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Information on Organism Rhodococcus hoagii

Synonyms:
ATCC 14887 [[Nocardia restricta]]; ATCC 25729 [[Rhodococcus equi]]; ATCC 6939 [[Rhodococcus equi]]; ATCC 7005 [[Corynebacterium hoagii]]; "Bacillus hoagii" Morse 1912; Bacillus hoagii; CCUG 17758 [[Nocardia restricta]]; CCUG 20991 [[Corynebacterium hoagii]]; CCUG 892 [[Rhodococcus equi]]; CIP 54.72 [[Rhodococcus equi]]; CIP 81.17 [[Corynebacterium hoagii]]; Corynebacterium equi Magnusson 1923 (Approved Lists 1980); Corynebacterium hoagii (Morse 1912) Eberson 1918 (Approved Lists 1980); Corynebacterium hoagii; "Corynebacterium magnusson-holth" Plum 1940; Corynebacterium magnusson-holth; "Corynebacterium purulentus" (sic) Holtman 1945; Corynebacterium purulentus; "Corynebacterium pyogenes (equi)" Miessner and Wetzel 1923; "Corynebacterium (pyogenes) equi roseum" Lutje 1923; Corynebacterium (pyogenes) equi roseum; Corynebacterium pyogenes (equi); culture-collection:NRRL:B:16538 [[Rhodococcus equi]]; DSM 20295 [[Corynebacterium hoagii]]; DSM 20307 [[Rhodococcus equi]]; DSM 43199 [[Nocardia restricta]]; HAMBI 2061 [[Rhodococcus equi]]; IFO 14956 [[Rhodococcus equi]]; JCM 1311 [[Rhodococcus equi]]; JCM 1319 [[Corynebacterium hoagii]]; JCM 3209 [[Rhodococcus equi]]; JCM 3223 [[Nocardia restricta]]; LMG 18452 [[Rhodococcus equi]]; LMG:18452 [[Rhodococcus equi]]; LMG 7335 [[Nocardia restricta]]; LMG:7335 [[Nocardia restricta]]; "Mycobacterium equi" (Magnusson 1923) Jensen 1934; Mycobacterium equi; Mycobacterium restrictum; "Mycobacterium restrictum" (Turfitt 1944) Krasil'nikov 1949; NBRC 101255 [[Rhodococcus equi]]; NBRC 103062 [[Corynebacterium hoagii]]; NBRC 14956 [[Rhodococcus equi]]; NCTC 10673 [[Corynebacterium hoagii]]; NCTC 1621 [[Rhodococcus equi]]; Nocardia restricta; Nocardia restricta (Turfitt 1944) McClung 1974 (Approved Lists 1980); NRRL B-16538 [[Rhodococcus equi]]; "Prescottella equi" (Magnusson 1923) Jones et al. 2013; Prescottella equi; "Prescottia equi" (Magnusson 1923) Jones et al. 2013; Prescottia equi; Proactinomyces restrictus; "Proactinomyces restrictus" Turfitt 1944; Rhodococcus equi; Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists 1980); Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 emend. Nouioui et al. 2018; Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1979 (sic); Rhodococcus hoagii (Morse 1912) Kampfer et al. 2014; Rhodococcus hoagii (Morse 1912) Kampfer et al. 2014 emend. Nouioui et al. 2018; Rhodococcus hoagii; VKM Ac-953 [[Rhodococcus equi]]; Corynebacterium equi; Corynebacterium equii; Nocardia restrica; "Prescottia equi" Jones et al. 2013; Corynebacterium hoagii (Morse 1912) Eberson 1918; Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977; Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists, 1980); Rhodococcus hoagii ((Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists 1980) Kampfer et al. 2014; Rhodococcus hoagii ((Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists, 1980) Kampfer et al. 2014; ATCC 25729; ATCC 6939; CCUG 892; CIP 54.72; DSM 20307; HAMBI 2061; IFO 14956; JCM 1311; JCM 3209; LMG 18452; NBRC 101255; NBRC 14956; NCTC 1621; NRRL B-16538; VKM Ac-953;
Word Map for Organism Rhodococcus hoagii
TaxTree of Organism Rhodococcus hoagii
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Actinobacteria can be found in Brenda BRENDA pathways(phylum)
Actinomycetia can be found in Brenda BRENDA pathways(class)
Corynebacteriales can be found in Brenda BRENDA pathways(order)
Nocardiaceae can be found in Brenda BRENDA pathways(family)
Rhodococcus can be found in Brenda BRENDA pathways(genus)
Rhodococcus hoagii can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
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PWY-7726
(8E,10E)-dodeca-8,10-dienol biosynthesis
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PWY-7654
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
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-
PWY-7216
1,5-anhydrofructose degradation
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PWY-6992
2-arachidonoylglycerol biosynthesis
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-
PWY-8052
2-methyl-branched fatty acid beta-oxidation
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-
PWY-8181
2-methylpropene degradation
-
-
PWY-7778
3-hydroxy-4-methyl-anthranilate biosynthesis I
-
-
PWY-7717
3-hydroxy-4-methyl-anthranilate biosynthesis II
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-
PWY-7765
3-hydroxypropanoate/4-hydroxybutanate cycle
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-
PWY-5789
3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate
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-
HCAMHPDEG-PWY
3-phenylpropanoate degradation
-
-
P281-PWY
3-phenylpropionate degradation
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-
3-phosphoinositide biosynthesis
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-
PWY-6352
4-hydroxy-2(1H)-quinolone biosynthesis
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PWY-6661
4-hydroxy-2-nonenal detoxification
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PWY-7112
4-hydroxybenzoate biosynthesis III (plants)
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PWY-6435
6-hydroxymethyl-dihydropterin diphosphate biosynthesis
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-
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
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PWY-6147
6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium)
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PWY-7852
ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
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PWY-7832
ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide
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PWY-7831
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acridone alkaloid biosynthesis
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PWY-5958
acrylonitrile degradation I
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-
PWY-7308
adenine and adenosine salvage I
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-
P121-PWY
adenine and adenosine salvage III
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-
PWY-6609
adenine and adenosine salvage V
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-
PWY-6611
adenosine nucleotides degradation II
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SALVADEHYPOX-PWY
adipate biosynthesis
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PWY-8347
adipate degradation
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic toluene degradation
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alanine metabolism
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Alanine, aspartate and glutamate metabolism
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aldoxime degradation
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P345-PWY
alpha-Linolenic acid metabolism
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Amaryllidacea alkaloids biosynthesis
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PWY-7826
Amino sugar and nucleotide sugar metabolism
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-
Aminobenzoate degradation
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-
ammonia assimilation cycle I
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PWY-6963
ammonia assimilation cycle II
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-
PWY-6964
ammonia assimilation cycle III
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AMMASSIM-PWY
ammonia oxidation II (anaerobic)
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-
P303-PWY
androgen and estrogen metabolism
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-
androstenedione degradation I (aerobic)
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PWY-6944
androstenedione degradation II (anaerobic)
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PWY-8152
apratoxin A biosynthesis
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PWY-8361
Arachidonic acid metabolism
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arachidonic acid metabolism
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-
Arginine and proline metabolism
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Arginine biosynthesis
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arginine metabolism
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arsenate detoxification IV (mycothiol)
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PWY-6421
arsenic detoxification (mammals)
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PWY-4202
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Ascorbate and aldarate metabolism
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ascorbate recycling (cytosolic)
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PWY-6370
Atrazine degradation
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bacilysin biosynthesis
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PWY-7626
benzoate biosynthesis I (CoA-dependent, beta-oxidative)
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PWY-6443
benzoate biosynthesis III (CoA-dependent, non-beta-oxidative)
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PWY-6446
Benzoate degradation
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benzoyl-CoA biosynthesis
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PWY-6458
benzoyl-CoA degradation I (aerobic)
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PWY-1361
beta-Alanine metabolism
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beta-D-glucuronide and D-glucuronate degradation
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PWY-7247
bile acid biosynthesis, neutral pathway
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bile acids deconjugation
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PWY-8135
Biosynthesis of secondary metabolites
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-
bupropion degradation
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PWY66-241
Butanoate metabolism
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-
Caffeine metabolism
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camalexin biosynthesis
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CAMALEXIN-SYN
canavanine degradation
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PWY-31
Caprolactam degradation
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-
Carbon fixation in photosynthetic organisms
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-
Carbon fixation pathways in prokaryotes
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-
Carotenoid biosynthesis
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carotenoid biosynthesis
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catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
chitin deacetylation
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PWY-7118
chitin derivatives degradation
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PWY-6906
cholesterol degradation to androstenedione I (cholesterol oxidase)
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PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
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PWY-6946
choline biosynthesis III
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PWY-3561
cinnamate and 3-hydroxycinnamate degradation to 2-hydroxypentadienoate
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PWY-6690
citric acid cycle
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CO2 fixation in Crenarchaeota
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colanic acid building blocks biosynthesis
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COLANSYN-PWY
crotonate fermentation (to acetate and cyclohexane carboxylate)
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PWY-7401
Cysteine and methionine metabolism
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D-galactosamine and N-acetyl-D-galactosamine degradation
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PWY-7395
D-galactose degradation I (Leloir pathway)
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PWY-6317
D-galactose detoxification
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PWY-3821
d-mannose degradation
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D-myo-inositol (1,4,5)-trisphosphate biosynthesis
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PWY-6351
D-myo-inositol-5-phosphate metabolism
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PWY-6367
degradation of aromatic, nitrogen containing compounds
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degradation of hexoses
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degradation of sugar acids
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denitrification
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diethylphosphate degradation
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PWY-5491
docosahexaenoate biosynthesis III (6-desaturase, mammals)
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PWY-7606
drosopterin and aurodrosopterin biosynthesis
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PWY-7442
Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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ergothioneine biosynthesis I (bacteria)
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PWY-7255
erythro-tetrahydrobiopterin biosynthesis I
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PWY-5663
ethanol degradation IV
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PWY66-162
ethene biosynthesis III (microbes)
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PWY-6854
Ether lipid metabolism
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fatty acid beta-oxidation I (generic)
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FAO-PWY
fatty acid beta-oxidation II (plant peroxisome)
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PWY-5136
fatty acid beta-oxidation IV (unsaturated, even number)
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PWY-5138
fatty acid beta-oxidation VI (mammalian peroxisome)
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PWY66-391
Fatty acid biosynthesis
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fatty acid biosynthesis initiation (type I)
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PWY-5966-1
Fatty acid degradation
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Fatty acid elongation
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fatty acid salvage
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PWY-7094
Fe(II) oxidation
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PWY-6692
Flavone and flavonol biosynthesis
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fluoroacetate and fluorothreonine biosynthesis
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PWY-6644
Fluorobenzoate degradation
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Folate biosynthesis
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Galactose metabolism
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Geraniol degradation
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gliotoxin biosynthesis
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PWY-7533
glutamate and glutamine metabolism
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glutaryl-CoA degradation
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PWY-5177
glutathione biosynthesis
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GLUTATHIONESYN-PWY
Glutathione metabolism
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glutathione metabolism
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-
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
Glycerolipid metabolism
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-
Glycerophospholipid metabolism
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glycine betaine biosynthesis
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Glycine, serine and threonine metabolism
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glycogen biosynthesis
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glycogen biosynthesis I (from ADP-D-Glucose)
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GLYCOGENSYNTH-PWY
glycogen biosynthesis II (from UDP-D-Glucose)
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PWY-5067
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
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PWY-7900
glycogen metabolism
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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Glycosphingolipid biosynthesis - lacto and neolacto series
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Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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GLYOXYLATE-BYPASS
guanine and guanosine salvage I
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PWY-6620
guanosine nucleotides degradation III
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PWY-6608
homoglutathione biosynthesis
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-
PWY-6840
IAA biosynthesis
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-
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
inosine 5'-phosphate degradation
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PWY-5695
inosine-5'-phosphate biosynthesis I
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PWY-6123
inosine-5'-phosphate biosynthesis II
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PWY-6124
inosine-5'-phosphate biosynthesis III
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PWY-7234
Inositol phosphate metabolism
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L-arginine degradation I (arginase pathway)
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ARGASEDEG-PWY
L-arginine degradation VI (arginase 2 pathway)
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ARG-PRO-PWY
L-arginine degradation VII (arginase 3 pathway)
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ARG-GLU-PWY
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-aspartate degradation II (aerobic)
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PWY-8291
L-aspartate degradation III (anaerobic)
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PWY-8294
L-citrulline biosynthesis
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CITRULBIO-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamine biosynthesis I
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GLNSYN-PWY
L-Ndelta-acetylornithine biosynthesis
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PWY-6922
L-phenylalanine biosynthesis I
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PHESYN
L-phenylalanine biosynthesis II
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PWY-3462
L-serine biosynthesis I
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SERSYN-PWY
L-tryptophan biosynthesis
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TRPSYN-PWY
L-tryptophan degradation I (via anthranilate)
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TRPCAT-PWY
L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
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PWY-5651
L-tryptophan degradation XI (mammalian, via kynurenine)
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PWY-6309
L-tyrosine biosynthesis I
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TYRSYN
L-tyrosine biosynthesis II
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PWY-3461
L-tyrosine biosynthesis III
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PWY-6120
Limonene and pinene degradation
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-
Linoleic acid metabolism
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lipid metabolism
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-
luteolin triglucuronide degradation
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PWY-7445
Lysine degradation
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melatonin degradation I
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PWY-6398
Metabolic pathways
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metabolism of amino sugars and derivatives
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metabolism of disaccharids
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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methanol oxidation to formaldehyde IV
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PWY-5506
methyl indole-3-acetate interconversion
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PWY-6303
methyl ketone biosynthesis (engineered)
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PWY-7007
methyl tert-butyl ether degradation
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PWY-7779
methylsalicylate degradation
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PWY18C3-24
Microbial metabolism in diverse environments
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mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
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PWY-6397
N-acetyl-D-galactosamine degradation
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PWY-7077
N-acetylglucosamine degradation I
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GLUAMCAT-PWY
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
Nicotinate and nicotinamide metabolism
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-
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
nitrate reduction I (denitrification)
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-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
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PWY-381
nitrate reduction VII (denitrification)
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PWY-6748
nitric oxide biosynthesis II (mammals)
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PWY-4983
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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-
PWY-6523
Nitrogen metabolism
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-
nocardicin A biosynthesis
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PWY-7797
non-pathway related
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nucleoside and nucleotide degradation (archaea)
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-
PWY-5532
O-Antigen nucleotide sugar biosynthesis
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oleandomycin activation/inactivation
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PWY-6972
oleate beta-oxidation
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-
PWY0-1337
ophthalmate biosynthesis
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PWY-8043
Other glycan degradation
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Oxidative phosphorylation
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oxidative phosphorylation
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palmitate biosynthesis I (type I fatty acid synthase)
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PWY-5994
Penicillin and cephalosporin biosynthesis
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-
pentachlorophenol degradation
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-
PCPDEG-PWY
Pentose and glucuronate interconversions
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Peptidoglycan biosynthesis
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peptidoglycan biosynthesis
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-
peptidoglycan biosynthesis II (staphylococci)
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-
PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
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-
PWY-6471
peptidoglycan maturation (meso-diaminopimelate containing)
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-
PWY0-1586
peptidoglycan recycling I
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-
PWY0-1261
Phenazine biosynthesis
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-
phenol degradation
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-
phenylacetate degradation (aerobic)
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-
phenylacetate degradation I (aerobic)
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-
PWY0-321
Phenylalanine metabolism
-
-
phenylalanine metabolism
-
-
Phenylalanine, tyrosine and tryptophan biosynthesis
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-
phosphatidate metabolism, as a signaling molecule
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PWY-7039
phospholipases
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-
LIPASYN-PWY
photosynthesis
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-
plasmalogen biosynthesis I (aerobic)
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-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
platensimycin biosynthesis
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PWY-8179
Porphyrin and chlorophyll metabolism
-
-
preQ0 biosynthesis
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-
PWY-6703
Primary bile acid biosynthesis
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-
Propanoate metabolism
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-
purine deoxyribonucleosides degradation I
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-
PWY-7179
purine deoxyribonucleosides degradation II
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-
PWY-7179-1
Purine metabolism
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-
purine metabolism
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-
purine ribonucleosides degradation
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-
PWY0-1296
putrescine biosynthesis III
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-
PWY-46
Pyrimidine metabolism
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-
pyrimidine metabolism
-
-
pyrimidine nucleobases salvage I
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-
PWY-7183
pyrimidine nucleobases salvage II
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-
PWY-7194
pyrimidine ribonucleosides salvage III
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-
PWY-7195
pyruvate fermentation to butanoate
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CENTFERM-PWY
pyruvate fermentation to butanol I
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-
PWY-6583
pyruvate fermentation to butanol II (engineered)
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-
PWY-6883
pyruvate fermentation to hexanol (engineered)
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-
PWY-6863
reactive oxygen species degradation
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-
DETOX1-PWY-1
retinol biosynthesis
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PWY-6857
Retinol metabolism
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-
salinosporamide A biosynthesis
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-
PWY-6627
Secondary bile acid biosynthesis
-
-
serine metabolism
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-
serotonin and melatonin biosynthesis
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-
PWY-6030
serotonin metabolism
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-
sphingolipid biosynthesis (mammals)
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PWY-7277
Sphingolipid metabolism
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-
sphingomyelin metabolism
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-
PWY3DJ-11281
Spodoptera littoralis pheromone biosynthesis
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-
PWY-7656
stachyose degradation
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-
PWY-6527
Starch and sucrose metabolism
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-
starch biosynthesis
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PWY-622
Steroid degradation
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Steroid hormone biosynthesis
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Styrene degradation
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succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
sulfopterin metabolism
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superoxide radicals degradation
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DETOX1-PWY
superpathway of methylsalicylate metabolism
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PWY18C3-25
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
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PWY-7328
testosterone degradation (anaerobic)
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-
PWY-8155
tetrahydrofolate metabolism
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-
tetrahydromonapterin biosynthesis
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-
PWY0-1433
Thiamine metabolism
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threo-tetrahydrobiopterin biosynthesis
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-
PWY-6983
Toluene degradation
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-
triacylglycerol degradation
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LIPAS-PWY
tRNA processing
-
-
PWY0-1479
Tryptophan metabolism
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-
tryptophan metabolism
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-
UDP-alpha-D-galactose biosynthesis
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-
PWY-7344
urea cycle
urea degradation II
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-
PWY-5704
valine metabolism
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-
Valine, leucine and isoleucine degradation
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-
valproate beta-oxidation
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-
PWY-8182
vanillin biosynthesis I
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-
PWY-5665
xanthine and xanthosine salvage
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-
SALVPURINE2-PWY
Xylene degradation
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-
xyloglucan degradation II (exoglucanase)
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PWY-6807
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LINKS TO OTHER DATABASES (specific for Rhodococcus hoagii)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA