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Literature summary extracted from

  • Kim, B.; Singh, S.P.; Hayashi, K.
    Characteristics of chimeric enzymes constructed between Thermotoga maritima and Agrobacterium tumefaciens beta-glucosidases: role of C-terminal domain in catalytic activity (2006), Enzyme Microb. Technol., 38, 952-959.
No PubMed abstract available

Cloned(Commentary)

EC Number Cloned (Comment) Organism
3.2.1.21 gene bglb, DNA and amino acid sequence determination and anaylsis, expression of N-terminally His-tagged wild-type and chimeric mutant enzymes in Escherichia coli Thermotoga maritima
3.2.1.21 gene cbg1, DNA and amino acid sequence determination and anaylsis, expression of N-terminally His-tagged wild-type and chimeric mutant enzymes in Escherichia coli Agrobacterium tumefaciens

Protein Variants

EC Number Protein Variants Comment Organism
3.2.1.21 additional information construction of chimeric enzymes between Thermotoga maritima and Agrobacterium tumefaciens beta-glucosidases, three chimeric genes are constructed by shuffling at three selected regions, only two chimeric enzymes are active and show altered properties, e.g. decreased thermal stability, pH optima, and kinetics, overview Agrobacterium tumefaciens
3.2.1.21 additional information construction of chimeric enzymes between Thermotoga maritima and Agrobacterium tumefaciens beta-glucosidases, three chimeric genes are constructed by shuffling at three selected regions, only two chimeric enzymes are active and show altered properties, e.g. decreased thermal stability, pH optima, and kinetics, overview Thermotoga maritima

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
3.2.1.21 0.0039
-
4-nitrophenyl-beta-D-glucopyranoside pH 6.5, 30°C, wild-type enzyme Thermotoga maritima
3.2.1.21 0.005
-
4-nitrophenyl-beta-D-xylopyranoside pH 6.5, 30°C, wild-type enzyme Agrobacterium tumefaciens
3.2.1.21 0.012
-
4-nitrophenyl-beta-D-glucopyranoside pH 6.5, 30°C, wild-type enzyme Agrobacterium tumefaciens
3.2.1.21 0.08
-
4-nitrophenyl-beta-D-fucopyranoside pH 6.5, 30°C, wild-type enzyme Agrobacterium tumefaciens
3.2.1.21 0.24
-
4-nitrophenyl-alpha-L-arabinopyranoside pH 6.5, 30°C, wild-type enzyme Agrobacterium tumefaciens
3.2.1.21 2.64
-
4-nitrophenyl-beta-D-xylopyranoside pH 6.5, 30°C, wild-type enzyme Thermotoga maritima
3.2.1.21 18.9
-
4-nitrophenyl-alpha-L-arabinopyranoside pH 6.5, 30°C, wild-type enzyme Thermotoga maritima
3.2.1.21 42.7
-
4-nitrophenyl-beta-D-fucopyranoside pH 6.5, 30°C, wild-type enzyme Thermotoga maritima

Organism

EC Number Organism UniProt Comment Textmining
3.2.1.21 Agrobacterium tumefaciens
-
gene cbg1
-
3.2.1.21 Agrobacterium tumefaciens B3/73
-
gene cbg1
-
3.2.1.21 Thermotoga maritima
-
gene bglb
-
3.2.1.21 Thermotoga maritima MSB8 / DSM 3109 / ATCC 43589
-
gene bglb
-

Purification (Commentary)

EC Number Purification (Comment) Organism
3.2.1.21 recombinant N-terminally His-tagged wild-type and chimeric mutant enzymes from Escherichia coli by nickel affinity chromatography Agrobacterium tumefaciens
3.2.1.21 recombinant N-terminally His-tagged wild-type and chimeric mutant enzymes from Escherichia coli by nickel affinity chromatography Thermotoga maritima

Specific Activity [micromol/min/mg]

EC Number Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
3.2.1.21 additional information
-
substrate specificity of wild-type and chimeric mutant enzymes, overview Agrobacterium tumefaciens
3.2.1.21 additional information
-
substrate specificity of wild-type and chimeric mutant enzymes, overview Thermotoga maritima

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.2.1.21 4-nitrophenyl beta-D-fucopyranoside + H2O
-
Agrobacterium tumefaciens 4-nitrophenol + beta-D-fucose
-
?
3.2.1.21 4-nitrophenyl beta-D-fucopyranoside + H2O
-
Thermotoga maritima 4-nitrophenol + beta-D-fucose
-
?
3.2.1.21 4-nitrophenyl beta-D-fucopyranoside + H2O
-
Agrobacterium tumefaciens B3/73 4-nitrophenol + beta-D-fucose
-
?
3.2.1.21 4-nitrophenyl beta-D-fucopyranoside + H2O
-
Thermotoga maritima MSB8 / DSM 3109 / ATCC 43589 4-nitrophenol + beta-D-fucose
-
?
3.2.1.21 4-nitrophenyl beta-D-glucopyranoside + H2O
-
Agrobacterium tumefaciens 4-nitrophenol + beta-D-glucose
-
?
3.2.1.21 4-nitrophenyl beta-D-glucopyranoside + H2O
-
Thermotoga maritima 4-nitrophenol + beta-D-glucose
-
?
3.2.1.21 4-nitrophenyl beta-D-glucopyranoside + H2O
-
Agrobacterium tumefaciens B3/73 4-nitrophenol + beta-D-glucose
-
?
3.2.1.21 4-nitrophenyl beta-D-glucopyranoside + H2O
-
Thermotoga maritima MSB8 / DSM 3109 / ATCC 43589 4-nitrophenol + beta-D-glucose
-
?
3.2.1.21 4-nitrophenyl beta-D-xylopyranoside + H2O
-
Agrobacterium tumefaciens 4-nitrophenol + beta-D-xylose
-
?
3.2.1.21 4-nitrophenyl beta-D-xylopyranoside + H2O
-
Thermotoga maritima 4-nitrophenol + beta-D-xylose
-
?
3.2.1.21 4-nitrophenyl beta-D-xylopyranoside + H2O
-
Agrobacterium tumefaciens B3/73 4-nitrophenol + beta-D-xylose
-
?
3.2.1.21 4-nitrophenyl beta-D-xylopyranoside + H2O
-
Thermotoga maritima MSB8 / DSM 3109 / ATCC 43589 4-nitrophenol + beta-D-xylose
-
?
3.2.1.21 4-nitrophenyl-alpha-L-arabinopyranoside + H2O
-
Agrobacterium tumefaciens 4-nitrophenol + alpha-L-arabinose
-
?
3.2.1.21 4-nitrophenyl-alpha-L-arabinopyranoside + H2O
-
Thermotoga maritima 4-nitrophenol + alpha-L-arabinose
-
?
3.2.1.21 4-nitrophenyl-alpha-L-arabinopyranoside + H2O
-
Agrobacterium tumefaciens B3/73 4-nitrophenol + alpha-L-arabinose
-
?
3.2.1.21 4-nitrophenyl-alpha-L-arabinopyranoside + H2O
-
Thermotoga maritima MSB8 / DSM 3109 / ATCC 43589 4-nitrophenol + alpha-L-arabinose
-
?
3.2.1.21 additional information substrate specificity of wild-type and chimeric mutant enzymes, overview Agrobacterium tumefaciens ?
-
?
3.2.1.21 additional information substrate specificity of wild-type and chimeric mutant enzymes, overview Thermotoga maritima ?
-
?
3.2.1.21 additional information substrate specificity of wild-type and chimeric mutant enzymes, overview Agrobacterium tumefaciens B3/73 ?
-
?
3.2.1.21 additional information substrate specificity of wild-type and chimeric mutant enzymes, overview Thermotoga maritima MSB8 / DSM 3109 / ATCC 43589 ?
-
?

Synonyms

EC Number Synonyms Comment Organism
3.2.1.21 More the enzyme belongs to the glycosyl hydrolase family 3 Agrobacterium tumefaciens
3.2.1.21 More the enzyme belongs to the glycosyl hydrolase family 3 Thermotoga maritima

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
3.2.1.21 65
-
-
Agrobacterium tumefaciens
3.2.1.21 85
-
-
Thermotoga maritima

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
3.2.1.21 6.4
-
4-nitrophenyl-beta-D-glucopyranoside pH 6.5, 30°C, wild-type enzyme Thermotoga maritima
3.2.1.21 9
-
4-nitrophenyl-alpha-L-arabinopyranoside pH 6.5, 30°C, wild-type enzyme Thermotoga maritima
3.2.1.21 18.4
-
4-nitrophenyl-beta-D-xylopyranoside pH 6.5, 30°C, wild-type enzyme Thermotoga maritima
3.2.1.21 22.1
-
4-nitrophenyl-beta-D-fucopyranoside pH 6.5, 30°C, wild-type enzyme Agrobacterium tumefaciens
3.2.1.21 27.7
-
4-nitrophenyl-beta-D-fucopyranoside pH 6.5, 30°C, wild-type enzyme Thermotoga maritima
3.2.1.21 28.9
-
4-nitrophenyl-beta-D-xylopyranoside pH 6.5, 30°C, wild-type enzyme Agrobacterium tumefaciens
3.2.1.21 95.4
-
4-nitrophenyl-beta-D-glucopyranoside pH 6.5, 30°C, wild-type enzyme Agrobacterium tumefaciens
3.2.1.21 119
-
4-nitrophenyl-alpha-L-arabinopyranoside pH 6.5, 30°C, wild-type enzyme Agrobacterium tumefaciens

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
3.2.1.21 3.2 3.5
-
Thermotoga maritima
3.2.1.21 6.5 8
-
Agrobacterium tumefaciens

pH Stability

EC Number pH Stability pH Stability Maximum Comment Organism
3.2.1.21 3.5 11
-
Thermotoga maritima