Metals/Ions | Comment | Organism | Structure |
---|---|---|---|
Fe2+ | coordination geometry of Fe-ion along with the oxygen and different polychlorinated biphenyl congeners | Comamonas testosteroni |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Comamonas testosteroni | Q46372 | alpha-subunit of biphenyl dioxygenase; B-356 | - |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
3,3'-dichlorobiphenyl + NADH + H+ + O2 | - |
Comamonas testosteroni | 5,6-dihydroxy-1-phenylcyclohexa-1,3-diene + 4,5-dihydroxy-1-phenylcyclohexa-1,2-diene + NAD+ + HCl | - |
? | |
4,4'-dichlorobiphenyl + NADH + H+ + O2 | - |
Comamonas testosteroni | 2,3-dihydroxy-4,4'-dichlorobiphenyl + NAD+ | - |
? | |
biphenyl + NADH + H+ + O2 | - |
Comamonas testosteroni | 2,3-dihydro-dihydroxybiphenyl + NAD+ | - |
? |
Subunits | Comment | Organism |
---|---|---|
? | construction of a three-dimensional model of alpha-subunit of biphenyl dioxygenase (BphA). BphA active site is composed of two domains, the catalytic domain (residues 1-58 and 176-457) and the Rieske domain (residues 59–166). The active site pocket, which is lined mostly by hydrophobic residues (Phe227, Trp390, Phe 376, Asp386, Phe382 and Ala234) is located between the core beta-sheet and alpha-helices in the catalytic domain of the alpha-subunit | Comamonas testosteroni |
Synonyms | Comment | Organism |
---|---|---|
biphenyl dioxygenase | - |
Comamonas testosteroni |
biphenyl-2,3-dioxygenase | - |
Comamonas testosteroni |
BPDO | - |
Comamonas testosteroni |
BphA | - |
Comamonas testosteroni |
Cofactor | Comment | Organism | Structure |
---|---|---|---|
NADH | - |
Comamonas testosteroni |