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Literature summary extracted from
- Rubber oxygenases (2019), Appl. Microbiol. Biotechnol., 103, 125-142 .
Molecular Weight [Da]
| EC Number | Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
|---|---|---|---|---|
| 1.13.11.85 | 71100 | - |
gel filtration | Corallococcus coralloides |
| 1.13.11.85 | 71500 | - |
gel filtration | Rhizobacter gummiphilus |
| 1.13.11.85 | 71500 | - |
gel filtration | Steroidobacter cummioxidans |
| 1.13.11.85 | 71900 | - |
gel filtration | Myxococcus fulvus |
| 1.13.11.85 | 72100 | - |
gel filtration | Haliangium ochraceum |
| 1.13.11.87 | 70800 | - |
mature protein | Rhizobacter gummiphilus |
| 1.13.11.87 | 74000 | - |
preprotein | Rhizobacter gummiphilus |
Natural Substrates/ Products (Substrates)
| EC Number | Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|---|
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | Corallococcus coralloides | - |
n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? |  |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | Haliangium ochraceum | - |
n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | Rhizobacter gummiphilus | - |
n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | Myxococcus fulvus | - |
n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | Steroidobacter cummioxidans | - |
n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | Rhizobacter gummiphilus NS21 | - |
n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | Steroidobacter cummioxidans 35Y | - |
n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | Corallococcus coralloides 35 | - |
n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | Rhodococcus rhodochrous | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | Nocardia farcinica | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | Gordonia polyisoprenivorans | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | Streptomyces sp. K30 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | Nocardia farcinica NVL3 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | Rhodococcus rhodochrous RPK1 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | Gordonia polyisoprenivorans VH2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
Organism
| EC Number | Organism | UniProt | Comment | Textmining |
|---|---|---|---|---|
| 1.13.11.85 | Corallococcus coralloides | - |
- |
- |
| 1.13.11.85 | Corallococcus coralloides 35 | - |
- |
- |
| 1.13.11.85 | Haliangium ochraceum | - |
- |
- |
| 1.13.11.85 | Myxococcus fulvus | - |
- |
- |
| 1.13.11.85 | Rhizobacter gummiphilus | - |
- |
- |
| 1.13.11.85 | Rhizobacter gummiphilus NS21 | - |
- |
- |
| 1.13.11.85 | Steroidobacter cummioxidans | - |
previously named Xanthomonas sp. 35Y | - |
| 1.13.11.85 | Steroidobacter cummioxidans 35Y | - |
previously named Xanthomonas sp. 35Y | - |
| 1.13.11.87 | Gordonia polyisoprenivorans | - |
- |
- |
| 1.13.11.87 | Gordonia polyisoprenivorans VH2 | - |
- |
- |
| 1.13.11.87 | Nocardia farcinica | - |
- |
- |
| 1.13.11.87 | Nocardia farcinica NVL3 | - |
- |
- |
| 1.13.11.87 | Rhizobacter gummiphilus | - |
- |
- |
| 1.13.11.87 | Rhizobacter gummiphilus NS21 | - |
- |
- |
| 1.13.11.87 | Rhodococcus rhodochrous | - |
- |
- |
| 1.13.11.87 | Rhodococcus rhodochrous RPK1 | - |
- |
- |
| 1.13.11.87 | Streptomyces sp. K30 | - |
- |
- |
Posttranslational Modification
| EC Number | Posttranslational Modification | Comment | Organism |
|---|---|---|---|
| 1.13.11.87 | proteolytic modification | the preprotein has a MW of 74000 Da, the mature protein has MW of 70800 Da | Rhizobacter gummiphilus |
Substrates and Products (Substrate)
| EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|---|
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | - |
Corallococcus coralloides | n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | - |
Haliangium ochraceum | n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | - |
Rhizobacter gummiphilus | n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | - |
Myxococcus fulvus | n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | - |
Steroidobacter cummioxidans | n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | - |
Rhizobacter gummiphilus NS21 | n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | - |
Steroidobacter cummioxidans 35Y | n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | cis-1,4-polyisoprene + n O2 | - |
Corallococcus coralloides 35 | n (4Z,8Z)-4,8-dimethyl-12-oxotrideca-4,8-dienal | - |
? | |
| 1.13.11.85 | additional information | the enzyme has no peroxidase activity | Corallococcus coralloides | ? | - |
- |
|
| 1.13.11.85 | additional information | the enzyme has no peroxidase activity | Haliangium ochraceum | ? | - |
- |
|
| 1.13.11.85 | additional information | the enzyme has no peroxidase activity | Rhizobacter gummiphilus | ? | - |
- |
|
