Literature summary for 2.3.1.304 extracted from

Sudo, M.; Hori, C.; Ooi, T.; Mizuno, S.; Tsuge, T.; Matsumoto, K.
Synergy of valine and threonine supplementation on poly(2-hydroxybutyrate-block-3-hydroxybutyrate) synthesis in engineered Escherichia coli expressing chimeric polyhydroxyalkanoate synthase (2020), J. Biosci. Bioeng., 129, 302-306 .

Search for more literature for 2.3.1.304

Cloned(Commentary)

Cloned (Comment)	Organism
gene phaC, recombinant expression of the chimeric mutant enzyme PhaCAR in Escherichia coli	Cupriavidus necator
gene phaC, recombinant expression of the chimeric mutant enzyme PhaCAR in Escherichia coli	Aeromonas caviae

Protein Variants

Protein Variants	Comment	Organism
additional information	engineering of a chimeric polyhydroxyalkanoate (PHA) synthase PhaCAR is composed of N-terminal portion of Aeromonas caviae PHA synthase and C-terminal portion of Ralstonia eutropha (Cupriavidus necator) PHA synthase. PhaCAR has a unique and useful capacity to synthesize the block PHA copolymer poly(2-hydroxybutyrate-block-3-hydroxybutyrate) [P(2HB-beta-3HB)] in engineered Escherichia coli from exogenous 2HB and 3HB. Synergy of valine and threonine supplementation on poly(2-hydroxybutyrate-block-3-hydroxybutyrate) synthesis in engineered Escherichia coli expressing chimeric polyhydroxyalkanoate synthase, overview. Incorporate the amino acid-derived 2-hydroxyalkanoate (2HA) units using PhaCAR and the 2HA-CoA-supplying enzymes lactate dehydrogenase (LdhA) and CoA transferase (HadA). Cells harboring the genes for PhaCAR, LdhA, and HadA, as well as for the 3HB-CoA-supplying enzymes beta-ketothiolase and acetoacetyl-CoA reductase, are cultivated with supplementation of four hydrophobic amino acids, i.e. leucine, valine, isoleucine, and phenylalanine, in the medium. No hydrophobic amino acid-derived monomers are incorporated into the polymer, which is most likely because of the strict substrate specificity of PhaCAR, except for P(2HB-co-3HB) which is produced with Val supplementation. The copolymer is likely P(2HB-beta-3HB) based on proton nuclear magnetic resonance analysis. Dual supplementation with Thr and Val shows synergy on the 2HB fraction of the polymer. Val supplementation promotes the 2HB synthesis likely by inhibiting the metabolism of 2-oxobutyrate into Ile and/or activating Thr dehydratase. PhaCAR spontaneously synthesizes poly(2HB-block-3-hydroxybutyrate) [P(2HB-beta-3HB)] from the mixture of 2HB and 3HB supplemented in the medium. Poly(2-hydroxybutyrate-block-3-hydroxybutyrate) [P(2HA-beta-3HB)] biosynthesis pathways from threonine in engineered Escherichia coli and proposed role of valine, overview	Cupriavidus necator
additional information	engineering of a chimeric polyhydroxyalkanoate (PHA) synthase PhaCAR is composed of N-terminal portion of Aeromonas caviae PHA synthase and C-terminal portion of Ralstonia eutropha (Cupriavidus necator) PHA synthase. PhaCAR has a unique and useful capacity to synthesize the block PHA copolymer poly(2-hydroxybutyrate-block-3-hydroxybutyrate) [P(2HB-beta-3HB)] in engineered Escherichia coli from exogenous 2HB and 3HB. Synergy of valine and threonine supplementation on poly(2-hydroxybutyrate-block-3-hydroxybutyrate) synthesis in engineered Escherichia coli expressing chimeric polyhydroxyalkanoate synthase, overview. Incorporate the amino acid-derived 2-hydroxyalkanoate (2HA) units using PhaCAR and the 2HA-CoA-supplying enzymes lactate dehydrogenase (LdhA) and CoA transferase (HadA). Cells harboring the genes for PhaCAR, LdhA, and HadA, as well as for the 3HB-CoA-supplying enzymes beta-ketothiolase and acetoacetyl-CoA reductase, are cultivated with supplementation of four hydrophobic amino acids, i.e. leucine, valine, isoleucine, and phenylalanine, in the medium. No hydrophobic amino acid-derived monomers are incorporated into the polymer, which is most likely because of the strict substrate specificity of PhaCAR, except for P(2HB-co-3HB) which is produced with Val supplementation. The copolymer is likely P(2HB-beta-3HB) based on proton nuclear magnetic resonance analysis. Dual supplementation with Thr and Val shows synergy on the 2HB fraction of the polymer. Valine supplementation promotes the 2HB synthesis likely by inhibiting the metabolism of 2-oxobutyrate into Ile and/or activating Thr dehydratase. PhaCAR spontaneously synthesizes poly(2HB-block-3-hydroxybutyrate) [P(2HB-beta-3HB)] from the mixture of 2HB and 3HB supplemented in the medium. Poly(2-hydroxybutyrate-block-3-hydroxybutyrate) [P(2HA-beta-3HB)] biosynthesis pathways from threonine in engineered Escherichia coli and proposed role of valine, overview	Aeromonas caviae

Organism

Organism	UniProt	Comment	Textmining
Aeromonas caviae	O32471	-	-
Cupriavidus necator	P23608	i.e. Ralstonia eutropha	-
Cupriavidus necator ATCC 17699	P23608	i.e. Ralstonia eutropha	-
Cupriavidus necator DSM 428	P23608	i.e. Ralstonia eutropha	-
Cupriavidus necator Stanier 337	P23608	i.e. Ralstonia eutropha	-

Synonyms

Synonyms	Comment	Organism
PHA synthase	-	Cupriavidus necator
PHA synthase	-	Aeromonas caviae
PhaC	-	Cupriavidus necator
PhaC	-	Aeromonas caviae
PhaCAc	-	Aeromonas caviae
PhaCRe	-	Cupriavidus necator
polyhydroxyalkanoate synthase	-	Cupriavidus necator
polyhydroxyalkanoate synthase	-	Aeromonas caviae

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Release 2023.1 (January 2023)