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Information on EC 2.7.7.84 - 2'-5' oligoadenylate synthase and Organism(s) Sus scrofa and UniProt Accession Q29599

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EC Tree
IUBMB Comments
The enzyme is activated by binding to double-stranded RNA. The resulting product binds to and activates RNase L, which subsequently degrades the RNA. Oligoadenylates of chain lengths 2, 4 and 5 are also produced. The dimer does not have any known biological activity .
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Sus scrofa
UNIPROT: Q29599
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Word Map
The taxonomic range for the selected organisms is: Sus scrofa
The enzyme appears in selected viruses and cellular organisms
Reaction Schemes
Synonyms
2-5a synthetase, 2',5'-oligoadenylate synthetase, 2'-5'-oligoadenylate synthetase, 2'-5' oligoadenylate synthetase, oas1b, oas1a, 2'-5'-oligoadenylate synthetase 1, 2'-5'oas, 2'5' oligoadenylate synthetase, oligoadenylate synthetase-like, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
2'-5'-oligoadenylate synthetase
-
SYSTEMATIC NAME
IUBMB Comments
ATP:ATP adenylyltransferase (2'-5' linkages-forming)
The enzyme is activated by binding to double-stranded RNA. The resulting product binds to and activates RNase L, which subsequently degrades the RNA. Oligoadenylates of chain lengths 2, 4 and 5 are also produced. The dimer does not have any known biological activity [2].
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
3 ATP
pppA2'p5'A2'p5'A + 2 diphosphate
show the reaction diagram
-
-
-
?
dATP + NAD+
?
show the reaction diagram
-
-
-
?
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
3 ATP
pppA2'p5'A2'p5'A + 2 diphosphate
show the reaction diagram
-
-
-
?
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
ATP
substrate inhibition at higher concentrations
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
dsRNA
2'-5'-oligoadenylate synthases are activated by viral double-stranded RNA in infected cells and initiate a cellular response by synthesizing 2'-5'-oligoadenylates, which in turn activate RNase L. All mammalian OAS proteins require dsRNA for activity ssRNA or DNA does not activate this class of enzymes. The dsRNA activator must be at least 15 nucleotides long, and no modification of the 2'-hydroxyl group is tolerated. OAS1 RNA activation site structure, overview
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KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.00044 - 0.0017
ATP
0.0011 - 0.0014
NAD+
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.95 - 8.1
ATP
0.99 - 3.6
NAD+
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.0005
OAS1 mutant R38E/K41E/K59E/R194E/R198E, pH and temperature not specified in the publication
0.001
OAS1 mutant R194E/R198E, pH and temperature not specified in the publication
0.004
OAS1 mutant R198E, pH and temperature not specified in the publication
0.007
OAS1 mutant R198M, pH and temperature not specified in the publication
0.016
OAS1 mutant R38E/K41E, pH and temperature not specified in the publication
0.05
OAS1 mutant K203E, pH and temperature not specified in the publication
0.117
OAS1 mutant K59E, pH and temperature not specified in the publication
0.16
OAS1 mutant K41E, pH and temperature not specified in the publication
0.17
OAS1 mutant R194E, pH and temperature not specified in the publication
0.22
OAS1 mutant R38E, pH and temperature not specified in the publication
10.1
wild-type OAS1, pH and temperature not specified in the publication
3.3
OAS1 mutant R245E/K246E, pH and temperature not specified in the publication
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
isozyme OAS1
UniProt
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
evolution
conserved catalytic mechanism for the 2'- and 3'-specific nucleotidyl transferases. specific nucleotidyl transferases. Comparison with structures of other superfamily members indicates that the donor substrates are bound by conserved active site features while the acceptor substrates are oriented by nonconserved regions
malfunction
mutation of the conserved Leu3 and Pro7 and of Cys330, Cys331, and Lys332 reduce enzyme activity. Mutants S62A and S63A display Michaelis-Menten kinetics toward NAD+, the kcat of the Ser62Ala mutant is approximately 3fold lower than the kcat for either the wild-type or the S63A mutant
physiological function
2'-5'-oligoadenylate synthases are interferon-induced, double-stranded RNA-activated antiviral enzymes which are the only proteins known to catalyze 2'-specific nucleotidyl transfer
additional information
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
OAS1_PIG
349
0
40246
Swiss-Prot
other Location (Reliability: 2)
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
OAS1, purified recombinant porcine OAS1, 1.5 mg/ml protein in 50 mM NaCl, 10 mM HEPES, pH 6.8, 0.5 mM EDTA, with 5 mM of iodoacetamide for 30 min at room temperature, then concentrated to 6 mg/ml for crystallization by vapor diffusion, best crystals grow at 20°C in 1:1 drops with a well solution of 30% PEG 2000 MME, 0.2 M ammonium sulfate, and 0.1 M sodium cacodylate at pH 6, X-ray diffraction structure determination and analysis at 2.2 A resolution, molecular replacement
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
K203E
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
K212A
the mutant has strongly impaired catalytic activity, KM for ATP is increased by almost 4fold relative to that of the wild-type protein, and kcat is decreased by roughly 8fold
K41E
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
K59E
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
R194E
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
R194E/R198E
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
R198E
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
R198M
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
R245E/K246E
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
R38E
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
R38E/K41E
site-directed mutagenesis, the mutant shows reduced activity compared to the wild-type enzyme
R38E/K41E/K59E/R194E/R198E
site-directed mutagenesis, the mutant is almost inactive
S62A
the mutant displays a strong substrate inhibition at higher ATP concentrations, more dramatic than that observed for wild-type OAS1
S63A
the mutant displays a strong substrate inhibition at higher ATP concentrations, more dramatic than that observed for wild-type OAS1
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
recombinant wild-type and mutant OAS1 from Escherichia coli strain BL21(DE3) by gel filtration, ammonium sulfate fractionation, heparin affinity chromatography and gel filtration
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
OAS1, expression of wild-type and mutant enzymes in Escherichia coli strain BL21(DE3)
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
induction by interferon
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Hartmann, R.; Justesen, J.; Sarkar, S.N.; Sen, G.C.; Yee, V.C.
Crystal structure of the 2'-specific and double-stranded RNA-activated interferon-induced antiviral protein 2'-5'-oligoadenylate synthetase
Mol. Cell
12
1173-1185
2003
Homo sapiens, Sus scrofa, Sus scrofa (Q29599)
Manually annotated by BRENDA team