyruvate metabolism
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-
reactive oxygen species degradation
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-
DETOX1-PWY-1
reductive TCA cycle I
-
-
P23-PWY
retinol biosynthesis
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-
PWY-6857
Retinol metabolism
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-
Rubisco shunt
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PWY-5723
saponin biosynthesis II
-
-
PWY-5756
serine metabolism
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-
serotonin and melatonin biosynthesis
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-
PWY-6030
serotonin degradation
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-
PWY-6313
serotonin metabolism
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-
Sphingolipid metabolism
-
-
Starch and sucrose metabolism
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-
starch degradation III
-
-
PWY-6731
starch degradation V
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-
PWY-6737
Steroid hormone biosynthesis
-
-
Streptomycin biosynthesis
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-
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
sucrose biosynthesis II
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-
PWY-7238
sucrose degradation III (sucrose invertase)
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-
PWY-621
superoxide radicals degradation
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-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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-
PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
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-
GLYCOLYSIS-E-D
superpathway of methylsalicylate metabolism
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PWY18C3-25
Taurine and hypotaurine metabolism
-
-
TCA cycle II (plants and fungi)
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-
PWY-5690
TCA cycle III (animals)
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-
PWY66-398
thiamine diphosphate salvage IV (yeast)
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-
PWY-7356
Thiamine metabolism
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-
thyroid hormone metabolism I (via deiodination)
-
-
PWY-6260
thyroid hormone metabolism II (via conjugation and/or degradation)
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-
PWY-6261
trehalose degradation I (low osmolarity)
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-
TREDEGLOW-PWY
trehalose degradation II (cytosolic)
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-
PWY0-1182
trehalose degradation IV
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-
PWY-2722
trehalose degradation V
-
-
PWY-2723
triacylglycerol degradation
-
-
LIPAS-PWY
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
Tyrosine metabolism
-
-
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
vancomycin resistance I
-
-
PWY-6454
vanillin biosynthesis I
-
-
PWY-5665
vitamin B1 metabolism
-
-
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
top print hide
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
top print hide
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
pyloric ceca
Manually annotated by BRENDA team
-
dorsal portion
Manually annotated by BRENDA team
top print hide
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Oncorhynchus tshawytscha)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA