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Information on EC 6.2.1.12 - 4-coumarate-CoA ligase and Organism(s) Pinus taeda and UniProt Accession P41636

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EC Tree
     6 Ligases
         6.2 Forming carbon-sulfur bonds
             6.2.1 Acid-thiol ligases
                6.2.1.12 4-coumarate-CoA ligase
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This record set is specific for:
Pinus taeda
UNIPROT: P41636 not found.
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Word Map
The taxonomic range for the selected organisms is: Pinus taeda
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Synonyms
4-coumarate:coa ligase, 4-coumarate:coenzyme a ligase, 4-coumarate-coa ligase, 4-coumarate coa ligase, 4-coumarate coenzyme a ligase, at4cl1, 4-coumaroyl-coa ligase, os4cl, pl4cl1, pl4cl2, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4-coumarate:CoA ligase
-
4CL1
isoform
4-coumarate:CoA ligase
-
4-Coumarate:coenzyme A ligase
-
-
-
-
4-coumaroyl-CoA synthase
-
-
-
-
4-Coumaryl-CoA synthetase
-
-
-
-
4CL
-
-
-
-
4CL3
isoform
Caffeolyl coenzyme A synthetase
-
-
-
-
Clone 4CL14
-
-
-
-
Clone 4CL16
-
-
-
-
Feruloyl CoA ligase
-
-
-
-
Feruloyl coenzyme A synthetase
-
-
-
-
Hydroxy-cinnamate:CoA ligase
-
-
-
-
Hydroxycinnamate:CoA ligase
-
-
-
-
Hydroxycinnamoyl CoA synthetase
-
-
-
-
p-Coumaroyl CoA ligase
-
-
-
-
p-Coumaryl coenzyme A synthetase
-
-
-
-
p-Coumaryl-CoA ligase
-
-
-
-
p-Coumaryl-CoA synthetase
-
-
-
-
p-Hydroxycinnamic acid:CoA ligase
-
-
-
-
p-Hydroxycinnamoyl coenzyme A synthetase
-
-
-
-
Sinapoyl coenzyme A snthetase
-
-
-
-
Synthetase, p-coumaroyl coenzyme A
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Acid-thiol ligation
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
4-coumarate:CoA ligase (AMP-forming)
-
CAS REGISTRY NUMBER
COMMENTARY hide
37332-51-7
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
ATP + 4-coumarate + CoA
AMP + diphosphate + 4-coumaroyl-CoA
show the reaction diagram
ATP + caffeate + CoA
AMP + diphosphate + caffeoyl-CoA
show the reaction diagram
-
-
-
?
ATP + cinnamate + CoA
AMP + diphosphate + cinnamoyl-CoA
show the reaction diagram
-
-
-
?
ATP + ferulate + CoA
AMP + diphosphate + feruloyl-CoA
show the reaction diagram
-
-
-
?
ATP + 4-coumarate + CoA
AMP + diphosphate + 4-coumaroyl-CoA
show the reaction diagram
ATP + caffeate + CoA
AMP + diphosphate + caffeoyl-CoA
show the reaction diagram
ATP + cinnamate + CoA
AMP + diphosphate + cinnamoyl-CoA
show the reaction diagram
ATP + ferulate + CoA
AMP + diphosphate + feruloyl-CoA
show the reaction diagram
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
ATP + 4-coumarate + CoA
AMP + diphosphate + 4-coumaroyl-CoA
show the reaction diagram
preferred substrate
-
-
?
ATP + 4-coumarate + CoA
AMP + diphosphate + 4-coumaroyl-CoA
show the reaction diagram
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
coniferin
-
-
naringenin
-
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0302
4-coumarate
isoform 4CL1, pH and temperature not specified in the publication
0.0296
caffeate
isoform 4CL1, pH and temperature not specified in the publication
1.0803
cinnamate
isoform 4CL1, pH and temperature not specified in the publication
0.0522
ferulate
isoform 4CL1, pH and temperature not specified in the publication
0.01097
4-coumarate
isoform 4CL3, pH and temperature not specified in the publication
0.0423
caffeate
isoform 4CL3, pH and temperature not specified in the publication
0.8875
cinnamate
isoform 4CL3, pH and temperature not specified in the publication
0.0849
ferulate
isoform 4CL3, pH and temperature not specified in the publication
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
4.15
4-coumarate
isoform 4CL1, pH and temperature not specified in the publication
1.6
caffeate
isoform 4CL1, pH and temperature not specified in the publication
5.22
cinnamate
isoform 4CL1, pH and temperature not specified in the publication
14.99
ferulate
isoform 4CL1, pH and temperature not specified in the publication
0.19
4-coumarate
isoform 4CL3, pH and temperature not specified in the publication
0.13
caffeate
isoform 4CL3, pH and temperature not specified in the publication
0.27
cinnamate
isoform 4CL3, pH and temperature not specified in the publication
0.15
ferulate
isoform 4CL3, pH and temperature not specified in the publication
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
137.3
4-coumarate
isoform 4CL1, pH and temperature not specified in the publication
54.1
caffeate
isoform 4CL1, pH and temperature not specified in the publication
4.8
cinnamate
isoform 4CL1, pH and temperature not specified in the publication
287.4
ferulate
isoform 4CL1, pH and temperature not specified in the publication
17.3
4-coumarate
isoform 4CL3, pH and temperature not specified in the publication
3.1
caffeate
isoform 4CL3, pH and temperature not specified in the publication
0.3
cinnamate
isoform 4CL3, pH and temperature not specified in the publication
1.8
ferulate
isoform 4CL3, pH and temperature not specified in the publication
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
loblolly pine
UniProt
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
highest expression in root tip
Manually annotated by BRENDA team
highest expression in root tip
Manually annotated by BRENDA team
-
differentiating
Manually annotated by BRENDA team
additional information
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
4CL_PINTA
537
0
58591
Swiss-Prot
other Location (Reliability: 2)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
64000
-
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
His-Bind purification kit
His-Bind purification kit
recombinant protein using His-tag
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli Rosetta 2 (DE3) cells
60-66% sequence identity with 4-coumarate:CoA ligase sequences from herbaceous angiosperms
-
expressed in Escherichia coli as His-tag fusion protein
-
expressed in Escherichia coli Rosetta 2 (DE3) cells
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Zhang, X.H.; Chiang, V.L.
Molecular cloning of 4-coumarate:coenzyme A ligase in loblolly pine and the roles of this enzyme in the biosynthesis of lignin in compression wood
Plant Physiol.
113
65-74
1997
Pinus taeda
Manually annotated by BRENDA team
Voo, K.S.; Whetten, R.W.; O'Malley, D.M.; Sederoff, R.R.
4-Coumarate:coenzyme A ligase from loblolly pine xylem. Isolation characterization, and complementary DNA cloning
Plant Physiol.
108
85-97
1995
Pinus taeda
Manually annotated by BRENDA team
Harding, S.A.; Leshkevich, J.; Chiang, V.L.; Tsai, C.J.
Differential substrate inhibition couples kinetically distinct 4-coumarate: coenzyme A ligases with spatially distinct metabolic roles in quaking aspen
Plant Physiol.
128
428-438
2002
Pinus taeda, Populus tremuloides
Manually annotated by BRENDA team
Chen, H.Y.; Babst, B.A.; Nyamdari, B.; Hu, H.; Sykes, R.; Davis, M.F.; Harding, S.A.; Tsai, C.J.
Ectopic expression of a loblolly pine class II 4-coumarate CoA ligase alters soluble phenylpropanoid metabolism but not lignin biosynthesis in Populus
Plant Cell Physiol.
55
1669-1678
2014
Pinus taeda (P41636), Pinus taeda (U5MY99), Pinus taeda
Manually annotated by BRENDA team