BRENDA - Enzyme Database
show all sequences of 2.7.1.19

Purification, some catalytic and molecular properties of phosphoribulokinase from Alcaligenes eutrophus

Siebert, K.; Schobert, P.; Bowien, B.; Biochim. Biophys. Acta 658, 35-44 (1981)

Data extracted from this reference:

Metals/Ions
Metals/Ions
Commentary
Organism
Structure
Ca2+
can partially replace Mg2+
Cupriavidus necator
Co2+
can partially replace Mg2+
Cupriavidus necator
Mg2+
required
Cupriavidus necator
Mn2+
can partially replace Mg2+
Cupriavidus necator
additional information
not activated by Ni2+
Cupriavidus necator
Molecular Weight [Da]
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
33000
-
8 * 33000, subunits of identical size, SDS-PAGE
Cupriavidus necator
252000
256000
sedimentation equilibrium centrifugation, gel filtration
Cupriavidus necator
Natural Substrates/ Products (Substrates)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
D-ribulose 5-phosphate + ATP
Cupriavidus necator
-
D-ribulose 1,5-diphosphate + ADP
-
-
?
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Cupriavidus necator
-
basonym Alcaligenes eutrophus
-
Purification (Commentary)
Commentary
Organism
homogeneity
Cupriavidus necator
Specific Activity [micromol/min/mg]
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
additional information
-
-
Cupriavidus necator
7.59
-
-
Cupriavidus necator
Storage Stability
Storage Stability
Organism
0-4°C, no significant loss of activity after 1 month
Cupriavidus necator
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
D-fructose 6-phosphate + ATP
3.6% of ribulose 5-phosphate activity
641023
Cupriavidus necator
?
-
-
-
?
D-ribulose 5-phosphate + ATP
-
641023
Cupriavidus necator
D-ribulose 1,5-diphosphate + ADP
-
-
-
?
D-ribulose 5-phosphate + ATP
ATP can be substituted by UTP with reduced activity
641023
Cupriavidus necator
D-ribulose 1,5-diphosphate + ADP
-
-
-
?
D-ribulose 5-phosphate + ATP
ATP can be substituted by GTP with reduced activity
641023
Cupriavidus necator
D-ribulose 1,5-diphosphate + ADP
-
-
-
?
sedoheptulose 7-phosphate + ATP
2.5% of ribulose 5-phosphate activity
641023
Cupriavidus necator
?
-
-
-
?
Subunits
Subunits
Commentary
Organism
octamer
8 * 33000, subunits of identical size, SDS-PAGE
Cupriavidus necator
pH Optimum
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
8.6
-
-
Cupriavidus necator
Cofactor
Cofactor
Commentary
Organism
Structure
NADH
activation
Cupriavidus necator
Cofactor (protein specific)
Cofactor
Commentary
Organism
Structure
NADH
activation
Cupriavidus necator
Metals/Ions (protein specific)
Metals/Ions
Commentary
Organism
Structure
Ca2+
can partially replace Mg2+
Cupriavidus necator
Co2+
can partially replace Mg2+
Cupriavidus necator
Mg2+
required
Cupriavidus necator
Mn2+
can partially replace Mg2+
Cupriavidus necator
additional information
not activated by Ni2+
Cupriavidus necator
Molecular Weight [Da] (protein specific)
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
33000
-
8 * 33000, subunits of identical size, SDS-PAGE
Cupriavidus necator
252000
256000
sedimentation equilibrium centrifugation, gel filtration
Cupriavidus necator
Natural Substrates/ Products (Substrates) (protein specific)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
D-ribulose 5-phosphate + ATP
Cupriavidus necator
-
D-ribulose 1,5-diphosphate + ADP
-
-
?
Purification (Commentary) (protein specific)
Commentary
Organism
homogeneity
Cupriavidus necator
Specific Activity [micromol/min/mg] (protein specific)
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
additional information
-
-
Cupriavidus necator
7.59
-
-
Cupriavidus necator
Storage Stability (protein specific)
Storage Stability
Organism
0-4°C, no significant loss of activity after 1 month
Cupriavidus necator
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
D-fructose 6-phosphate + ATP
3.6% of ribulose 5-phosphate activity
641023
Cupriavidus necator
?
-
-
-
?
D-ribulose 5-phosphate + ATP
-
641023
Cupriavidus necator
D-ribulose 1,5-diphosphate + ADP
-
-
-
?
D-ribulose 5-phosphate + ATP
ATP can be substituted by UTP with reduced activity
641023
Cupriavidus necator
D-ribulose 1,5-diphosphate + ADP
-
-
-
?
D-ribulose 5-phosphate + ATP
ATP can be substituted by GTP with reduced activity
641023
Cupriavidus necator
D-ribulose 1,5-diphosphate + ADP
-
-
-
?
sedoheptulose 7-phosphate + ATP
2.5% of ribulose 5-phosphate activity
641023
Cupriavidus necator
?
-
-
-
?
Subunits (protein specific)
Subunits
Commentary
Organism
octamer
8 * 33000, subunits of identical size, SDS-PAGE
Cupriavidus necator
pH Optimum (protein specific)
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
8.6
-
-
Cupriavidus necator
Other publictions for EC 2.7.1.19
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
721514
Kane
Daphnetin methylation stabiliz ...
Triticum aestivum
Biochem. Cell Biol.
90
657-666
2012
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2
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1
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1
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723039
Soule
Light-regulated photosynthetic ...
Elysia chlorotica, Vaucheria litorea
J. Phycol.
48
373-383
2012
1
-
-
-
-
-
1
-
2
-
-
-
-
5
-
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2
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2
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2
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723160
Avilan
CP12 residues involved in the ...
Chlamydomonas reinhardtii
Mol. Biosyst.
8
2994-3002
2012
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1
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1
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1
1
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704897
Maberly
Phylogenetically-based variati ...
Alexandrium minutum, Asterionella formosa 18, Asterionella formosa 19, Asterionella formosa, Aulacoseira granulata, Bumilleriopsis peterseniana, Chlamydomonas reinhardtii, Cyanophora paradoxa, Dinobryon sociale, Emiliania huxleyi, Euglena gracilis, Fistulifera pelliculosa, Hemiselmis rufescens, Mallomonas caudata, Porphyridium purpureum, Pseudocharaciopsis ovalis, Staurastrum cingulum, Thalassiosira pseudonana
J. Exp. Bot.
61
735-745
2009
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16
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-
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21
-
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18
-
18
-
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-
-
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-
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16
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18
-
18
-
-
-
-
-
-
-
-
-
27
16
16
27
-
-
705819
Rumpho
Molecular characterization of ...
Vaucheria litorea
Mol. Plant
2
1384-1396
2009
-
-
1
-
-
-
-
-
3
-
1
-
-
4
-
-
-
-
-
-
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1
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1
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1
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3
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1
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1
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1
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1
1
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-
705821
Marri
Prompt and easy activation by ...
Arabidopsis thaliana
Mol. Plant
2
259-269
2009
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1
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1
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2
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1
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1
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1
1
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686688
Erales
Exploring CP12 binding protein ...
Chlamydomonas reinhardtii
FEBS J.
275
1248-1259
2008
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1
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2
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1
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698576
Swingley
The complete genome sequence o ...
no activity in Roseobacter denitrificans OCh 114
J. Bacteriol.
189
683-690
2007
-
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3
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675479
Petersen
A 'green' phosphoribulokinase ...
Chondrus crispus, Euglena gracilis, Guillardia theta, Lingulodinium polyedra, Pavlova lutheri, Pavlova lutheri 926-1, Prymnesium parvum 127.79, Prymnesium parvum, Pyrocystis lunula
J. Mol. Evol.
62
143-157
2006
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11
-
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19
-
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7
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7
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7
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11
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7
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676674
Anderson
-
Enzyme co-localization with tr ...
Pisum sativum
Plant Sci.
171
686-698
2006
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1
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677023
Runquist
Functional contribution of a c ...
Rhodobacter sphaeroides
Protein Sci.
15
837-842
2006
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1
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5
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2
5
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2
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1
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677110
Babadzhanova
-
Developmental changes in the a ...
Gossypium hirsutum
Russ. J. Plant Physiol.
53
32-38
2006
1
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1
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656414
Marri
Co-ordinated gene expression o ...
Arabidopsis thaliana
J. Exp. Bot.
56
73-80
2005
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2
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661234
Dani
Isolation and characterization ...
Synechococcus elongatus PCC 7942
Biochim. Biophys. Acta
1669
43-52
2005
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663139
Michels
Diatom plastids possess a phos ...
Spinacia oleracea, Trieres chinensis
Plant Physiol.
137
911-920
2005
3
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1
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5
2
3
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1
2
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11
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1
1
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4
1
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1
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5
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2
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1
1
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4
1
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2
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663144
Marri
Reconstitution and properties ...
Arabidopsis thaliana
Plant Physiol.
139
1433-1443
2005
2
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1
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1
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2
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3
1
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2
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2
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2
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641046
Koyabashi
Molecular characterization and ...
Synechococcus sp., Synechococcus sp. PCC 7942
Plant Cell Physiol.
44
269-276
2003
1
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1
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2
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24
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662126
Lebreton
Modulation, via protein-protei ...
Chlamydomonas reinhardtii
J. Biol. Chem.
278
12078-12084
2003
2
-
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2
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1
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1
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1
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1
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2
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1
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1
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641048
Mouche
Striking conformational change ...
Chlamydomonas reinhardtii
J. Biol. Chem.
277
6743-6749
2002
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1
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1
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641050
Runquist
Functional evaluation of serin ...
Rhodobacter sphaeroides
Biochemistry
400
14530-14537
2001
-
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1
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4
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1
5
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1
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2
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1
1
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641043
Avilan
Thioredoxin activation of phos ...
Chlamydomonas reinhardtii, Chlamydomonas reinhardtii WM3-
J. Biol. Chem.
275
9447-9451
2000
1
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2
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641044
Geck
Kinetic and mutational analyse ...
Spinacia oleracea
J. Biol. Chem.
275
18034-18039
2000
4
-
-
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1
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2
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641047
Miziorko
Phosphoribulokinase: current p ...
Acidovorax facilis, Chlamydomonas reinhardtii, Chlorogloeopsis fritschii, Cupriavidus necator, Halothiobacillus neapolitanus, Heterosigma akashiwo, Nitrobacter winogradskyi, Rhodobacter capsulatus, Rhodobacter sphaeroides, Rhodoblastus acidophilus, Spinacia oleracea
Adv. Enzymol. Relat. Areas Mol. Biol.
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95-127
2000
5
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2
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6
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3
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11
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2
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10
14
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6
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3
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10
14
-
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641049
Runquist
Rhodobacter sphaeroides phosph ...
Rhodobacter sphaeroides
Biochemistry
38
13999-14005
1999
-
-
1
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3
-
2
3
-
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2
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1
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2
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1
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6
-
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1
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3
-
-
2
6
3
-
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1
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-
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2
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
641038
Hirasawa
Oxidation-reduction properties ...
Spinacia oleracea
Arch. Biochem. Biophys.
350
127-131
1998
-
-
-
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2
-
-
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2
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2
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-
-
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-
-
-
-
-
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641039
Harrison
The crystal structure of phosp ...
Rhodobacter sphaeroides
Biochemistry
37
5074-5085
1998
-
-
1
1
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1
-
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-
-
-
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-
641045
Hariharan
Purification and characterizat ...
Heterosigma akashiwo
Plant Physiol.
117
321-329
1998
1
-
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-
-
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2
-
-
2
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2
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1
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1
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1
1
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1
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2
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1
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1
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1
1
-
-
-
-
-
-
-
-
-
-
-
-
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-
641051
Wadano
-
Reaction mechanism of phosphor ...
Synechococcus sp.
Photosyn. Res.
56
27-33
1998
-
-
-
-
-
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3
2
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-
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1
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1
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1
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4
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3
4
2
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1
-
1
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-
-
-
-
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-
-
-
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-
-
-
-
641052
Runquist
Functional evaluation of invar ...
