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Information on Organism Methylarcula marina

Synonyms:
CCUG 72982; Methylarcula marina Doronina et al. 2000; Methylarcula marina; "Paracoccus methylarcula" Doronina et al. 2020; Paracoccus methylarcula; strain p; VKM B-2159; Methyloarcula marina; strain h1T;
TaxTree of Organism Methylarcula marina
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Alphaproteobacteria can be found in Brenda BRENDA pathways(class)
Rhodobacterales can be found in Brenda BRENDA pathways(order)
Rhodobacteraceae can be found in Brenda BRENDA pathways(family)
Methylarcula can be found in Brenda (genus)
Methylarcula marina can be found in Brenda BRENDA pathways(species)
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EC NUMBER
COMMENTARY hide
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
2'-deoxymugineic acid phytosiderophore biosynthesis
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PWY-5912
2-arachidonoylglycerol biosynthesis
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PWY-8052
2-nitrotoluene degradation
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PWY-5641
3-dehydroquinate biosynthesis II (archaea)
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PWY-6160
acetyl CoA biosynthesis
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adenosine ribonucleotides de novo biosynthesis
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PWY-7219
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
aerobic toluene degradation
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Amino sugar and nucleotide sugar metabolism
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anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
Arginine and proline metabolism
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Arginine biosynthesis
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arginine metabolism
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bacilysin biosynthesis
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PWY-7626
bacterial bioluminescence
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PWY-7723
baumannoferrin biosynthesis
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PWY-7988
Benzoate degradation
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beta-Alanine metabolism
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Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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Biosynthesis of siderophore group nonribosomal peptides
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Butanoate metabolism
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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PWY-5419
Chlorocyclohexane and chlorobenzene degradation
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chlorosalicylate degradation
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PWY-6107
cichoriin interconversion
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PWY-7057
Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation into oxaloacetate (anaplerotic)
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PWYQT-4429
cremeomycin biosynthesis
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PWY-8296
Cysteine and methionine metabolism
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cysteine metabolism
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d-xylose degradation
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D-xylose degradation I
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XYLCAT-PWY
daphnin interconversion
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PWY-7056
Dioxin degradation
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dipicolinate biosynthesis
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PWY-8088
Drug metabolism - other enzymes
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ectoine biosynthesis
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P101-PWY
ectoine degradation
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PWY-7855
Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ethanol degradation IV
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PWY66-162
ethene biosynthesis V (engineered)
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PWY-7124
Ether lipid metabolism
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formaldehyde assimilation I (serine pathway)
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PWY-1622
fructan degradation
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PWY-862
Fructose and mannose metabolism
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Galactose metabolism
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gluconeogenesis
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gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
glycerol degradation to butanol
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PWY-7003
Glycerolipid metabolism
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Glycerophospholipid metabolism
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Glycine, serine and threonine metabolism
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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GLYOXYLATE-BYPASS
gossypol biosynthesis
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PWY-5773
grixazone biosynthesis
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PWY-7153
heterolactic fermentation
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P122-PWY
homocysteine and cysteine interconversion
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PWY-801
hydrogen sulfide biosynthesis II (mammalian)
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PWY66-426
Inositol phosphate metabolism
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justicidin B biosynthesis
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PWY-6824
L-arginine biosynthesis II (acetyl cycle)
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ARGSYNBSUB-PWY
L-arginine degradation V (arginine deiminase pathway)
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ARGDEGRAD-PWY
L-arginine degradation XIII (reductive Stickland reaction)
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PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
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PWY-6344
L-cysteine biosynthesis III (from L-homocysteine)
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HOMOCYSDEGR-PWY
L-homoserine biosynthesis
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HOMOSERSYN-PWY
L-lysine biosynthesis I
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DAPLYSINESYN-PWY
L-lysine biosynthesis II
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PWY-2941
L-lysine biosynthesis III
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PWY-2942
L-lysine biosynthesis VI
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PWY-5097
L-lysine degradation IV
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PWY-5280
L-methionine biosynthesis IV
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PWY-7977
L-nicotianamine biosynthesis
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PWY-5957
L-phenylalanine biosynthesis I
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PHESYN
L-phenylalanine biosynthesis II
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PWY-3462
L-phenylalanine degradation IV (mammalian, via side chain)
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PWY-6318
L-tyrosine biosynthesis I
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TYRSYN
L-tyrosine biosynthesis II
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PWY-3461
L-tyrosine biosynthesis III
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PWY-6120
L-tyrosine degradation I
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TYRFUMCAT-PWY
