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EC Number Crystallization (Commentary)
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2-
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2active, truncated TrpRS lacking the N-terminal domain, sitting drop vapor diffusion at room temperature, 0.00015 ml of 24.7-32.1 mg/ml protein in 0.5 M NaCl, 25 mM HEPES, pH 7.5, 5% glycerol, and 0.025% Na-azide plus 10 mM ATP, 1 mM TCEP, 10 mM MgCl2, 2 mM L-tryptophan, is mixed with 0.00015 ml of reservoir solution containing 0.2 M MgCl2, 0.1 M Bis-Tris, pH 6.2, and 28% w/v PEG 3350, X-ray diffraction structure determination and analysis at 2.4 A resolution
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2catalytic fragment, hanging drop method, 0.002 ml protein solution: 8 mg/ml protein, 20 mM Tris-potassium phosphate, pH 6.8, 10 mM MgCl2, 5 mM 2-mercaptoethanol, plus equal volume of reservoir solution: 16% w/v polyethylene glycol 1500, 4% polyehylene glycol 3350, 0.2 M trisodium citrate dihydrate, pH 8.2, plus 0.0005 ml 30% 2-methyl-2,4-pentanediol, 7-10 days, 4°C, proteolytic cleavage of the enzyme into 2 fragments occurs during the crystallization process, X-ray diffraction structure determination at 2.5 A resolution using the MAD method, and analysis
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2crystal structure determination at 2.1 A resolution of the enzyme with a tryptophanyladenylate bound at the active site, cocrystal structure determination at 1.6 A resolution of an active fragment of the enzyme with its cognate amino acid analogue
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2crystal structure of drTrpRS II without ligands and in complex with ATP, hanging drop vapor diffusion method at 25°C
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2crystal structure of hTrpRS in complexes with Trp, tryptophanamide and ATP and tryptophanyl-AMP, respectively, are all determined at 2.4 A resolution
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2crystallization of native enzyme and selenomethionyl enzyme complexed with ATP, L-tryptophan and analogue indolmycin by microdialysis, formation of high-affinity or low-affinity complexes with ATP at 1 mM and 10 mM, respectively, for microclinic crystals: 0.002 ml enzyme solution, containing 4 mg/ml protein and 50% v/v glycerol, plus 2 ml well solution, 42°C, 2 M potassium phosphate, pH 6.6, 20 mM MgCl2, and 2 mM tryptophan or 1 mM ATP, for tetragonal crystals: 35°C, precipitant solution containing 1 M sodium citrate, 10 mM ATP, 10 mM MgCl2, 0.05 mM tryptophanamide, crystal growth within 1 week, X-ray diffraction structure determination at 2.3 A for the selenomethionyl-enzyme and 2.2 A for the native enzyme, structural data and analysis
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2crystals of native mini TrpRS are obtained by hanging-drop vapor diffusion at 4°C, crystal structure of human mini TrpRS is determined at a resolution of 2.3 A
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2cytosolic isoform, sitting drop vapor diffusion at room temperature, 0.0001 ml of 13.2 mg/ml protein in 0.5 M NaCl, 25 mM HEPES, pH 7.5, 5% glycerol, and 0.025% Na-azide is mixed with 0.0002 ml of reservoir solution containing 0.2 M Na-citrate, and 20% w/v PEG 3350, X-ray diffraction structure determination and analysis at 2.8 A resolution
Show all pathways known for 6.1.1.2Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.2cytosolic isoform, sitting drop vapor diffusion at room temperature, 0.0001 ml of 17.8 mg/ml protein in 0.5 M NaCl, 25 mM HEPES, pH 7.5, 5% glycerol, and 0.025% Na-azide plus 1mM tris(2-carboxyethyl)phosphine is mixed with 0.0002 ml of reservoir solution containing 0.2 M Na malonate, pH 7.0, and 20% w/v PEG 3350. triclinic crystals X-ray diffraction structure determination and analysis at 2.8 A resolution
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