Rhodobacter sphaeroides
Biochemistry
37
1221-1226
1998
-
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1
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4
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5
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2
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1
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1
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4
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2
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-
-
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-
641040
Runquist
Rhodobacter sphaeroides phosph ...
Rhodobacter sphaeroides
Biochemistry
35
15049-15056
1996
1
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1
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2
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2
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2
-
1
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-
-
-
-
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-
-
-
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-
641041
Roberts
Crystallization and preliminar ...
Rhodobacter sphaeroides
Protein Sci.
4
2442-2443
1995
-
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1
1
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3
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641042
Wadano
Purification and characterizat ...
Synechococcus sp., Synechococcus sp. PCC 7942
Plant Cell Physiol.
36
1381-1385
1995
-
-
-
-
-
-
-
-
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2
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22
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1
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1
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1
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1
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641031
Saharan
-
Purification and characterizat ...
Brassica sp.
J. Plant Biochem. Biotechnol.
2
121-124
1993
2
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3
2
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3
5
1
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1
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1
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1
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1
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1
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2
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5
1
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1
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1
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1
1
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-
-
-
1
-
-
-
-
-
-
-
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-
641015
Lin
Purification and molecular and ...
Monoraphidium minutum
Plant Physiol.
98
82-88
1992
-
-
-
-
-
-
-
-
-
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3
1
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7
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1
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1
1
2
1
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1
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3
1
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1
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1
1
2
1
-
-
-
-
-
-
-
1
-
-
-
-
-
-
641016
Roesler
Chlamydomonas reinhardtii phos ...
Chlamydomonas reinhardtii
Plant Physiol.
93
188-193
1990
-
-
-
-
-
-
-
2
-
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1
1
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5
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1
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1
1
1
1
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1
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2
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1
1
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-
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1
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1
1
1
1
-
-
-
-
-
-
-
1
-
-
-
-
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-
641017
Serra
-
Purification and characterizat ...
Anabaena cylindrica
Plant Sci.
59
1-9
1989
1
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-
-
-
-
-
2
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3
3
1
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1
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1
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2
1
4
1
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1
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1
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-
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2
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3
3
1
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1
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2
1
4
1
-
-
-
-
1
-
-
-
-
-
-
-
-
-
641034
Krieger
Spinach leaf ribulose-5-phosph ...
Spinacia oleracea
Arch. Biochem. Biophys.
256
362-371
1987
-
-
-
-
-
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1
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1
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2
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2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
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641018
Porter
Purification and characterizat ...
Spinacia oleracea
Arch. Biochem. Biophys.
245
14-23
1986
-
-
-
-
-
-
-
-
1
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2
1
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2
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1
-
-
1
2
1
1
1
-
-
-
-
-
-
-
-
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-
-
-
-
-
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-
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1
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2
1
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1
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1
2
1
1
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
641019
Lazaro
Characterisation of two forms ...
Tetradesmus obliquus
Eur. J. Biochem.
156
423-429
1986
-
-
-
-
-
-
-
-
-
-
4
1
-
2
-
-
1
-
-
-
2
-
1
2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
4
1
-
-
-
1
-
-
2
-
1
2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
641020
Surek
Purification and characterizat ...
Triticum aestivum
Planta
165
507-512
1985
-
-
-
-
-
-
1
2
-
-
1
1
-
2
-
-
1
-
-
1
1
1
1
1
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
2
-
-
1
1
-
-
-
1
-
1
1
1
1
1
-
-
-
-
1
-
-
-
-
-
-
-
-
-
641021
Rippel
-
Phosphoribulokinase from Rhodo ...
Rhodoblastus acidophilus, Rhodoblastus acidophilus 1150
Arch. Microbiol.
139
207-212
1984
1
-
-
-
-
-
1
-
-
1
1
2
-
2
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-
1
-
-
-
1
1
10
-
-
-
-
-
2
-
-
1
-
-
-
1
-
-
1
-
-
-
-
1
-
-
-
1
1
2
-
-
-
1
-
-
1
1
10
-
-
-
-
-
2
-
-
-
-
-
-
-
-
-
641022
Siebert
-
Evidence for an octameric stru ...
