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Literature summary extracted from

  • Trulzsch, K.; Roggenkamp, A.; Pelludat, C.; Rakin, A.; Jacobi, C.A.; Heesemann, J.
    Cloning and characterization of the gene encoding periplasmic 2',3'-cyclic phosphodiesterase of Yersinia enterocolitica O:8 (2001), Microbiology, 147, 203-213.
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
3.1.4.16 cpdB gene, overexpression in Escherichia coli HB101, characterization of the gene Yersinia enterocolitica

Protein Variants

EC Number Protein Variants Comment Organism
3.1.4.16 additional information cpdB insertion mutant Yersinia enterocolitica

Localization

EC Number Localization Comment Organism GeneOntology No. Textmining
3.1.4.16 periplasm enzyme is exported to the periplasmic space Yersinia enterocolitica
-
-

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
3.1.4.16 68000
-
 x * 71958, CpdB including the N-terminal signal sequence, calculated from the amino acid sequence, x * 68000, mature peptide without the signal sequence, SDS-PAGE Yersinia enterocolitica
3.1.4.16 71958
-
 x * 71958, CpdB including the N-terminal signal sequence, calculated from the amino acid sequence, x * 68000, mature peptide without the signal sequence, SDS-PAGE Yersinia enterocolitica

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
3.1.4.16 additional information Yersinia enterocolitica CpdB may be a fitness factor involved in the salvage of nucleotides from the environment ?
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
3.1.4.16 Yersinia enterocolitica P53052 O:8 strains WA-C and WA-314
-

Posttranslational Modification

EC Number Posttranslational Modification Comment Organism
3.1.4.16 proteolytic modification contains an N-terminal signal sequence of 25 amino acids Yersinia enterocolitica

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.1.4.16 cyclic 2',3'-AMP + H2O
-
 Yersinia enterocolitica 3'-AMP
-
 ?
3.1.4.16 cyclic 2',3'-CMP + H2O
-
 Yersinia enterocolitica 3'-CMP
-
 ?
3.1.4.16 cyclic 2',3'-GMP + H2O
-
 Yersinia enterocolitica 3'-GMP
-
 ?
3.1.4.16 cyclic 2',3'-UMP + H2O
-
 Yersinia enterocolitica 3'-UMP
-
 ?
3.1.4.16 di(p-nitrophenyl) phosphate + H2O
-
 Yersinia enterocolitica p-nitrophenol + p-nitrophenyl phosphate
-
 ?
3.1.4.16 additional information bifunctional enzyme with 2’,3’-cyclic phosphodiesterase and 3’-nucleotidase activity Yersinia enterocolitica ?
-
 ?
3.1.4.16 additional information CpdB may be a fitness factor involved in the salvage of nucleotides from the environment Yersinia enterocolitica ?
-
 ?
3.1.4.16 nucleoside 2',3'-cyclic phosphate + H2O
-
 Yersinia enterocolitica nucleoside 3'-phosphate
-
 ?
3.1.4.16 p-nitrophenyl phosphorylcholine + H2O
-
 Yersinia enterocolitica ?
-
 ?

Subunits

EC Number Subunits Comment Organism
3.1.4.16 ? x * 71958, CpdB including the N-terminal signal sequence, calculated from the amino acid sequence, x * 68000, mature peptide without the signal sequence, SDS-PAGE Yersinia enterocolitica

Synonyms

EC Number Synonyms Comment Organism
3.1.4.16 CpdB
-
 Yersinia enterocolitica

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
3.1.4.16 37
-
 assay at Yersinia enterocolitica

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
3.1.4.16 7.8
-
 assay at Yersinia enterocolitica