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Literature summary extracted from

  • Shibata, H.S.; Minagawa, A.; Takaku, H.; Takagi, M.; Nashimoto, M.
    Unstructured RNA is a substrate for tRNase Z (2006), Biochemistry, 45, 5486-5492.
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
3.1.26.11 expression in Escherichia coli Bacillus subtilis
3.1.26.11 expression in Escherichia coli Escherichia coli
3.1.26.11 expression in Escherichia coli Homo sapiens
3.1.26.11 expression in Escherichia coli Saccharomyces cerevisiae
3.1.26.11 expression in Escherichia coli Thermotoga maritima
3.1.26.11 expression in Escherichia coli Pyrobaculum aerophilum

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
3.1.26.11 MgCl2 most active at 0-0.2 mM, weak activity above 3 mM Bacillus subtilis
3.1.26.11 MnCl2 most active at 0.05 mM Thermotoga maritima
3.1.26.11 MnCl2 most active at 1-5 mM Bacillus subtilis

Organism

EC Number Organism UniProt Comment Textmining
3.1.26.11 Bacillus subtilis
-
-
-
3.1.26.11 Escherichia coli
-
-
-
3.1.26.11 Homo sapiens
-
-
-
3.1.26.11 Pyrobaculum aerophilum
-
-
-
3.1.26.11 Saccharomyces cerevisiae
-
-
-
3.1.26.11 Sus scrofa
-
-
-
3.1.26.11 Thermotoga maritima
-
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
3.1.26.11
-
 Bacillus subtilis
3.1.26.11
-
 Escherichia coli
3.1.26.11
-
 Homo sapiens
3.1.26.11
-
 Saccharomyces cerevisiae
3.1.26.11
-
 Thermotoga maritima
3.1.26.11
-
 Pyrobaculum aerophilum

Source Tissue

EC Number Source Tissue Comment Organism Textmining
3.1.26.11 cell culture
-
 Bacillus subtilis
-
3.1.26.11 cell culture
-
 Escherichia coli
-
3.1.26.11 cell culture
-
 Homo sapiens
-
3.1.26.11 cell culture
-
 Saccharomyces cerevisiae
-
3.1.26.11 cell culture
-
 Thermotoga maritima
-
3.1.26.11 cell culture
-
 Pyrobaculum aerophilum
-
3.1.26.11 liver
-
 Sus scrofa
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.1.26.11 usRNA1 + H2O 24 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA1 + H2O 24 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA1 + H2O 24 nt unstructured RNA Homo sapiens ?
-
 ?
3.1.26.11 usRNA1 + H2O 24 nt unstructured RNA Sus scrofa ?
-
 ?
3.1.26.11 usRNA1 + H2O 24 nt unstructured RNA Saccharomyces cerevisiae ?
-
 ?
3.1.26.11 usRNA1 + H2O 24 nt unstructured RNA Thermotoga maritima ?
-
 ?
3.1.26.11 usRNA1 + H2O 24 nt unstructured RNA, no cleavage observed Pyrobaculum aerophilum ?
-
 ?
3.1.26.11 usRNA10 + H2O 40 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA10 + H2O 40 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA10 + H2O 40 nt unstructured RNA Thermotoga maritima ?
-
 ?
3.1.26.11 usRNA2 + H2O 24 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA2 + H2O 24 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA2 + H2O 24 nt unstructured RNA Thermotoga maritima ?
-
 ?
3.1.26.11 usRNA3 + H2O 28 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA3 + H2O 28 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA3 + H2O 28 nt unstructured RNA Thermotoga maritima ?
-
 ?
3.1.26.11 usRNA4 + H2O 39 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA4 + H2O 39 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA4 + H2O 39 nt unstructured RNA Thermotoga maritima ?
-
 ?
3.1.26.11 usRNA5 + H2O 26 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA5 + H2O 26 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA5 + H2O 26 nt unstructured RNA Thermotoga maritima ?
-
 ?
3.1.26.11 usRNA6 + H2O 26 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA6 + H2O 26 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA6 + H2O 26 nt unstructured RNA Thermotoga maritima ?
-
 ?
3.1.26.11 usRNA7 + H2O 24 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA7 + H2O 24 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA7 + H2O 24 nt unstructured RNA Thermotoga maritima ?
-
 ?
3.1.26.11 usRNA8 + H2O 43 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA8 + H2O 43 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA8 + H2O 43 nt unstructured RNA Thermotoga maritima ?
-
 ?
3.1.26.11 usRNA9 + H2O 22 nt unstructured RNA Bacillus subtilis ?
-
 ?
3.1.26.11 usRNA9 + H2O 22 nt unstructured RNA Escherichia coli ?
-
 ?
3.1.26.11 usRNA9 + H2O 22 nt unstructured RNA Thermotoga maritima ?
-
 ?

Synonyms

EC Number Synonyms Comment Organism
3.1.26.11 3' tRNase
-
 Bacillus subtilis
3.1.26.11 3' tRNase
-
 Escherichia coli
3.1.26.11 3' tRNase
-
 Homo sapiens
3.1.26.11 3' tRNase
-
 Sus scrofa
3.1.26.11 3' tRNase
-
 Saccharomyces cerevisiae
3.1.26.11 3' tRNase
-
 Thermotoga maritima
3.1.26.11 3' tRNase
-
 Pyrobaculum aerophilum
3.1.26.11 tRNase Z
-
 Bacillus subtilis
3.1.26.11 tRNase Z
-
 Escherichia coli
3.1.26.11 tRNase Z
-
 Homo sapiens
3.1.26.11 tRNase Z
-
 Sus scrofa
3.1.26.11 tRNase Z
-
 Saccharomyces cerevisiae
3.1.26.11 tRNase Z
-
 Thermotoga maritima
3.1.26.11 tRNase Z
-
 Pyrobaculum aerophilum
3.1.26.11 tRnaseZL
-
 Homo sapiens
3.1.26.11 tRnaseZL
-
 Sus scrofa
3.1.26.11 tRnaseZL
-
 Saccharomyces cerevisiae
3.1.26.11 tRnaseZS
-
 Homo sapiens
3.1.26.11 tRnaseZS
-
 Pyrobaculum aerophilum