| 1.13.11.85 | additional information | the enzyme has no peroxidase activity | Myxococcus fulvus | ? | - |
- |
|
| 1.13.11.85 | additional information | the enzyme has no peroxidase activity | Steroidobacter cummioxidans | ? | - |
- |
|
| 1.13.11.85 | additional information | the enzyme has no peroxidase activity | Rhizobacter gummiphilus NS21 | ? | - |
- |
|
| 1.13.11.85 | additional information | the enzyme has no peroxidase activity | Steroidobacter cummioxidans 35Y | ? | - |
- |
|
| 1.13.11.85 | additional information | the enzyme has no peroxidase activity | Corallococcus coralloides 35 | ? | - |
- |
|
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Rhodococcus rhodochrous | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Nocardia farcinica | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Gordonia polyisoprenivorans | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Streptomyces sp. K30 | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Nocardia farcinica NVL3 | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Rhodococcus rhodochrous RPK1 | ? | - |
? | |
| 1.13.11.87 | cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Gordonia polyisoprenivorans VH2 | ? | - |
? | |
| 1.13.11.87 | additional information | the enzyme has no peroxidase activity | Rhodococcus rhodochrous | ? | - |
- |
|
| 1.13.11.87 | additional information | the enzyme has no peroxidase activity | Nocardia farcinica | ? | - |
- |
|
| 1.13.11.87 | additional information | the enzyme has no peroxidase activity | Gordonia polyisoprenivorans | ? | - |
- |
|
| 1.13.11.87 | additional information | the enzyme has no peroxidase activity | Streptomyces sp. K30 | ? | - |
- |
|
| 1.13.11.87 | additional information | the enzyme has no peroxidase activity | Nocardia farcinica NVL3 | ? | - |
- |
|
| 1.13.11.87 | additional information | the enzyme has no peroxidase activity | Rhodococcus rhodochrous RPK1 | ? | - |
- |
|
| 1.13.11.87 | additional information | the enzyme has no peroxidase activity | Gordonia polyisoprenivorans VH2 | ? | - |
- |
|
| 1.13.11.87 | poly(cis-1,4-isoprene) + O2 | - |
Rhizobacter gummiphilus | ? | - |
? | |
| 1.13.11.87 | poly(cis-1,4-isoprene) + O2 | - |
Rhizobacter gummiphilus NS21 | ? | - |
? | |
| 1.13.11.87 | rubber + O2 | RoxB cleaves rubber in an endotype reaction | Rhizobacter gummiphilus | ? | - |
? | |
| 1.13.11.87 | rubber + O2 | RoxB cleaves rubber in an endotype reaction | Rhizobacter gummiphilus NS21 | ? | - |
? | |
Synonyms
| EC Number | Synonyms | Comment | Organism |
|---|---|---|---|
| 1.13.11.85 | roxA | - |
Corallococcus coralloides |
| 1.13.11.85 | roxA | - |
Haliangium ochraceum |
| 1.13.11.85 | roxA | - |
Rhizobacter gummiphilus |
| 1.13.11.85 | roxA | - |
Myxococcus fulvus |
| 1.13.11.85 | roxA | - |
Steroidobacter cummioxidans |
| 1.13.11.85 | rubber oxygenase A | - |
Corallococcus coralloides |
| 1.13.11.85 | rubber oxygenase A | - |
Haliangium ochraceum |
| 1.13.11.85 | rubber oxygenase A | - |
Rhizobacter gummiphilus |
| 1.13.11.85 | rubber oxygenase A | - |
Myxococcus fulvus |
| 1.13.11.85 | rubber oxygenase A | - |
Steroidobacter cummioxidans |
| 1.13.11.87 | latex clearing protein | - |
Rhodococcus rhodochrous |
| 1.13.11.87 | latex clearing protein | - |
Nocardia farcinica |
| 1.13.11.87 | latex clearing protein | - |
Gordonia polyisoprenivorans |
| 1.13.11.87 | latex clearing protein | - |
Streptomyces sp. K30 |
| 1.13.11.87 | Lcp | - |
Rhodococcus rhodochrous |
| 1.13.11.87 | Lcp | - |
Nocardia farcinica |
| 1.13.11.87 | Lcp | - |
Gordonia polyisoprenivorans |
| 1.13.11.87 | Lcp | - |
Streptomyces sp. K30 |
| 1.13.11.87 | RoxB | - |
Rhizobacter gummiphilus |
| 1.13.11.87 | rubber oxygenase B | - |
Rhizobacter gummiphilus |
Cofactor
| EC Number | Cofactor | Comment | Organism | Structure |
|---|---|---|---|---|
| 1.13.11.85 | heme | c-type diheme protein | Corallococcus coralloides | |
| 1.13.11.85 | heme | c-type diheme protein | Haliangium ochraceum | |
| 1.13.11.85 | heme | c-type diheme protein | Rhizobacter gummiphilus | |
| 1.13.11.85 | heme | c-type diheme protein | Myxococcus fulvus | |
| 1.13.11.85 | heme | c-type diheme protein | Steroidobacter cummioxidans | |
| 1.13.11.87 | heme | heme-containing enzyme | Rhizobacter gummiphilus | |
| 1.13.11.87 | heme | b-type monoheme protein | Rhodococcus rhodochrous | |
| 1.13.11.87 | heme | b-type monoheme protein | Nocardia farcinica | |
| 1.13.11.87 | heme | b-type monoheme protein | Gordonia polyisoprenivorans | |
| 1.13.11.87 | heme | b-type monoheme protein | Streptomyces sp. K30 | |
General Information
| EC Number | General Information | Comment | Organism |
|---|---|---|---|
| 1.13.11.87 | metabolism | the synergistic action of the two rubber oxygenases RoxANS21 and RoxBNS21 enables the species to grow on polyisoprene latex as the sole source of carbon and energy | Rhizobacter gummiphilus |
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