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Literature summary for 1.14.99.69 extracted from

  • Carpentier, P.; Lepretre, C.; Basset, C.; Douki, T.; Torelli, S.; Duarte, V.; Hamdane, D.; Fontecave, M.; Atta, M.
    Structural, biochemical and functional analyses of tRNA-monooxygenase enzyme MiaE from Pseudomonas putida provide insights into tRNA/MiaE interaction (2020), Nucleic Acids Res., 48, 9918-9930 .
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
expression in Escherichia coli Pseudomonas putida

Crystallization (Commentary)

Crystallization (Comment) Organism
structure by molecular replacement. MiaE consists of a catalytic diiron(III) domain with a four alpha-helix bundle fold. In the asymmetric unit, two MiaE monomers intertwine to form a homodimer. A narrow and very deep channel runs through the four-alpha-helix bundle from the surface of the protein to the diiron cluster Pseudomonas putida

Metals/Ions

Metals/Ions Comment Organism Structure
Iron the diiron active site is buried within the center of the four-alpha-helix bundle. The calculated Fe-Fe distances of 3.19 and 3.24 A are consistent with a diferric state Pseudomonas putida

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
50000
-
gel filtration Pseudomonas putida

Organism

Organism UniProt Comment Textmining
Pseudomonas putida Q88KV1
-
-
Pseudomonas putida DSM6125 Q88KV1
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
N6-(3-methylbut-2-en-1-yl)-2-(methylsulfanyl)adenosine37 in tRNA + reduced acceptor + O2
-
Pseudomonas putida N6-[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]-2-(methylsulfanyl)adenosine37 in tRNA + acceptor + H2O
-
?
N6-(3-methylbut-2-en-1-yl)-2-(methylsulfanyl)adenosine37 in tRNA + reduced acceptor + O2
-
Pseudomonas putida DSM6125 N6-[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]-2-(methylsulfanyl)adenosine37 in tRNA + acceptor + H2O
-
?

Subunits

Subunits Comment Organism
dimer 2 * 24000, SDS-PAGE Pseudomonas putida

Synonyms

Synonyms Comment Organism
miaE
-
Pseudomonas putida
PP2188
-
Pseudomonas putida