Reference on EC 4.1.2.4 - deoxyribose-phosphate aldolase and Organism(s) Escherichia coli and UniProt Accession P0A6L0
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AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Valentin-Hansen, P.; Boetius, F.; Hammer-Jespersen, K.; Svendsen, I.
The primary structure of Escherichia coli K12 2-deoxyribose 5-phosphate aldolase
Eur. J. Biochem.
125
561-566
1982
Escherichia coli
Racker, E.
Enzymatic synthesis and breakdown of desoxyribose phosphate
J. Biol. Chem.
196
347-365
1951
Escherichia coli, Escherichia coli 4157
Hespell, R.B.; Odelson, D.A.
Metabolism of RNA-ribose by Bdellovibrio bacteriovorus during intraperiplasmic growth on Escherichia coli
J. Bacteriol.
136
936-946
1978
Bdellovibrio bacteriovorus, Bdellovibrio bacteriovorus 109J, Escherichia coli
Stura, E.A.; Ghosh, S.; Garcia-Junceda, E.; Chen, L.; Wong, C.H.; Wilson, I.A.
Crystallization and preliminary crystallographic data for class I deoxyribose-5-phosphate aldolase from Escherichia coli: an application of reverse screening
Proteins Struct. Funct. Genet.
22
67-72
1995
Escherichia coli
Barbas, C.F.; Wang, Y.F.; Wong, C.H.
Deoxyribose-5-phosphate aldolase as a synthetic catalyst
J. Am. Chem. Soc.
112
2013-2014
1990
Escherichia coli
-
Chen, L.; Dumas, D.P.; Wong, C.H.
Deoxyribose-5-phosphate aldolase as a catalyst in asymetric aldol condensation
J. Am. Chem. Soc.
114
741-748
1992
Escherichia coli
-
Wong, C.H.; Garcia-Junceda, E.; Chen, L.; Blanco, O.; Gijsen, H.J.M.; Steensma, D.H.
Recombinant 2-deoxyribose-5-phosphate aldolase in organic synthesis: use of sequential two-substrate and three-substrate aldol reactions
J. Am. Chem. Soc.
117
3333-3339
1995
Escherichia coli, Escherichia coli DH5-alpha
-
DeSantis, G.; Liu, J.; Clark, D.P.; Heine, A.; Wilson, I.A.; Wong, C.H.
Structure-based mutagenesis approaches toward expanding the substrate specificity of D-2-deoxyribose-5-phosphate aldolase
Bioorg. Med. Chem.
11
43-52
2003
Escherichia coli
Heine, A.; Luz, J.G.; Wong, C.H.; Wilson, I.A.
Analysis of the class I aldolase binding site architecture based on the crystal structure of 2-deoxyribose-5-phosphate aldolase at 0.99A resolution
J. Mol. Biol.
343
1019-1034
2004
Escherichia coli (P0A6L0)
Liu, J.; Hsu, C.C.; Wong, C.H.
Sequential aldol condensation catalyzed by DERA mutant Ser238Asp and a formal total synthesis of atorvastatin
Tetrahedron Lett.
45
2439-2441
2004
Escherichia coli
-
Horinouchi, N.; Ogawa, J.; Kawano, T.; Sakai, T.; Saito, K.; Matsumoto, S.; Sasaki, M.; Mikami, Y.; Shimizu, S.
Efficient production of 2-deoxyribose 5-phosphate from glucose and acetaldehyde by coupling of the alcoholic fermentation system of Bakers yeast and deoxyriboaldolase-expressing Escherichia coli
Biosci. Biotechnol. Biochem.
70
1371-1378
2006
Escherichia coli, Escherichia coli 10B5/pTS8
Jennewein, S.; Schuermann, M.; Wolberg, M.; Hilker, I.; Luiten, R.; Wubbolts, M.; Mink, D.
Directed evolution of an industrial biocatalyst: 2-deoxy-D-ribose 5-phosphate aldolase
Biotechnol. J.
1
537-548
2006
Escherichia coli
Horinouchi, N.; Ogawa, J.; Kawano, T.; Sakai, T.; Saito, K.; Matsumoto, S.; Sasaki, M.; Mikami, Y.; Shimizu, S.
One-pot microbial synthesis of 2-deoxyribonucleoside from glucose, acetaldehyde, and a nucleobase
Biotechnol. Lett.
28
877-881
2006
Escherichia coli, Escherichia coli 10B5/pTS8
Feron, G.; Mauvais, G.; Martin, F.; Semon, E.; Blin-Perrin, C.
Microbial production of 4-hydroxybenzylidene acetone, the direct precursor of raspberry ketone
Lett. Appl. Microbiol.
45
29-35
2007
Bacillus cereus, Bacillus subtilis, Escherichia coli
Stanton, C.L.; Houk, K.N.
Benchmarking pKa prediction methods for residues in proteins
J. Chem. Theory Comput.
4
951-966
2008
Escherichia coli (P0A6L0)
Reinicke, S.; Rees, H.C.; Espeel, P.; Vanparijs, N.; Bisterfeld, C.; Dick, M.; Rosencrantz, R.R.; Brezesinski, G.; de Geest, B.G.; Du Prez, F.E.; Pietruszka, J.; Boeker, A.
Immobilization of 2-deoxy-D-ribose-5-phosphate aldolase in polymeric thin films via the Langmuir-Schaefer Technique
ACS Appl. Mater. Interfaces
9
8317-8326
2017
Escherichia coli
Subrizi, F.; Crucianelli, M.; Grossi, V.; Passacantando, M.; Botta, G.; Antiochia, R.; Saladino, R.
Versatile and efficient immobilization of 2-deoxyribose-5-phosphate aldolase (DERA) on multiwalled carbon nanotubes
ACS Catal.
4
3059-3068
2014
Escherichia coli (P0A6L0)
-
Zhang, S.; Bisterfeld, C.; Bramski, J.; Vanparijs, N.; De Geest, B.G.; Pietruszka, J.; Boeker, A.; Reinicke, S.
Biocatalytically active thin films via self-assembly of 2-deoxy-D-ribose-5-phosphate aldolase-poly(N-isopropylacrylamide) conjugates
Bioconjug. Chem.
29
104-116
2018
Escherichia coli
Ma, H.; Szeler, K.; Kamerlin, S.C.L.; Widersten, M.
Linking coupled motions and entropic effects to the catalytic activity of 2-deoxyribose-5-phosphate aldolase (DERA)
Chem. Sci.
7
1415-1421
2016
Escherichia coli (P0A6L0)
Fei, H.; Xu, G.; Wu, J.; Yang, L.
Improvement of the thermal stability and aldehyde tolerance of deoxyriboaldolase via immobilization on nano-magnet material
J. Mol. Catal. B
101
87-91
2014
Escherichia coli
-
Bisterfeld, C.; Kberl, I.; Dick, M.; Pietruszka, J.
A fluorogenic screening for enantio- and diastereoselectivity of 2-deoxy-D-ribose-5-phosphate aldolases
Synlett
27
11-16
2016
Escherichia coli, Pyrobaculum aerophilum, Rhodococcus erythropolis, Thermotoga maritima, Colwellia psychrerythraea, Shewanella halifaxensis
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