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Literature summary for 3.1.1.117 extracted from

  • Krska, D.; Larsbrink, J.
    Investigation of a thermostable multi-domain xylanase-glucuronoyl esterase enzyme from Caldicellulosiruptor kristjanssonii incorporating multiple carbohydrate-binding modules (2020), Biotechnol. Biofuels, 13, 68 .
    View publication on PubMedView publication on EuropePMC

Application

Application Comment Organism
synthesis due to its thermostability, enzyme CkXyn10C-GE15A is a promising candidate for industrial processes, with both catalytic domains exhibiting melting temperatures over 70°C. Of particular interest is the glucuronoyl esterase domain, as it represents the first studied thermostable enzyme displaying this activity Caldicellulosiruptor acetigenus

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
8.6
-
benzyl-D-glucuronate pH 7.5, 40°C Caldicellulosiruptor acetigenus
18.5
-
benzyl-D-glucuronate pH 7.5, 22°C Caldicellulosiruptor acetigenus

Localization

Localization Comment Organism GeneOntology No. Textmining
cell wall the enzyme is anchored to the cell wall by its C-terminal surface layer homology (SLH)-domains, overview Caldicellulosiruptor acetigenus 5618
-

Organism

Organism UniProt Comment Textmining
Caldicellulosiruptor acetigenus
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
allyl-D-glucuronate + H2O
-
Caldicellulosiruptor acetigenus prop-2-en-1-ol + glucuronic acid
-
?
benzyl-D-glucuronate + H2O
-
Caldicellulosiruptor acetigenus benzyl alcohol + D-glucuronic acid
-
?
methyl-D-glucuronate + H2O low activity Caldicellulosiruptor acetigenus methanol + glucuronic acid
-
?
additional information no activity is detected with methyl-D-galacturonate, indicating that CkGE15A has a strict preference for GlcA-derived esters Caldicellulosiruptor acetigenus ?
-
-

Subunits

Subunits Comment Organism
More domain architecture of CkXyn10C-GE15A with ten domains: enzyme CkXyn10C-GE15A contains two distinct putative catalytic modules: a GH10 xylanase and a GE from CE15. In addition, two N-terminal CBM22 domains as well as three CBM9 domains sandwiched between the catalytic domains are predicted, as well as a cadherin-like domain and two surface layer homology (SLH) domains following the GE domain at the C-terminus Caldicellulosiruptor acetigenus

Synonyms

Synonyms Comment Organism
CkXyn10C-GE15A
-
Caldicellulosiruptor acetigenus
dual-function xylanase-glucuronoyl esterase enzyme
-
Caldicellulosiruptor acetigenus
More cf. EC 3.2.1.8 Caldicellulosiruptor acetigenus
multi-domain xylanase-glucuronoyl esterase
-
Caldicellulosiruptor acetigenus

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
22 40 assay at Caldicellulosiruptor acetigenus

Temperature Range [°C]

Temperature Minimum [°C] Temperature Maximum [°C] Comment Organism
22 40 assay at, the activity at 40°C is about 6fold higher compared to 22°C Caldicellulosiruptor acetigenus

Temperature Stability [°C]

Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
72
-
enzyme melting temperature Caldicellulosiruptor acetigenus

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
0.0197
-
benzyl-D-glucuronate pH 7.5, 22°C Caldicellulosiruptor acetigenus
0.0565
-
benzyl-D-glucuronate pH 7.5, 40°C Caldicellulosiruptor acetigenus

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7
-
with benzyl-D-glucuronate Caldicellulosiruptor acetigenus

General Information

General Information Comment Organism
additional information as there are no bacterial CBM1 modules, it is possible that the CBM9 modules present in CkXyn10C-GE15A are performing a similar function as the CBM1 modules would in fungal enzymes Caldicellulosiruptor acetigenus
physiological function the thermostable, dual-function enzyme CkXyn10C-GE15A from the hyperthermophilic bacterium Caldicellulosiruptor kristjanssonii shows xylanase as well as glucuronoyl esterase activities. Although the enzyme domains are naturally linked together, when added separately to biomass, the expected boosting of the xylanase action is not seen. This lack of intramolecular synergy might suggest, that increased xylose release is not the main beneficial trait given by glucuronoyl esterases Caldicellulosiruptor acetigenus

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
0.0011
-
benzyl-D-glucuronate pH 7.5, 22°C Caldicellulosiruptor acetigenus
0.0066
-
benzyl-D-glucuronate pH 7.5, 40°C Caldicellulosiruptor acetigenus