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Literature summary extracted from

  • Read, B.A.; Tabita, F.R.
    High substrate specificity factor ribulose bisphosphate carboxylase/oxygenase from eukaryotic marine algae and properties of recombinant cyanobacterial rubisco containing algal residue modifications (1994), Arch. Biochem. Biophys., 312, 210-218.
    View publication on PubMed

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
4.1.1.39 0.0037
-
 D-ribulose 1,5-bisphosphate carboxylation Porphyridium purpureum
4.1.1.39 0.0078
-
 D-ribulose 1,5-bisphosphate carboxylation Cylindrotheca fusiformis
4.1.1.39 0.0087
-
 D-ribulose 1,5-bisphosphate carboxylation Cylindrotheca sp.
4.1.1.39 0.019
-
 D-ribulose 1,5-bisphosphate carboxylation Synechococcus sp.
4.1.1.39 0.022
-
 CO2
-
 Porphyridium purpureum
4.1.1.39 0.023
-
 D-ribulose 1,5-bisphosphate carboxylation Olisthodiscus luteus
4.1.1.39 0.031
-
 CO2
-
 Cylindrotheca sp.
4.1.1.39 0.036
-
 CO2
-
 Cylindrotheca fusiformis
4.1.1.39 0.059
-
 CO2
-
 Olisthodiscus luteus
4.1.1.39 0.167
-
 CO2
-
 Synechococcus sp.
4.1.1.39 0.529
-
 O2
-
 Synechococcus sp.
4.1.1.39 0.568
-
 O2
-
 Cylindrotheca fusiformis
4.1.1.39 0.692
-
 O2
-
 Olisthodiscus luteus
4.1.1.39 1.292
-
 O2
-
 Cylindrotheca sp.
4.1.1.39 1.574
-
 O2
-
 Porphyridium purpureum

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Spinacia oleracea
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Synechococcus sp.
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Olisthodiscus luteus
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Cryptomonas sp.
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Cylindrotheca fusiformis
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Cylindrotheca sp.
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Porphyridium purpureum
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Cylindrotheca sp. N1
-
 ?
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.39 Cryptomonas sp.
-
-
-
4.1.1.39 Cylindrotheca fusiformis
-
-
-
4.1.1.39 Cylindrotheca sp.
-
 N1
-
4.1.1.39 Cylindrotheca sp. N1
-
 N1
-
4.1.1.39 Olisthodiscus luteus
-
-
-
4.1.1.39 Porphyridium purpureum
-
-
-
4.1.1.39 Spinacia oleracea
-
 spinach
-
4.1.1.39 Synechococcus sp.
-
 PCC 6301
-

Purification (Commentary)

EC Number Purification (Comment) Organism
4.1.1.39
-
 Spinacia oleracea
4.1.1.39
-
 Synechococcus sp.
4.1.1.39
-
 Olisthodiscus luteus
4.1.1.39
-
 Cylindrotheca fusiformis
4.1.1.39
-
 Cylindrotheca sp.

Reaction

EC Number Reaction Comment Organism Reaction ID
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Spinacia oleracea
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Synechococcus sp.
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Olisthodiscus luteus
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Cryptomonas sp.
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Cylindrotheca fusiformis
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Cylindrotheca sp.
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Porphyridium purpureum
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Spinacia oleracea
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Synechococcus sp.
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Olisthodiscus luteus
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Cylindrotheca fusiformis
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Cylindrotheca sp.
a

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Spinacia oleracea D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Synechococcus sp. D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Olisthodiscus luteus D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Cryptomonas sp. D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Cylindrotheca fusiformis D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Cylindrotheca sp. D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Porphyridium purpureum D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Cylindrotheca sp. N1 D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Spinacia oleracea ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Synechococcus sp. ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Olisthodiscus luteus ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Cryptomonas sp. ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Cylindrotheca fusiformis ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Cylindrotheca sp. ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Porphyridium purpureum ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Cylindrotheca sp. N1 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Spinacia oleracea D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Synechococcus sp. D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Olisthodiscus luteus D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Cylindrotheca fusiformis D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Cylindrotheca sp. D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Cylindrotheca sp. N1 D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
4.1.1.39 0.78
-
 CO2
-
 Cylindrotheca sp.
4.1.1.39 0.83
-
 CO2
-
 Olisthodiscus luteus
4.1.1.39 1.59
-
 CO2
-
 Porphyridium purpureum
4.1.1.39 1.95
-
 CO2
-
 Cylindrotheca fusiformis
4.1.1.39 3.71
-
 CO2
-
 Synechococcus sp.