lipid metabolism
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Lysine biosynthesis
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Lysine degradation
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lysine metabolism
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manganese oxidation I
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PWY-6591
Mannose type O-glycan biosynthesis
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matairesinol biosynthesis
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PWY-5466
Metabolic pathways
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metabolism of amino sugars and derivatives
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metabolism of disaccharids
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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Methanobacterium thermoautotrophicum biosynthetic metabolism
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PWY-6146
methanol oxidation to formaldehyde IV
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PWY-5506
methionine metabolism
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methyl indole-3-acetate interconversion
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PWY-6303
methylaspartate cycle
methylsalicylate degradation
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PWY-6184, PWY18C3-24
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
Monobactam biosynthesis
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N-acetylneuraminate and N-acetylmannosamine degradation I
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PWY0-1324
N-acetylneuraminate and N-acetylmannosamine degradation II
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PWY-7581
Naphthalene degradation
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nitric oxide biosynthesis II (mammals)
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PWY-4983
nitrogen remobilization from senescing leaves
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PWY-6549
nocardicin A biosynthesis
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PWY-7797
non-pathway related
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norspermidine biosynthesis
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PWY-6562
Other glycan degradation
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Other types of O-glycan biosynthesis
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oxidative decarboxylation of pyruvate
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Oxidative phosphorylation
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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partial TCA cycle (obligate autotrophs)
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PWY-5913
Pentose and glucuronate interconversions
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phenol degradation
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Phenylalanine metabolism
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phenylalanine metabolism
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Phenylalanine, tyrosine and tryptophan biosynthesis
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phospholipases
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LIPASYN-PWY
phosphopantothenate biosynthesis I
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PANTO-PWY
photosynthesis
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photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
plasmalogen biosynthesis I (aerobic)
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PWY-7782
plasmalogen degradation
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PWY-7783
plastoquinol-9 biosynthesis I
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PWY-1581
platensimycin biosynthesis
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PWY-8179
Polycyclic aromatic hydrocarbon degradation
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polyhydroxybutanoate biosynthesis
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PWY1-3
polyhydroxydecanoate biosynthesis
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PWY-6657
polyphosphate metabolism
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PWY-8138
protein O-mannosylation I (yeast)
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PWY-7921
protein O-mannosylation II (mammals, core M1 and core M2)
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PWY-7922
protein O-mannosylation III (mammals, core M3)
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PWY-7979
Purine metabolism
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purine metabolism
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pyoverdine I biosynthesis
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PWY-6409
pyruvate decarboxylation to acetyl CoA I
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PYRUVDEHYD-PWY
Pyruvate metabolism
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reactive oxygen species degradation
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DETOX1-PWY-1
retinol biosynthesis
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PWY-6857
rhizobactin 1021 biosynthesis
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PWY-761
Rubisco shunt
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PWY-5723
saframycin A biosynthesis
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PWY-7671
salicylate degradation I
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PWY-6183
salinosporamide A biosynthesis
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PWY-6627
sesamin biosynthesis
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PWY-5469
spermidine biosynthesis II
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PWY-6559
Sphingolipid metabolism
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Starch and sucrose metabolism
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starch degradation
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starch degradation III
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PWY-6731
starch degradation IV
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PWY-6735
Styrene degradation
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superoxide radicals degradation
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DETOX1-PWY
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of methylsalicylate metabolism
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PWY18C3-25
taurine biosynthesis III
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PWY-8359
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
Thiamine metabolism
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threonine metabolism
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toluene degradation II (aerobic) (via 4-methylcatechol)
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TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
triacylglycerol degradation
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LIPAS-PWY
Tryptophan metabolism
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Tyrosine metabolism
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tyrosine metabolism
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Ubiquinone and other terpenoid-quinone biosynthesis
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vitamin E biosynthesis (tocopherols)
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PWY-1422
Xylene degradation
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xyloglucan degradation II (exoglucanase)
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PWY-6807
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
gene ectC
UniProt
Manually annotated by BRENDA team
top
LINKS TO OTHER DATABASES (specific for Methylarcula marina)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA