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Literature summary extracted from
- Spatio-temporal resolution of taxonomic and functional microbiome of Lonar soda lake of India reveals metabolic potential for bioremediation (2020), Chemosphere, 264, 128574 .
Cloned(Commentary)
| EC Number | Cloned (Comment) | Organism |
|---|---|---|
| 2.8.3.6 | gene pcaI, DNA and amino acid sequence determination and analysis | uncultured bacterium |
Organism
| EC Number | Organism | UniProt | Comment | Textmining |
|---|---|---|---|---|
| 2.8.3.6 | uncultured bacterium | - |
metagenomic DNA is extracted from the 18 sediment samples from post-monsoon and pre-monsoon Lonar soda lake, India, in 2018 and 2019. Proteobacteria and Firmicutes are prevalent bacterial phyla in the pre-monsoon and post-monsoon samples | - |
Synonyms
| EC Number | Synonyms | Comment | Organism |
|---|---|---|---|
| 2.8.3.6 | PcaL | - |
uncultured bacterium |
General Information
| EC Number | General Information | Comment | Organism |
|---|---|---|---|
| 2.8.3.6 | evolution | the abundant genes for benzoate degradation are pcaI: 3-oxoadipate CoA-transferase, alpha subunit, pcaH: protocatechuate 3,4-dioxygenase, beta subunit, and pcaB: 3-carboxy-cis, cis-muconate cycloisomerase, and 4-oxalocrotonate tautomerase. Comparison of the microbial diversity and functional potential of xenobiotic degradation pathways with seasonal changes in the Lonar soda lake, metagenomic study, overview | uncultured bacterium |
| 2.8.3.6 | physiological function | functional analysis of pre-monsoon and post-monsoon metagenomic samples, overview | uncultured bacterium |
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Release 2023.1 (January 2023)
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