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Literature summary extracted from

  • Koudelakova, T.; Chovancova, E.; Brezovsky, J.; Monincova, M.; Fortova, A.; Jarkovsky, J.; Damborsky, J.
    Substrate specificity of haloalkane dehalogenases (2011), Biochem. J., 435, 345-354.
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
3.8.1.5 gene datA, phylogenetic analysis Agrobacterium tumefaciens
3.8.1.5 gene dbeA, phylogenetic analysis Bradyrhizobium elkanii
3.8.1.5 gene dbjA, phylogenetic analysis Bradyrhizobium japonicum
3.8.1.5 gene dhaA, phylogenetic analysis Rhodococcus rhodochrous
3.8.1.5 gene dhlA, phylogenetic analysis Xanthobacter autotrophicus
3.8.1.5 gene drbA, phylogenetic analysis Rhodopirellula baltica
3.8.1.5 gene linB, phylogenetic analysis Sphingobium indicum
3.8.1.5 genes dmbA and dmbC, phylogenetic analysis Mycobacterium tuberculosis variant bovis

Organism

EC Number Organism UniProt Comment Textmining
3.8.1.5 Agrobacterium tumefaciens
-
gene datA
-
3.8.1.5 Agrobacterium tumefaciens C58 / ATCC 33970
-
gene datA
-
3.8.1.5 Bradyrhizobium elkanii
-
gene dbeA
-
3.8.1.5 Bradyrhizobium elkanii USDA94
-
gene dbeA
-
3.8.1.5 Bradyrhizobium japonicum
-
gene dbjA
-
3.8.1.5 Bradyrhizobium japonicum USDA 110
-
gene dbjA
-
3.8.1.5 Mycobacterium tuberculosis variant bovis
-
genes dmbA and dmbC
-
3.8.1.5 Mycobacterium tuberculosis variant bovis 5033/66
-
genes dmbA and dmbC
-
3.8.1.5 Rhodococcus rhodochrous
-
gene dhaA
-
3.8.1.5 Rhodococcus rhodochrous NCIMB 13064
-
gene dhaA
-
3.8.1.5 Rhodopirellula baltica
-
gene drbA
-
3.8.1.5 Rhodopirellula baltica SH1
-
gene drbA
-
3.8.1.5 Sphingobium indicum
-
gene linB
-
3.8.1.5 Sphingobium indicum UT26
-
gene linB
-
3.8.1.5 Xanthobacter autotrophicus
-
gene dhlA
-
3.8.1.5 Xanthobacter autotrophicus GJ10
-
gene dhlA
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.8.1.5 1,2,3-trichloropropane + H2O
-
Bradyrhizobium japonicum ?
-
?
3.8.1.5 1,2,3-trichloropropane + H2O
-
Bradyrhizobium japonicum USDA 110 ?
-
?
3.8.1.5 1,2-dichloroethane + H2O high activity Xanthobacter autotrophicus ?
-
?
3.8.1.5 1,2-dichloroethane + H2O high activity Xanthobacter autotrophicus GJ10 ?
-
?
3.8.1.5 1,2-dichloropropane + H2O
-
Bradyrhizobium japonicum ?
-
?
3.8.1.5 1,2-dichloropropane + H2O
-
Bradyrhizobium japonicum USDA 110 ?
-
?
3.8.1.5 1,3-dichloropropane + H2O high activity Xanthobacter autotrophicus ?
-
?
3.8.1.5 1,3-dichloropropane + H2O high activity Xanthobacter autotrophicus GJ10 ?
-
?
3.8.1.5 1-chloro-2-(2-chloroethoxy)ethane + H2O
-
Mycobacterium tuberculosis variant bovis ?
-
?
3.8.1.5 1-chloro-2-(2-chloroethoxy)ethane + H2O
-
Mycobacterium tuberculosis variant bovis 5033/66 ?
-
?
3.8.1.5 1-chlorobutane + H2O
-
Bradyrhizobium japonicum 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Rhodococcus rhodochrous 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Agrobacterium tumefaciens 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Mycobacterium tuberculosis variant bovis 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Xanthobacter autotrophicus 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Sphingobium indicum 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Rhodopirellula baltica 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Bradyrhizobium elkanii 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Bradyrhizobium japonicum USDA 110 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Agrobacterium tumefaciens C58 / ATCC 33970 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Rhodococcus rhodochrous NCIMB 13064 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Bradyrhizobium elkanii USDA94 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Rhodopirellula baltica SH1 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Xanthobacter autotrophicus GJ10 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Sphingobium indicum UT26 1-butanol + chloride
-
?
3.8.1.5 1-chlorobutane + H2O
-
Mycobacterium tuberculosis variant bovis 5033/66 1-butanol + chloride
-
?
3.8.1.5 1-iodobutane + H2O
-
Bradyrhizobium japonicum 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Rhodococcus rhodochrous 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Agrobacterium tumefaciens 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Mycobacterium tuberculosis variant bovis 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Xanthobacter autotrophicus 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Sphingobium indicum 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Rhodopirellula baltica 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Bradyrhizobium elkanii 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Bradyrhizobium japonicum USDA 110 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Agrobacterium tumefaciens C58 / ATCC 33970 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Rhodococcus rhodochrous NCIMB 13064 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Bradyrhizobium elkanii USDA94 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Rhodopirellula baltica SH1 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Xanthobacter autotrophicus GJ10 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Sphingobium indicum UT26 1-butanol + iodide
-
?
3.8.1.5 1-iodobutane + H2O
-
Mycobacterium tuberculosis variant bovis 5033/66 1-butanol + iodide
-
?
3.8.1.5 2-bromo-1-chloropropane + H2O high activity Bradyrhizobium japonicum ?
-
?
3.8.1.5 2-iodobutane + H2O
-
Mycobacterium tuberculosis variant bovis 2-butanol + iodide
-
?
3.8.1.5 2-iodobutane + H2O
-
Mycobacterium tuberculosis variant bovis 5033/66 2-butanol + iodide
-
?
3.8.1.5 chlorocyclopentane + H2O high activity Bradyrhizobium japonicum cyclopentanol + chloride
-
?
3.8.1.5 chlorocyclopentane + H2O
-
Mycobacterium tuberculosis variant bovis hydroxycyclopentane + chloride
-
?
3.8.1.5 additional information substrate specificity, overview Bradyrhizobium japonicum ?
-
?
3.8.1.5 additional information substrate specificity, overview Rhodococcus rhodochrous ?
-
?
3.8.1.5 additional information substrate specificity, overview Agrobacterium tumefaciens ?
-
?
3.8.1.5 additional information substrate specificity, overview Mycobacterium tuberculosis variant bovis ?
-
?
3.8.1.5 additional information substrate specificity, overview Xanthobacter autotrophicus ?
-
?
3.8.1.5 additional information substrate specificity, overview Sphingobium indicum ?
-
?
3.8.1.5 additional information substrate specificity, overview Rhodopirellula baltica ?
-
?
3.8.1.5 additional information substrate specificity, overview Bradyrhizobium elkanii ?
-
?
3.8.1.5 additional information substrate specificity, overview Bradyrhizobium japonicum USDA 110 ?
-
?
3.8.1.5 additional information substrate specificity, overview Agrobacterium tumefaciens C58 / ATCC 33970 ?
-
?
3.8.1.5 additional information substrate specificity, overview Rhodococcus rhodochrous NCIMB 13064 ?
-
?
3.8.1.5 additional information substrate specificity, overview Bradyrhizobium elkanii USDA94 ?
-
?
3.8.1.5 additional information substrate specificity, overview Rhodopirellula baltica SH1 ?
-
?
3.8.1.5 additional information substrate specificity, overview Xanthobacter autotrophicus GJ10 ?
-
?
3.8.1.5 additional information substrate specificity, overview Sphingobium indicum UT26 ?
-
?
3.8.1.5 additional information substrate specificity, overview Mycobacterium tuberculosis variant bovis 5033/66 ?
-
?

Synonyms

EC Number Synonyms Comment Organism
3.8.1.5 DatA
-
Agrobacterium tumefaciens
3.8.1.5 DbeA
-
Bradyrhizobium elkanii
3.8.1.5 DbjA
-
Bradyrhizobium japonicum
3.8.1.5 DhaA
-
Rhodococcus rhodochrous
3.8.1.5 DhlA
-
Xanthobacter autotrophicus
3.8.1.5 dmbA
-
Mycobacterium tuberculosis variant bovis
3.8.1.5 DmbC
-
Mycobacterium tuberculosis variant bovis
3.8.1.5 DrbA
-
Rhodopirellula baltica
3.8.1.5 HLD
-
Bradyrhizobium japonicum
3.8.1.5 HLD
-
Rhodococcus rhodochrous
3.8.1.5 HLD
-
Agrobacterium tumefaciens
3.8.1.5 HLD
-
Mycobacterium tuberculosis variant bovis
3.8.1.5 HLD
-
Xanthobacter autotrophicus
3.8.1.5 HLD
-
Sphingobium indicum
3.8.1.5 HLD
-
Rhodopirellula baltica
3.8.1.5 HLD
-
Bradyrhizobium elkanii
3.8.1.5 LinB
-
Sphingobium indicum

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
3.8.1.5 37
-
assay at Bradyrhizobium japonicum
3.8.1.5 37
-
assay at Rhodococcus rhodochrous
3.8.1.5 37
-
assay at Agrobacterium tumefaciens
3.8.1.5 37
-
assay at Mycobacterium tuberculosis variant bovis
3.8.1.5 37
-
assay at Xanthobacter autotrophicus
3.8.1.5 37
-
assay at Sphingobium indicum
3.8.1.5 37
-
assay at Rhodopirellula baltica
3.8.1.5 37
-
assay at Bradyrhizobium elkanii

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
3.8.1.5 8.6
-
assay at Bradyrhizobium japonicum
3.8.1.5 8.6
-
assay at Rhodococcus rhodochrous
3.8.1.5 8.6
-
assay at Agrobacterium tumefaciens
3.8.1.5 8.6
-
assay at Mycobacterium tuberculosis variant bovis
3.8.1.5 8.6
-
assay at Xanthobacter autotrophicus
3.8.1.5 8.6
-
assay at Sphingobium indicum
3.8.1.5 8.6
-
assay at Rhodopirellula baltica
3.8.1.5 8.6
-
assay at Bradyrhizobium elkanii

General Information

EC Number General Information Comment Organism
3.8.1.5 evolution comparison and classification of the substrate specificities of nine members of the HLD family, functional classification compared with one derived on the basis of the enzymes' evolutionary relationships, overview Bradyrhizobium japonicum
3.8.1.5 evolution comparison and classification of the substrate specificities of nine members of the HLD family, functional classification compared with one derived on the basis of the enzymes' evolutionary relationships, overview Rhodococcus rhodochrous
3.8.1.5 evolution comparison and classification of the substrate specificities of nine members of the HLD family, functional classification compared with one derived on the basis of the enzymes' evolutionary relationships, overview Agrobacterium tumefaciens
3.8.1.5 evolution comparison and classification of the substrate specificities of nine members of the HLD family, functional classification compared with one derived on the basis of the enzymes' evolutionary relationships, overview Mycobacterium tuberculosis variant bovis
3.8.1.5 evolution comparison and classification of the substrate specificities of nine members of the HLD family, functional classification compared with one derived on the basis of the enzymes' evolutionary relationships, overview Xanthobacter autotrophicus
3.8.1.5 evolution comparison and classification of the substrate specificities of nine members of the HLD family, functional classification compared with one derived on the basis of the enzymes' evolutionary relationships, overview Sphingobium indicum
3.8.1.5 evolution comparison and classification of the substrate specificities of nine members of the HLD family, functional classification compared with one derived on the basis of the enzymes' evolutionary relationships, overview Rhodopirellula baltica
3.8.1.5 evolution comparison and classification of the substrate specificities of nine members of the HLD family, functional classification compared with one derived on the basis of the enzymes' evolutionary relationships, overview Bradyrhizobium elkanii