Any feedback?
Please rate this page
(organism.php)
(0/150)

BRENDA support

Information on Organism Geobacter sp.

Synonyms:
Geobacter sp.; Geobacter species;
Word Map for Organism Geobacter sp.
TaxTree of Organism Geobacter sp.
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
delta/epsilon subdivisions can be found in Brenda (subphylum)
Deltaproteobacteria can be found in Brenda BRENDA pathways(class)
Desulfuromonadales can be found in Brenda BRENDA pathways(order)
Geobacteraceae can be found in Brenda BRENDA pathways(family)
Geobacter can be found in Brenda BRENDA pathways(genus)
unclassified Geobacter can be found in Brenda
Geobacter sp. can be found in Brenda BRENDA pathways(species)
Please wait a moment until all data is loaded. This message will disappear when all data is loaded.
top print hide
EC NUMBER
COMMENTARY hide
top print hide
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
4-aminobutanoate degradation V
-
-
PWY-5022
acetate fermentation
-
-
adipate biosynthesis
-
-
PWY-8347
adipate degradation
-
-
PWY-8354
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
alanine metabolism
-
-
Alanine, aspartate and glutamate metabolism
-
-
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
Arginine biosynthesis
-
-
arsenate detoxification I
-
-
PWY-8264
arsenate detoxification III
-
-
PWY-8263
arsenate reduction (respiratory)
-
-
PWY-4601
arsenic detoxification (plants)
-
-
PWY-8259
arsenic detoxification (yeast)
-
-
PWY-4621
arsonoacetate degradation
-
-
P482-PWY
assimilatory sulfate reduction I
-
-
SO4ASSIM-PWY
assimilatory sulfate reduction III
-
-
PWY-6683
ATP biosynthesis
-
-
PWY-7980
Benzoate degradation
-
-
benzoyl-CoA degradation
-
-
beta-Alanine metabolism
-
-
Bifidobacterium shunt
-
-
P124-PWY
Biosynthesis of secondary metabolites
-
-
Butanoate metabolism
-
-
C5-Branched dibasic acid metabolism
-
-
Carbon fixation pathways in prokaryotes
-
-
Chloroalkane and chloroalkene degradation
-
-
Citrate cycle (TCA cycle)
-
-
citric acid cycle
-
-
Cysteine and methionine metabolism
-
-
Entner-Doudoroff pathway II (non-phosphorylative)
-
-
NPGLUCAT-PWY
ethanol degradation IV
-
-
PWY66-162
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis IV (engineered)
-
-
PWY-7126
ethene biosynthesis V (engineered)
-
-
PWY-7124
Fe(II) oxidation
-
-
PWY-6692
formate oxidation to CO2
-
-
PWY-1881
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
glutamate and glutamine metabolism
-
-
Glycolysis / Gluconeogenesis
-
-
Glyoxylate and dicarboxylate metabolism
-
-
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
heterolactic fermentation
-
-
P122-PWY
hydrogen oxidation I (aerobic)
-
-
P283-PWY
hydrogen production
-
-
incomplete reductive TCA cycle
-
-
P42-PWY
iron reduction and absorption
-
-
PWY-5934
isoprenoid biosynthesis
-
-
isopropanol biosynthesis (engineered)
-
-
PWY-6876
itaconate degradation
-
-
PWY-5749
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation V (oxidative Stickland reaction)
-
-
PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
L-glutamate degradation VII (to butanoate)
-
-
GLUDEG-II-PWY
L-glutamate degradation XI (reductive Stickland reaction)
-
-
PWY-8190
L-histidine degradation V
-
-
PWY-5031
L-lactaldehyde degradation
-
-
lactate fermentation
-
-
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
-
-
PWY-8377
lipid metabolism
-
-
Metabolic pathways
-
-
Methane metabolism
-
-
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methionine metabolism
-
-
methylaspartate cycle
methylerythritol phosphate pathway I
-
-
NONMEVIPP-PWY
methylerythritol phosphate pathway II
-
-
PWY-7560
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
-
FERMENTATION-PWY
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
nitrate assimilation
-
-
nitrogen fixation I (ferredoxin)
-
-
N2FIX-PWY
Nitrogen metabolism
-
-
nitrogen remobilization from senescing leaves
-
-
PWY-6549
Nitrotoluene degradation
-
-
non-pathway related
-
-
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
Oxidative phosphorylation
-
-
oxidative phosphorylation
-
-
Pantothenate and CoA biosynthesis
-
-
pantothenate biosynthesis
-
-
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
Photosynthesis
-
-
Propanoate metabolism
-
-
Purine metabolism
-
-
purine metabolism
-
-
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
pyruvate decarboxylation to acetyl CoA III
-
-
PWY-8275
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to acetate I
-
-
P142-PWY
pyruvate fermentation to acetate III
-
-
PWY-5483
pyruvate fermentation to acetate V
-
-
PWY-5537
pyruvate fermentation to acetate VI
-
-
PWY-5538
pyruvate fermentation to acetate VII
-
-
PWY-5600
pyruvate fermentation to acetone
-
-
PWY-6588
pyruvate fermentation to butanoate
-
-
CENTFERM-PWY
pyruvate fermentation to butanol I
-
-
PWY-6583
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to hexanol (engineered)
-
-
PWY-6863
Pyruvate metabolism
-
-
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive acetyl coenzyme A pathway
-
-
reductive glycine pathway of autotrophic CO2 fixation
-
-
PWY-8303
reductive monocarboxylic acid cycle
-
-
PWY-5493
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
sulfate reduction
-
-
sulfide oxidation IV (mitochondria)
-
-
PWY-7927
Sulfur metabolism
-
-
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
Taurine and hypotaurine metabolism
-
-
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
Terpenoid backbone biosynthesis
-
-
tetrachloroethene degradation
-
-
PCEDEG-PWY
thiosulfate disproportionation IV (rhodanese)
-
-
PWY-5350
Toluene degradation
-
-
toluene degradation
-
-
toluene degradation to benzoyl-CoA (anaerobic)
-
-
PWY-81
Tryptophan metabolism
-
-
vancomycin resistance I
-
-
PWY-6454
top print hide
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
top
LINKS TO OTHER DATABASES (specific for Geobacter sp.)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA