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Literature summary for 2.3.2.31 extracted from

  • Pao, K.C.; Stanley, M.; Han, C.; Lai, Y.C.; Murphy, P.; Balk, K.; Wood, N.T.; Corti, O.; Corvol, J.C.; Muqit, M.M.; Virdee, S.
    Probes of ubiquitin E3 ligases enable systematic dissection of parkin activation (2016), Nat. Chem. Biol., 12, 324-331 .
    View publication on PubMedView publication on EuropePMC

Application

Application Comment Organism
analysis development of activity-based probes by reengineering of a ubiquitin-charged E2 conjugating enzyme using tosyl-substituted doubly activated genes and application in profiling the transthiolation activity of the RBR E3 ligase Parkin in vitro and in cellular extracts Homo sapiens
medicine parkin patient disease-associated mutation largely mediate their effect by altering transthiolation activity Homo sapiens

Protein Variants

Protein Variants Comment Organism
A46P parkin disease mutant, loss of activity Homo sapiens
C431F parkin disease mutant, loss of activity Homo sapiens
G430D parkin disease mutant, loss of activity Homo sapiens
K161N parkin disease mutant, loss of activity Homo sapiens
K211N parkin disease mutant, loss of activity Homo sapiens
K27N parkin disease mutant, 0.7fold reduction in activity Homo sapiens
R275W parkin disease mutant, loss of activity Homo sapiens
R42P parkin disease mutant, 2.2fold activation of activity Homo sapiens
S65A parkin disease mutant, loss of activity Homo sapiens
T415N parkin disease mutant, loss of activity Homo sapiens

Organism

Organism UniProt Comment Textmining
Homo sapiens O60260
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-

Source Tissue

Source Tissue Comment Organism Textmining
neuron endogenous Parkin is activated in neuronal cell lines in response to mitochondrial depolarization Homo sapiens
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Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
[E2 ubiquitin-conjugating enzyme UBE2L3]-S-ubiquitinyl-L-cysteine + [Miro1]-L-lysine
-
Homo sapiens [E2 ubiquitin-conjugating enzyme UBE2L3]-L-cysteine + [Miro1]-N6-ubiquitinyl-L-lysine
-
?

Synonyms

Synonyms Comment Organism
Parkin
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Homo sapiens