Cupriavidus necator
Biochim. Biophys. Acta
787
208-214
1984
-
-
-
-
-
-
-
-
-
-
1
1
-
1
-
-
-
-
-
-
-
-
1
1
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-
-
-
-
-
-
-
-
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-
-
-
-
-
-
-
-
-
-
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-
1
1
-
-
-
-
-
-
-
-
1
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
641024
Marsden
-
Purification and molecular and ...
Chlorogloeopsis fritschii
J. Gen. Microbiol.
130
999-1006
1984
3
-
-
-
-
-
8
-
-
3
2
1
-
1
-
-
1
-
-
-
1
1
1
1
-
-
-
-
1
-
-
1
-
-
-
3
-
-
1
-
-
-
-
8
-
-
-
3
2
1
-
-
-
1
-
-
1
1
1
1
-
-
-
-
1
-
-
-
-
-
-
-
-
-
641025
Berhow
Ribulose 1,5-bisphosphate carb ...
Prochloron didemni
Planta
158
281-287
1983
-
-
-
-
-
-
-
-
-
-
3
1
-
4
-
-
-
-
-
-
1
-
2
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
3
1
-
-
-
-
-
-
1
-
2
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
641033
Kagawa
-
Isolation and purification of ...
Nicotiana glutinosa
Methods in Chloroplast and Molecular Biology (Edelman, M. , Hallick, R. B. , Chua, M. eds.) Elsevier Biomedical Press
695-705
1982
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
641023
Siebert
Purification, some catalytic a ...
Cupriavidus necator
Biochim. Biophys. Acta
658
35-44
1981
-
-
-
-
-
-
-
-
-
5
2
1
-
2
-
-
1
-
-
-
2
1
5
1
-
-
-
-
1
-
-
1
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
5
2
1
-
-
-
1
-
-
2
1
5
1
-
-
-
-
1
-
-
-
-
-
-
-
-
-
641026
Tabita
Pyridine nucleotide control an ...
Anabaena sp., Chlorella sorokiniana, Phaeospirillum molischianum, Rhodobacter capsulatus, Rhodobacter sphaeroides, Rhodocyclus tenuis, Rhodomicrobium vannielii, Rhodopseudomonas palustris, Rhodospirillum rubrum, Synechococcus sp. PCC 7002
J. Bacteriol.
143
1275-1280
1980
10
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13
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1
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-
-
1
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9
1
-
-
-
-
-
-
-
-
-
-
-
10
-
-
-
-
-
-
-
-
-
-
-
-
2
9
-
-
-
1
-
-
1
-
9
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
641036
Kiesow
Phosphoribulokinase from Nitro ...
Nitrobacter winogradskyi
J. Bacteriol.
130
20-25
1977
-
-
-
-
-
-
1
-
-
-
-
-
-
4
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
1
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
641027
Slabas
Inhibition of spinach phosphor ...
Spinacia oleracea
Biochem. J.
153
613-619
1976
-
-
-
-
-
-
1
2
1
-
-
1
-
2
-
-
1
-
-
1
-
-
1
-
-
-
-
-
-
-
-
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1
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641028
Abdelal
Separation of phosphoribulokin ...
Cupriavidus necator
Arch. Microbiol.
95
139-143
1974
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1
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641029
Abdelal
Purification and regulatory pr ...
Cupriavidus necator
Biochem. J.
139
481-489
1974
1
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2
1
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641032
Lavergne
-
Simultaneous purification of t ...
Spinacia oleracea
Plant Sci. Lett.
1
229-236
1973
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641030
MacElroy
Properties of phosphoribulokin ...
Halothiobacillus neapolitanus
J. Bacteriol.
112
532-538
1972
4
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641035
Joint
Purification of a complex of a ...
Rhodospirillum rubrum
J. Biol. Chem.
247
4833-4838
1972
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641037
Hart
Ribulose-5-phosphate kinase fr ...
Chromatium sp., Chromatium sp. D
Arch. Biochem. Biophys.
144
308-321
1971
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10
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641014
Hurwitz
Spinach phosphoribulokinase ...
Spinacia oleracea
J. Biol. Chem.
218
769-783
1956
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