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Literature summary extracted from

  • Lee, H.S.; Cho, Y.; Kim, Y.J.; Nam, K.; Lee, J.H.; Kang, S.G.
    Biochemical characterization of deblocking aminopeptidase from hyperthermophilic archaeon Thermococcus onnurineus NA1 (2007), J. Biosci. Bioeng., 104, 188-194.
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
3.4.11.B5 expression in Escherichia coli Thermococcus onnurineus

Inhibitors

EC Number Inhibitors Comment Organism Structure
3.4.11.B5 Cu2+ 0.5 mM Thermococcus onnurineus
3.4.11.B5 EDTA 0.5 mM, complete inhibition Thermococcus onnurineus
3.4.11.B5 Mn2+ 0.5 mM Thermococcus onnurineus
3.4.11.B5 Ni2+ 0.5 mM Thermococcus onnurineus
3.4.11.B5 Zn2+ 0.5 mM, complete inhibition Thermococcus onnurineus

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
3.4.11.B5 0.2
-
L-methionyl 4-nitroanilide pH 7.5, 80°C Thermococcus onnurineus
3.4.11.B5 0.8
-
L-leucyl 4-nitroanilide pH 7.5, 80°C Thermococcus onnurineus
3.4.11.B5 1.1
-
N-acetyl-L-leucyl 4-nitroanilide pH 7.5, 80°C Thermococcus onnurineus

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
3.4.11.B5 Co2+ 0.5 mM Co2+ stimulates activity 4.8fold, the enzyme contains 0.09 mol of Co2+ per mol of monomer Thermococcus onnurineus
3.4.11.B5 NaCl stimulates, optimal cobcentration Thermococcus onnurineus

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
3.4.11.B5 37900
-
x * 37900, His-tagged enzyme, SDS-PAGE Thermococcus onnurineus
3.4.11.B5 71000
-
dimeric form prevalent in presence of 0.1 mM Co2+, gel filtration Thermococcus onnurineus
3.4.11.B5 600000
-
oligomeric form prevalent in absence of Co2+, gel filtration Thermococcus onnurineus

Organism

EC Number Organism UniProt Comment Textmining
3.4.11.B5 Thermococcus onnurineus
-
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
3.4.11.B5
-
Thermococcus onnurineus

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.4.11.B5 L-leucyl 4-nitroanilide + H2O catalytic efficiency for hydrolysis of Leu-4-nitroanilide is 105fold higher than catalytic efficiency for hydrolysis of acetyl-Leu-4-nitroanilide Thermococcus onnurineus L-leucine + 4-nitroaniline
-
?
3.4.11.B5 L-methionyl 4-nitroanilide + H2O
-
Thermococcus onnurineus L-methionine + 4-nitroaniline
-
?
3.4.11.B5 N-acetyl-L-leucyl 4-nitroanilide + H2O catalytic efficiency for hydrolysis of Leu-4-nitroanilide is 105fold higher than catalytic efficiency for hydrolysis of acetyl-Leu-4-nitroanilide Thermococcus onnurineus N-acetyl-L-leucine + 4-nitroaniline
-
?

Subunits

EC Number Subunits Comment Organism
3.4.11.B5 ? x * 37900, His-tagged enzyme, SDS-PAGE Thermococcus onnurineus

Synonyms

EC Number Synonyms Comment Organism
3.4.11.B5 deblocking aminopeptidase ambiguous Thermococcus onnurineus
3.4.11.B5 TNA1-DAP
-
Thermococcus onnurineus

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
3.4.11.B5 90 100
-
Thermococcus onnurineus

Temperature Range [°C]

EC Number Temperature Minimum [°C] Temperature Maximum [°C] Comment Organism
3.4.11.B5 70 100 70°C: about 35% of maximal activity, 90-100°C: optimum Thermococcus onnurineus

Temperature Stability [°C]

EC Number Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
3.4.11.B5 96
-
1 h, t1/2 is less than 10 min in 50 mM HEPES buffer (pH 7.5) in absence of CoCl2, stable for at least 1 h in presence of 0.1 mM CoCl2 Thermococcus onnurineus

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
3.4.11.B5 0.5
-
N-acetyl-L-leucyl 4-nitroanilide pH 7.5, 80°C Thermococcus onnurineus
3.4.11.B5 10.9
-
L-methionyl 4-nitroanilide pH 7.5, 80°C Thermococcus onnurineus
3.4.11.B5 37.5
-
L-leucyl 4-nitroanilide pH 7.5, 80°C Thermococcus onnurineus

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
3.4.11.B5 7.5
-
-
Thermococcus onnurineus

pH Range

EC Number pH Minimum pH Maximum Comment Organism
3.4.11.B5 6.5 8 pH 6.5: about 50% of maximal activity, pH 8.5: about 70% of maximal activity (HEPES buffer), about 40% of maximal activity (Tris-HCl buffer) Thermococcus onnurineus

kcat/KM [mM/s]

EC Number kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
3.4.11.B5 0.45
-
N-acetyl-L-leucyl 4-nitroanilide pH 7.5, 80°C Thermococcus onnurineus
3.4.11.B5 47
-
L-leucyl 4-nitroanilide pH 7.5, 80°C Thermococcus onnurineus
3.4.11.B5 55
-
L-methionyl 4-nitroanilide pH 7.5, 80°C Thermococcus onnurineus