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Literature summary for 3.4.21.B60 extracted from

  • Salleh, M.Z.; Deris, Z.Z.
    In silico molecular characterization of human TMPRSS2 protease polymorphic variants and associated SARS-CoV-2 susceptibility (2022), Life, 12, 231 .
    View publication on PubMedView publication on EuropePMC

Crystallization (Commentary)

Crystallization (Comment) Organism
in silico binding analysis and molecular docking between TMPRSS2 and SARS-CoV-2 spike protein. TMPRSS2 binds in close proximity to two cleavage sites of the spike glycoprotein. Inhibitor camostat mesylate binds to the central cleft of TMPRSS2 via hydrogen bonding interactions with the residues C281, C297, V280, S436, W461 and G462. Inhibitor nafamostat forms 3 hydrogen bonds Homo sapiens

Protein Variants

Protein Variants Comment Organism
C297S mutant is predicted to show altered interactions with the inhibitors, camostat mesylate and nafamostat Homo sapiens
G462D variant is predicted to be less susceptible to the SARS-CoV-2 infection and to show altered interactions with the inhibitors, camostat mesylate and nafamostat Homo sapiens
G462S variant is predicted to be less susceptible to the SARS-CoV-2 infection Homo sapiens
Q438E mutation is predicted to increase susceptibility to the SARS-CoV-2 infection Homo sapiens
S339F mutation is predicted to increase susceptibility to the SARS-CoV-2 infection Homo sapiens
S460R mutant is predicted to show altered interactions with the inhibitors, camostat mesylate and nafamostat Homo sapiens

Inhibitors

Inhibitors Comment Organism Structure
camostat mesylate
-
Homo sapiens
Nafamostat
-
Homo sapiens

Organism

Organism UniProt Comment Textmining
Homo sapiens O15393
-
-