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Sequence of TOP3A_ORYSJ

EC Number:5.6.2.1

EC Number
Recommended Name
Accession Code
Organism
No of amino acids
Molecular Weight [Da]
Source
DNA topoisomerase
C7J0A2
Oryza sativa subsp. japonica
928
103754
Reaction
ATP-independent breakage of single-stranded DNA, followed by passage and rejoining
Other sequences found for EC No. 5.6.2.1

General information:

Sequence
show sequence in fasta format
  0 MHHGGGGGAI RVLNVAEKPS VAKSVAEILS RPSGGMRSRE GRSRYNRVFE FDYSIGGRAC
 60 HMLVTSVTGH LMELEFDDRF RRWHSCDPAD LFHAPVRKSV PQDKQDIKRT LEEEARKCQW
120 LVLWLDCDRE GENIAYEVID ICAGANSRLN IWRARFSALI DREIHEAVQH LDRPNKLFAD
180 AVDARQEIDL RIGASFTRFQ TMLLKDAFVL DDTGDDRNII LSYGPCQFPT LGFIVERFWE
240 IQAHEPEEFW TINCSHTSDE GTASFGWIRG HLFDYSSAVV IYEMCVEEPM ATVQNVRNQE
300 KLKYPPYPLS TIELQKRASR YFRMSSEHTM KVAEELYQAG FISYPRTETD NFSPNTDLHS
360 IVHEQVAHPN WGTYAQRLLD PEARLWRNPS NGGHDDKAHP PIHPTKFSAG ETNWTDNHKK
420 LYELVVRHFL ACCSQPAVGA ETTVEIDIAG EQFNASGRVV LAKNYLDVYR FDSWGGTLLP
480 TYIIGQQFVP TTLTLDSGMT RPPPLLAEAD LLGCMDKAGI GTDATMHDHI KKLLDRCYAT
540 KDANTRFSPT NLGEALVMGY DEMGYELWKP YLRSMMEADM KSVSIGTKSK SEVLENCLQQ
600 MKACFLDARA NKVKLFDAMG TFFARSSRPV NETQNSIETV RPCAACNESE MFLKQRPTGE
660 FMVGCRGFPQ CRNVVWLPRS LSGAAVTDQV CPTCAPGPVY KIQFKFRRRD IPPNFDVDHL
720 GCIGGCDDIL KELMELSRFG SHSQTATPAR NQSQTASGVR QGSSRQDLHT SFHPAVQFTN
780 GQTPVVNPQG FRSTHTQSSG NASGQVQCTS CREPCVLRTA NTEANRGRKF YKCQNLACGF
840 FAWEDDVENS APRGRGGRGR GGRSSSRQSS ASASAGRRGG TQGRGRRGRG RNADGMMFVA
900 ATGEPVYGSC FICGDPTHFA NVCPNLGR
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Sequence related references
Sequence Reference
Authors
Title
Journal
Volume
Pages
Year
PubMed ID
368721
Buell C.R.,Yuan Q.,Ouyang S.,Liu J.,Zhu W.,Wang A.,Maiti R.,Haas B.,Wortman J.,Pertea M.,Jones K.M.,Kim M.,Overton L.,Tsitrin T.,Fadrosh D.,Bera J.,Weaver B.,Jin S.,Johri S.,Reardon M.,Webb K.,Hill J.,Moffat K.,Tallon L.,Van Aken S.,Lewis M.,Utterback T.,Feldblyum T.,Zismann V.,Iobst S.,Hsiao J.,de Vazeille A.R.,Salzberg S.L.,White O.,Fraser C.M.,Yu Y.,Kim H.,Rambo T.,Currie J.,Collura K.,Kernodle-Thompson S.,Wei F.,Kudrna K.,Ammiraju J.S.S.,Luo M.,Goicoechea J.L.,Wing R.A.,Henry D.,Oates R.,Palmer M.,Pries G.,Saski C.,Simmons J.,Soderlund C.,Nelson W.,de la Bastide M.,Spiegel L.,Nascimento L.,Huang E.,Preston R.,Zutavern T.,Palmer L.,O'Shaughnessy A.,Dike S.,McCombie W.R.,Minx P.,Cordum H.,Wilson R.,Jin W.,Lee H.R.,Jiang J.,Jackson S.
Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species.
Genome Res.
15
1284-1291
2005
368722
The map-based sequence of the rice genome.
Nature
436
793-800
2005
368723
The rice annotation project database (RAP-DB): 2008 update.
Nucleic Acids Res.
36
0-0
2008
368724
Kawahara Y.,de la Bastide M.,Hamilton J.P.,Kanamori H.,McCombie W.R.,Ouyang S.,Schwartz D.C.,Tanaka T.,Wu J.,Zhou S.,Childs K.L.,Davidson R.M.,Lin H.,Quesada-Ocampo L.,Vaillancourt B.,Sakai H.,Lee S.S.,Kim J.,Numa H.,Itoh T.,Buell C.R.,Matsumoto T.
Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data.
Rice
6
4-4
2013