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Literature summary for 3.2.1.171 extracted from

  • Hu, Y.; Kim, S.; Jeon, J.; Elfstrand, M.; Stenlid, J.; Lee, Y.; Olson, A.
    Characterization of a Heterobasidion irregulare endo-rhamnogalacturonase that mediate growth on pectin (2018), J. Phytopathol., 166, 34-43 .
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Cloned(Commentary)

Cloned (Comment) Organism
gene HIRHG, phylogenetic analysis, recombinant expression in Magnaporthe oryzae strain KJ201 Heterobasidion irregulare

Protein Variants

Protein Variants Comment Organism
additional information heterologous expression of the HIRHG gene in the hemibiotrophic fungus Magnaporthe oryzae increases its capacity to grow on pectin, but the transformed Magnaporthe oryzae isolates show significant less infection of rice leaves (from Oryza sativa cv. Nakdongbyeo) compared to the wild-type Heterobasidion irregulare

Organism

Organism UniProt Comment Textmining
Heterobasidion irregulare
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Heterobasidion irregulare TC32-1
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Source Tissue

Source Tissue Comment Organism Textmining
additional information Heterobasidion irregulare is a conifer pathogen. Gene HIRHG is highly upregulated during necrotrophic infection of Norway spruce compared with growth in liquid culture, the HIRHG encoded protein is produced during fungal growth on complex carbon sources Heterobasidion irregulare
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Synonyms

Synonyms Comment Organism
endo-rhamnogalacturonase
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 Heterobasidion irregulare
HIRHG
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 Heterobasidion irregulare

Expression

Organism Comment Expression
Heterobasidion irregulare gene HIRHG is highly upregulated during necrotrophic infection of Norway spruce compared with growth in liquid culture up

General Information

General Information Comment Organism
evolution the enzyme belongs to the glycosyl hydrolase family 28, GH28. Phylogenetic analysis of endo-rhamnogalacturonases reveals that rhamnogalacturonase genes have been lost in most of the biotrophic and hemibiotrophic plant pathogens investigated but are common in necrotrophic pathogens and saprophytic fungi. Diversity and distribution of fungal endo-rhamnogalacturonase in fungi with different lifestyle, overview Heterobasidion irregulare
physiological function endo-rhamnogalacturonase of Heterobasidion irregulare mediates growth on pectin Heterobasidion irregulare